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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301B11f
         (426 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z36752-6|CAA85327.1|  456|Caenorhabditis elegans Hypothetical pr...   117   4e-27
U28944-5|AAK68191.1|  408|Caenorhabditis elegans Hypothetical pr...    55   2e-08
AL032631-3|CAE54916.1|  583|Caenorhabditis elegans Hypothetical ...    52   2e-07
AL032631-2|CAA21572.1|  646|Caenorhabditis elegans Hypothetical ...    52   2e-07
U24123-1|AAA65224.1|  646|Caenorhabditis elegans polyadenylate-b...    50   5e-07
AL110485-8|CAB60356.1|  434|Caenorhabditis elegans Hypothetical ...    50   9e-07
AL137227-1|CAB70238.2|  611|Caenorhabditis elegans Hypothetical ...    48   4e-06
Z50874-3|CAA90773.1|  409|Caenorhabditis elegans Hypothetical pr...    46   1e-05
Z50874-2|CAA90772.1|  357|Caenorhabditis elegans Hypothetical pr...    46   1e-05
Z36238-3|CAA85276.1|  404|Caenorhabditis elegans Hypothetical pr...    46   1e-05
DQ485531-1|ABF22491.1|  404|Caenorhabditis elegans RNA-binding p...    46   1e-05
AC024791-23|AAM81102.1|  346|Caenorhabditis elegans Rnp (rrm rna...    45   2e-05
AC024791-22|AAF60676.1|  339|Caenorhabditis elegans Rnp (rrm rna...    45   2e-05
AC024791-21|AAF60666.1|  749|Caenorhabditis elegans Rnp (rrm rna...    45   2e-05
Z50110-2|CAA90446.1|  566|Caenorhabditis elegans Hypothetical pr...    44   5e-05
Z50110-1|CAA90444.1|  692|Caenorhabditis elegans Hypothetical pr...    44   5e-05
U28944-7|AAN63457.1|  295|Caenorhabditis elegans Hypothetical pr...    44   6e-05
U28944-6|AAN63456.1|  305|Caenorhabditis elegans Hypothetical pr...    44   6e-05
U28944-4|AAK68192.1|  376|Caenorhabditis elegans Hypothetical pr...    44   6e-05
U41531-7|AAA83161.2|  415|Caenorhabditis elegans Feminizing gene...    43   1e-04
U14946-1|AAA67723.1|  415|Caenorhabditis elegans ribonucleoprote...    43   1e-04
AF098993-1|AAC67471.2|  367|Caenorhabditis elegans Zinc finger t...    42   1e-04
AF040642-5|AAN73870.2|  138|Caenorhabditis elegans Hypothetical ...    42   2e-04
Z81473-3|CAB03896.4|  514|Caenorhabditis elegans Hypothetical pr...    41   4e-04
AY342388-1|AAQ19851.1|  514|Caenorhabditis elegans putative RNA-...    41   4e-04
Z78536-3|CAB01717.2|  360|Caenorhabditis elegans Hypothetical pr...    40   7e-04
U80455-1|AAB37881.1|  584|Caenorhabditis elegans Elav-type rna b...    40   7e-04
U53931-1|AAA98566.1|  584|Caenorhabditis elegans elav-type ribon...    40   7e-04
EF523770-1|ABS18836.1|  513|Caenorhabditis elegans ELAV-type RNA...    40   7e-04
EF523769-1|ABS18835.1|  327|Caenorhabditis elegans ELAV-type RNA...    40   7e-04
EF523768-1|ABS18834.1|  378|Caenorhabditis elegans ELAV-type RNA...    40   7e-04
EF523767-1|ABS18833.1|  193|Caenorhabditis elegans ELAV-type RNA...    40   7e-04
EF523766-1|ABS18832.1|  584|Caenorhabditis elegans ELAV-type RNA...    40   7e-04
Z83127-4|CAB05631.1|  872|Caenorhabditis elegans Hypothetical pr...    40   0.001
U79157-1|AAC26982.1|  496|Caenorhabditis elegans splicing factor...    40   0.001
AC024875-3|AAK29989.1|  496|Caenorhabditis elegans U2af splicing...    40   0.001
AC024875-2|AAM44400.1|  471|Caenorhabditis elegans U2af splicing...    40   0.001
AC024875-1|AAL00879.1|  474|Caenorhabditis elegans U2af splicing...    40   0.001
Z36238-4|CAD82915.1|  286|Caenorhabditis elegans Hypothetical pr...    39   0.002
Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical pr...    38   0.002
U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA bi...    38   0.002
Z83230-6|CAB05746.1|  336|Caenorhabditis elegans Hypothetical pr...    38   0.003
AC084197-11|AAM44397.1|  305|Caenorhabditis elegans Homologous t...    36   0.012
AC084197-10|AAY43984.1|  308|Caenorhabditis elegans Homologous t...    36   0.012
Z81108-4|CAB03237.1|   85|Caenorhabditis elegans Hypothetical pr...    35   0.021
Z32683-11|CAA83626.1|  142|Caenorhabditis elegans Hypothetical p...    35   0.028
