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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0011.Seq
         (844 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81523-2|CAB04248.1|  928|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z81523-1|CAB04241.1|  944|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z82285-9|CAB05303.1|  513|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z82264-13|CAB05168.1|  513|Caenorhabditis elegans Hypothetical p...    29   4.1  
AL132952-25|CAB63388.1|  513|Caenorhabditis elegans Hypothetical...    29   4.1  
AL132846-9|CAB63368.1|  513|Caenorhabditis elegans Hypothetical ...    29   4.1  
Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical p...    28   7.2  
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AC025726-6|AAK73923.2|  238|Caenorhabditis elegans Hypothetical ...    28   7.2  
AC006680-2|AAK72302.1|  309|Caenorhabditis elegans Serpentine re...    28   9.5  

>Z81523-2|CAB04248.1|  928|Caenorhabditis elegans Hypothetical
           protein F32H2.1b protein.
          Length = 928

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/45 (31%), Positives = 17/45 (37%)
 Frame = +3

Query: 243 GPGTNSPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASW 377
           G  T       +YN L     +  W N  V +L  L   P F SW
Sbjct: 229 GSRTEWAVKSKWYNELNPKWNKEHWSNEEVEKLKYLRESPKFVSW 273


>Z81523-1|CAB04241.1|  944|Caenorhabditis elegans Hypothetical
           protein F32H2.1a protein.
          Length = 944

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/45 (31%), Positives = 17/45 (37%)
 Frame = +3

Query: 243 GPGTNSPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASW 377
           G  T       +YN L     +  W N  V +L  L   P F SW
Sbjct: 229 GSRTEWAVKSKWYNELNPKWNKEHWSNEEVEKLKYLRESPKFVSW 273


>Z82285-9|CAB05303.1|  513|Caenorhabditis elegans Hypothetical
           protein T28F3.9 protein.
          Length = 513

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 252 TNSPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAH 359
           TN   +E YY  +  V+  +D +NPG   LN   +H
Sbjct: 470 TNIKMNEKYYEEMVTVIYHKDHKNPGY-HLNCTPSH 504


>Z82264-13|CAB05168.1|  513|Caenorhabditis elegans Hypothetical
           protein T28F3.9 protein.
          Length = 513

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 252 TNSPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAH 359
           TN   +E YY  +  V+  +D +NPG   LN   +H
Sbjct: 470 TNIKMNEKYYEEMVTVIYHKDHKNPGY-HLNCTPSH 504


>AL132952-25|CAB63388.1|  513|Caenorhabditis elegans Hypothetical
           protein Y51H4A.25a protein.
          Length = 513

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 252 TNSPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAH 359
           TN   +E YY  +  V+  +D +NPG   LN   +H
Sbjct: 470 TNIKLNEKYYEEMVTVIYHKDHKNPGY-HLNCTPSH 504


>AL132846-9|CAB63368.1|  513|Caenorhabditis elegans Hypothetical
           protein Y51H4A.25a protein.
          Length = 513

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 252 TNSPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAH 359
           TN   +E YY  +  V+  +D +NPG   LN   +H
Sbjct: 470 TNIKLNEKYYEEMVTVIYHKDHKNPGY-HLNCTPSH 504


>Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical
           protein K08E7.5c protein.
          Length = 896

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = +3

Query: 243 GPGTNSPYSESYYNSLAVVLQRRD---WENPGVTQLNRLAAHPPFASWRNSEEARTDRPS 413
           GPGT S YSE    S A    + D   +E P   + +    +P  +SW + + A    PS
Sbjct: 332 GPGTESGYSEPKALSTASQKTKPDDKPYEIPRSIEPSNSKPYPSDSSWSDHDNAPGSEPS 391


>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
           protein K08E7.5a protein.
          Length = 1221

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = +3

Query: 243 GPGTNSPYSESYYNSLAVVLQRRD---WENPGVTQLNRLAAHPPFASWRNSEEARTDRPS 413
           GPGT S YSE    S A    + D   +E P   + +    +P  +SW + + A    PS
Sbjct: 657 GPGTESGYSEPKALSTASQKTKPDDKPYEIPRSIEPSNSKPYPSDSSWSDHDNAPGSEPS 716


>AC025726-6|AAK73923.2|  238|Caenorhabditis elegans Hypothetical
           protein Y71G12B.22 protein.
          Length = 238

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 18/75 (24%), Positives = 34/75 (45%)
 Frame = +1

Query: 463 FVKIRVKFLLNQLIFYQ*AEIGKIPYKSKE*TEIGLSVVPSLEQESTFKERGLQRPXAKN 642
           F  + + F  N+++  +  E+G++  +  E   +G  VVPSL + +  +   +    AK 
Sbjct: 138 FTALEMIFAKNEMMLKEEIEVGRLNSEWNEPLPVGQEVVPSLPRGNNAQIPRIMLNVAKE 197

Query: 643 RLSGRXATTGNHHPN 687
           R+    A   N   N
Sbjct: 198 RIRSLVARPINSVKN 212


>AC006680-2|AAK72302.1|  309|Caenorhabditis elegans Serpentine
           receptor, class x protein9 protein.
          Length = 309

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 52  KFSIYLYVYFKYNANSLCLFRICFTYYACILDDFY 156
           K SIY+  +F   ++ L LF +CF +   I+ D Y
Sbjct: 38  KSSIYVIAFFNIISDLLQLFYLCFYFSLSIIIDQY 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,099,292
Number of Sequences: 27780
Number of extensions: 356075
Number of successful extensions: 620
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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