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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0046.Seq
         (760 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039038-8|AAM81097.1|  874|Caenorhabditis elegans Hypothetical ...    32   0.38 
AF039038-7|AAM81098.1|  942|Caenorhabditis elegans Hypothetical ...    32   0.38 
AL117203-9|CAB60420.3|  675|Caenorhabditis elegans Hypothetical ...    30   1.6  
Z81528-1|CAB04282.1|  345|Caenorhabditis elegans Hypothetical pr...    30   2.1  
U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AF098985-4|AAC67422.2|  373|Caenorhabditis elegans Synaptotagmin...    29   3.6  
Z78062-4|CAB01498.2|  341|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase ...    29   4.7  
U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase ...    29   4.7  

>AF039038-8|AAM81097.1|  874|Caenorhabditis elegans Hypothetical
           protein K06A5.8a protein.
          Length = 874

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 307 PTPPSTGHICRR*LLA-LRSNQDFRR*DPSNSRRHCGFDPPGSLCG 441
           PTP    H+C    L  L  ++DF+  +PS++R  C F+    LCG
Sbjct: 143 PTPEDYRHLCALLTLPKLSDHEDFKNWNPSSARVEC-FNKVNQLCG 187


>AF039038-7|AAM81098.1|  942|Caenorhabditis elegans Hypothetical
           protein K06A5.8b protein.
          Length = 942

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 307 PTPPSTGHICRR*LLA-LRSNQDFRR*DPSNSRRHCGFDPPGSLCG 441
           PTP    H+C    L  L  ++DF+  +PS++R  C F+    LCG
Sbjct: 143 PTPEDYRHLCALLTLPKLSDHEDFKNWNPSSARVEC-FNKVNQLCG 187


>AL117203-9|CAB60420.3|  675|Caenorhabditis elegans Hypothetical
           protein Y48C3A.12 protein.
          Length = 675

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +2

Query: 575 STIFPSITSQPRSSLDAATSRACTTPVRRPSPTVA 679
           ST   + TS P +S+ AAT+   TT   +PSPT +
Sbjct: 616 STSTTAYTSTPTASIPAATAITTTTAPPKPSPTTS 650


>Z81528-1|CAB04282.1|  345|Caenorhabditis elegans Hypothetical
           protein F35E2.1 protein.
          Length = 345

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = +2

Query: 344 DFLRSEATKTFEDETRRIRADTAALIHRA--RSVVPRAKSLAPLDTIYSYSYGEPIPTVS 517
           +F+     K FE+E + I++    L      +SV+P   SL  L   + + +G P+P+  
Sbjct: 215 NFVILRFVKHFENENKNIQSKIIQLTQSLLIQSVIPVIVSLPLLLLSFEFYFGIPMPSSF 274

Query: 518 AMTLTLLSFWCPY 556
             T   L+F  P+
Sbjct: 275 GSTWYALTFLGPF 287


>U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical
           protein ZK154.5 protein.
          Length = 1105

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 19/65 (29%), Positives = 31/65 (47%)
 Frame = +2

Query: 551 PYAASRIASTIFPSITSQPRSSLDAATSRACTTPVRRPSPTVATLQGAQHQG*REPALVL 730
           P  +SR    IFP +TS PR +       A   PV+   P++A    +     R+P + L
Sbjct: 280 PSTSSRPPIPIFPVVTSAPRPNQRPLPHMAPKLPVKVFIPSLARKINSSAVPLRDPKIEL 339

Query: 731 REEQA 745
           ++ +A
Sbjct: 340 KDPKA 344


>AF098985-4|AAC67422.2|  373|Caenorhabditis elegans Synaptotagmin
           protein 6 protein.
          Length = 373

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +1

Query: 472 HHLLIFIRRTDPDRFSNDAYIAKLLVPLRSV 564
           H + + ++  D DRFS+D  I ++L+PL+ V
Sbjct: 181 HDMTLVLQVMDYDRFSSDDPIGEILLPLKHV 211


>Z78062-4|CAB01498.2|  341|Caenorhabditis elegans Hypothetical
           protein F16D3.6 protein.
          Length = 341

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = +2

Query: 344 DFLRSEATKTFED-ETRRIRADTAALIHRARSVVPRAKSLAPLDTIYSYSYGEPIPTVSA 520
           +F+     K FE+ +++RI+   + LI   +SV+P   SL  L   + + +G P+P+   
Sbjct: 215 NFVILRFVKHFENIQSKRIQLTQSLLI---QSVIPVIVSLPLLLLSFEFYFGIPMPSSFG 271

Query: 521 MTLTLLSFWCPY 556
            T   L+F  P+
Sbjct: 272 STWYALTFLGPF 283


>U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase
           protein 25, isoformb protein.
          Length = 1130

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +2

Query: 581 IFPSITSQPRSSLDAATSRA--CTTPVRRPSPTVATL 685
           I  S   QP     A TS+A   T P+R PSP VAT+
Sbjct: 879 ILSSEVLQPTRLPSATTSQAKPVTQPIRHPSPPVATV 915


>U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase
            protein 25, isoforma protein.
          Length = 1237

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +2

Query: 581  IFPSITSQPRSSLDAATSRA--CTTPVRRPSPTVATL 685
            I  S   QP     A TS+A   T P+R PSP VAT+
Sbjct: 986  ILSSEVLQPTRLPSATTSQAKPVTQPIRHPSPPVATV 1022


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,565,914
Number of Sequences: 27780
Number of extensions: 340231
Number of successful extensions: 1035
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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