U41007-10|AAL32214.1|  118|Caenorhabditis elegans Sr protein (sp...    34   0.037
U41007-9|AAL32213.1|  153|Caenorhabditis elegans Sr protein (spl...    34   0.037
U41007-8|AAA82270.1|  179|Caenorhabditis elegans Sr protein (spl...    34   0.037
Z81106-3|CAB03222.1|   84|Caenorhabditis elegans Hypothetical pr...    34   0.049
AC024826-10|AAM97977.1|  435|Caenorhabditis elegans Hypothetical...    34   0.049
AC024826-8|AAF60795.2|  580|Caenorhabditis elegans Hypothetical ...    34   0.049
U23484-17|AAK68296.1|  367|Caenorhabditis elegans Tudor domain p...    33   0.065
AF303251-1|AAG50209.1|  367|Caenorhabditis elegans 2F713 protein.      33   0.065
Z81108-1|CAB03236.1|   83|Caenorhabditis elegans Hypothetical pr...    33   0.086
Z50044-2|CAA90354.1|  256|Caenorhabditis elegans Hypothetical pr...    33   0.086
U80455-2|AAB37882.2|  420|Caenorhabditis elegans Elav-type rna b...    32   0.15 
U55363-5|AAA97963.1|  351|Caenorhabditis elegans Spindle orienta...    31   0.26 
AB052819-1|BAC65239.1|  351|Caenorhabditis elegans PIP-1 protein.      31   0.26 
AL117204-22|CAB55151.1|  331|Caenorhabditis elegans Hypothetical...    31   0.35 
AL132904-14|CAC35847.2|  258|Caenorhabditis elegans Hypothetical...    30   0.60 
AF242767-1|AAG36874.1|  258|Caenorhabditis elegans SF2 protein.        30   0.60 
AC024818-2|AAF60781.1|  302|Caenorhabditis elegans Temporarily a...    30   0.60 
U00052-10|AAK21429.2|  289|Caenorhabditis elegans Rnp (rrm rna b...    29   1.1  
Z82286-3|CAB05309.1|  781|Caenorhabditis elegans Hypothetical pr...    29   1.4  
Z66521-8|CAA91394.1|  281|Caenorhabditis elegans Hypothetical pr...    29   1.4  
AL032626-17|CAA21536.1|  282|Caenorhabditis elegans Hypothetical...    29   1.4  
AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical ...    29   1.4  
U80455-3|AAO38606.1|  145|Caenorhabditis elegans Elav-type rna b...    29   1.8  
U23484-7|ABB88232.1|  738|Caenorhabditis elegans Hypothetical pr...    29   1.8  
Z97628-2|CAB10726.2|  427|Caenorhabditis elegans Hypothetical pr...    28   3.2  
Z81080-5|CAB03088.2|  427|Caenorhabditis elegans Hypothetical pr...    28   3.2  
Z81080-2|CAD56584.1|  358|Caenorhabditis elegans Hypothetical pr...    28   3.2  
Z70203-1|CAA94104.1|  456|Caenorhabditis elegans Hypothetical pr...    28   3.2  
U23172-15|AAN63408.1|  374|Caenorhabditis elegans Hypothetical p...    28   3.2  
U23172-12|ABH03526.1|  562|Caenorhabditis elegans Hypothetical p...    28   3.2  
U21320-5|AAA62536.2|  332|Caenorhabditis elegans Rnp (rrm rna bi...    28   3.2  
Z92826-4|CAB07322.1|  309|Caenorhabditis elegans Hypothetical pr...    27   4.3  
U23450-2|AAK31468.1|  302|Caenorhabditis elegans Hypothetical pr...    27   4.3  
Z81038-2|CAB02757.1|  454|Caenorhabditis elegans Hypothetical pr...    27   5.6  
U23172-14|AAL02495.1|  165|Caenorhabditis elegans Hypothetical p...    27   5.6  
AL032631-4|CAE54917.1|  586|Caenorhabditis elegans Hypothetical ...    27   5.6  
AC006605-3|AAK85442.1|  933|Caenorhabditis elegans Hypothetical ...    27   5.6  
Z70312-2|CAA94386.2|  396|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z49911-12|CAD30448.1|  137|Caenorhabditis elegans Hypothetical p...    27   7.4  
Z49911-11|CAA90135.2|  452|Caenorhabditis elegans Hypothetical p...    27   7.4  
Z36948-7|CAD30436.1|  137|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z36948-6|CAA85414.2|  452|Caenorhabditis elegans Hypothetical pr...    27   7.4  
U28738-11|AAK68399.3|  166|Caenorhabditis elegans Sr protein (sp...    27   7.4  
U28738-10|AAK72066.3|  208|Caenorhabditis elegans Sr protein (sp...    27   7.4  
U28738-9|AAA68314.3|  208|Caenorhabditis elegans Sr protein (spl...    27   7.4  
U39997-3|AAK68389.1|  498|Caenorhabditis elegans Human daz (dele...    26   9.8  
AL161712-13|CAC70137.1|  830|Caenorhabditis elegans Hypothetical...    26   9.8  
AB025253-1|BAA88577.1|  499|Caenorhabditis elegans DAZ-1 protein.      26   9.8  

>Z36752-6|CAA85327.1|  456|Caenorhabditis elegans Hypothetical
           protein F35H8.5 protein.
          Length = 456

 Score =  117 bits (281), Expect = 4e-27
 Identities = 63/150 (42%), Positives = 95/150 (63%), Gaps = 14/150 (9%)
 Frame = +1

Query: 10  ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVK 171
           ES T LI+NY+P+ MTQ+ + SLF+++G++ESCKL+ ++      GYGFV Y R +DA++
Sbjct: 39  ESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALR 98

Query: 172 ARKAFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFG 351
           A  +FNGL +QNKT+KVS+A      +P        NLY+  +P  +TL +L  +F  FG
Sbjct: 99  AVSSFNGLRLQNKTIKVSYA------RPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFG 152

Query: 352 RIINSRI--------AAGIAFVLYEHQYEA 417
           +II SRI        + G+ FV ++ + EA
Sbjct: 153 QIITSRILSDNVTGLSKGVGFVRFDKKDEA 182



 Score = 33.9 bits (74), Expect = 0.049
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
 Frame = +1

Query: 19  TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN------RGYGFVEYTRPDDAVKARK 180
           + L V+ IP+ MT   + S+F   G++ + +++++      +G GFV + + D+A  A K
Sbjct: 128 SNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAIK 187

Query: 181 AFNG 192
             NG
Sbjct: 188 TLNG 191



 Score = 31.9 bits (69), Expect = 0.20
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
 Frame = +1

Query: 64  MMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKV 222
           +++ LFS  G + + K++ +     +GY FV  +   +A  A  + NG  +  KTL+V
Sbjct: 389 LLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQV 446



 Score = 28.7 bits (61), Expect = 1.8
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
 Frame = +1

Query: 256 PTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRI-------AAGIAFVLYEHQYE 414
           P    A + L++ NL ++     L  LF+QFG I+N +I         G AFV   +  E
Sbjct: 367 PPSDTAGYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTE 426

Query: 415 AXRA 426
           A  A
Sbjct: 427 AYNA 430


>U28944-5|AAK68191.1|  408|Caenorhabditis elegans Hypothetical
           protein C18A3.5a protein.
          Length = 408

 Score = 54.8 bits (126), Expect = 2e-08
 Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
 Frame = +1

Query: 10  ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI---ANRGYGFVEYTRPDDAVKARK 180
           + P  L V  +   +T+D + +LF+ +G +   K+I   +N  Y FVE++    A +A +
Sbjct: 43  DEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQALQ 102

Query: 181 AFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRII 360
             N  L+ ++ +KV+ A+   + +        +++++ +L +E+  Q L   F  FG + 
Sbjct: 103 TMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVS 162

Query: 361 NSRI--------AAGIAFVLYEHQYEAXRA 426
           ++++        + G  FV Y  + EA RA
Sbjct: 163 DAKVIRDTNTTKSKGYGFVSYPKREEAERA 192



 Score = 43.6 bits (98), Expect = 6e-05
 Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 16/118 (13%)
 Frame = +1

Query: 121 NRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHALLNP--ELKPPTKPEADW----- 279
           ++GYGFV Y + ++A +A +  NG  +  +T++ + A   P  + KP    E  +     
Sbjct: 175 SKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYN 234

Query: 280 -------NLYICNLPNELTLQDLHGLFAQFGRIINSRI--AAGIAFVLYEHQYEAXRA 426
                  ++Y+ N+ + LT  ++   FA FGRI   RI    G AFV ++++  A +A
Sbjct: 235 QTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 291



 Score = 31.1 bits (67), Expect = 0.35
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +1

Query: 52  MTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKA 174
           +T+D +   F++ G++   ++   +GY FV++   D A KA
Sbjct: 251 LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 291


>AL032631-3|CAE54916.1|  583|Caenorhabditis elegans Hypothetical
           protein Y106G6H.2b protein.
          Length = 583

 Score = 51.6 bits (118), Expect = 2e-07
 Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
 Frame = +1

Query: 25  LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKAFN 189
           + +  + +V+    ++  FS  G + SCK+  +     +GYGFV +   + A  A +  N
Sbjct: 59  IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 118

Query: 190 GLLMQNKTLKVS----HALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRI 357
           G+L+  K + V      A  N EL    K     N+Y+ N  +    + L  LFA+FG I
Sbjct: 119 GMLLAGKKVFVGKFQPRAQRNRELGETAKQFT--NVYVKNFGDHYNKETLEKLFAKFGNI 176

Query: 358 INSRI------AAGIAFVLYEHQYEAXRA 426
            +  +      + G  FV + +  EA  A
Sbjct: 177 TSCEVMTVEGKSKGFGFVAFANPEEAETA 205


>AL032631-2|CAA21572.1|  646|Caenorhabditis elegans Hypothetical
           protein Y106G6H.2a protein.
          Length = 646

 Score = 51.6 bits (118), Expect = 2e-07
 Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
 Frame = +1

Query: 25  LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKAFN 189
           + +  + +V+    ++  FS  G + SCK+  +     +GYGFV +   + A  A +  N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 181

Query: 190 GLLMQNKTLKVS----HALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRI 357
           G+L+  K + V      A  N EL    K     N+Y+ N  +    + L  LFA+FG I
Sbjct: 182 GMLLAGKKVFVGKFQPRAQRNRELGETAKQFT--NVYVKNFGDHYNKETLEKLFAKFGNI 239

Query: 358 INSRI------AAGIAFVLYEHQYEAXRA 426
            +  +      + G  FV + +  EA  A
Sbjct: 240 TSCEVMTVEGKSKGFGFVAFANPEEAETA 268


>U24123-1|AAA65224.1|  646|Caenorhabditis elegans
           polyadenylate-binding protein protein.
          Length = 646

 Score = 50.4 bits (115), Expect = 5e-07
 Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
 Frame = +1

Query: 25  LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKAFN 189
           + +  + +V+    ++  FS  G + SCK+  +     +GYGFV +   + A  A +  N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 181

Query: 190 GLLMQNKTLKVS----HALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRI 357
           G+L+  K + V      A  N EL    K     N+Y+ N  +    + L  +FA+FG I
Sbjct: 182 GMLLAGKKVFVGKFQPRAQRNRELGETAKQFT--NVYVKNFGDHYNKETLEKVFAKFGNI 239

Query: 358 INSRI------AAGIAFVLYEHQYEAXRA 426
            +  +      + G  FV + +  EA  A
Sbjct: 240 TSCEVMTVEGKSKGFGFVAFANPEEAETA 268


>AL110485-8|CAB60356.1|  434|Caenorhabditis elegans Hypothetical
           protein Y46G5A.13 protein.
          Length = 434

 Score = 49.6 bits (113), Expect = 9e-07
 Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
 Frame = +1

Query: 10  ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI---ANRGYGFVEYTRPDDAVKARK 180
           E P  L V  +   +T + + +LF+ +G +   K+I    N  Y FVE++  + A  A +
Sbjct: 37  EDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDPYAFVEFSDHNQATLALQ 96

Query: 181 AFNGLLMQNKTLKVSHALLNPEL-KPPTKPEAD--WNLYICNLPNELTLQDLHGLFAQFG 351
           + NG  +  K + V+ A    E  +  +KPE    +++++ +L +E+    L   F +FG
Sbjct: 97  SHNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFG 156

Query: 352 RIINSRI--------AAGIAFVLYEHQYEAXRA 426
            +  ++I          G  FV Y  + +A RA
Sbjct: 157 EVSEAKIIRDNNTNKGKGYGFVSYPRREDAERA 189



 Score = 36.7 bits (81), Expect = 0.007
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
 Frame = +1

Query: 79  FSTMGKLESCKLIAN------RGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHALLN 240
           F   G++   K+I +      +GYGFV Y R +DA +A    NG  +  +T++ + A   
Sbjct: 152 FVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRK 211

Query: 241 PE 246
           P+
Sbjct: 212 PD 213


>AL137227-1|CAB70238.2|  611|Caenorhabditis elegans Hypothetical
           protein F58D5.1 protein.
          Length = 611

 Score = 47.6 bits (108), Expect = 4e-06
 Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
 Frame = +1

Query: 1   GPEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDD 162
           GP     ++ V +IP  + +D +  LF   GK+   +L+      A+RGY FV Y   +D
Sbjct: 194 GPAGQGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKED 253

Query: 163 AVKARKAFNG-LLMQNKTLKVSHALLNPEL 249
           A  A K ++G  +   K LKV+ ++ N  L
Sbjct: 254 AAAAAKTYDGHEISTGKPLKVNVSIANTRL 283



 Score = 38.3 bits (85), Expect = 0.002
 Identities = 21/81 (25%), Positives = 39/81 (48%)
 Frame = +1

Query: 25  LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKARKAFNGLLMQ 204
           L +  I E +T++ +  LF     L+  K +  + Y F+ +   DD +KA + +NG  ++
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKV--KDYAFIHFNERDDCLKAMEEWNGKELE 436

Query: 205 NKTLKVSHALLNPELKPPTKP 267
              ++ S  L  P  +   KP
Sbjct: 437 GTVVEAS--LAKPPQEKKKKP 455



 Score = 27.9 bits (59), Expect = 3.2
 Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
 Frame = +1

Query: 115 IANRGYGFVEYTRPDDA--VKARKAFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLY 288
           I NRG+ FV++     A  +K + A + +   N  + V  A    E    T  +    LY
Sbjct: 322 IKNRGFCFVDFIDHKTASDIKRKIAQHKIRPFNADVYVDWAEHQEEPDEDTMSKVKV-LY 380

Query: 289 ICNLPNELTLQDLHGLFAQFGRIINSRIAAGIAFVLYEHQYEAXRA 426
           I N+   +T + L+ LF ++  +   +     AF+ +  + +  +A
Sbjct: 381 IRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKA 426


>Z50874-3|CAA90773.1|  409|Caenorhabditis elegans Hypothetical
           protein R10E4.2b protein.
          Length = 409

 Score = 45.6 bits (103), Expect = 1e-05
 Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
 Frame = +1

Query: 13  SPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKA 174
           S T L +  +      D++  + S  G + S K I ++      GYGFV++  P  A  A
Sbjct: 105 SSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAA 164

Query: 175 RKAFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGR 354
               N      + ++   A L  + + PT      NLYI NLP + T Q L     +FG 
Sbjct: 165 VDGLN-----TEGVQAQMAKLQQQEQDPT------NLYIANLPLDFTEQMLETELNKFGM 213

Query: 355 IINSRI 372
           +I++RI
Sbjct: 214 VISTRI 219


>Z50874-2|CAA90772.1|  357|Caenorhabditis elegans Hypothetical
           protein R10E4.2a protein.
          Length = 357

 Score = 45.6 bits (103), Expect = 1e-05
 Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
 Frame = +1

Query: 13  SPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKA 174
           S T L +  +      D++  + S  G + S K I ++      GYGFV++  P  A  A
Sbjct: 79  SSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAA 138

Query: 175 RKAFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGR 354
               N      + ++   A L  + + PT      NLYI NLP + T Q L     +FG 
Sbjct: 139 VDGLN-----TEGVQAQMAKLQQQEQDPT------NLYIANLPLDFTEQMLETELNKFGM 187

Query: 355 IINSRI 372
           +I++RI
Sbjct: 188 VISTRI 193


>Z36238-3|CAA85276.1|  404|Caenorhabditis elegans Hypothetical
           protein R74.5a protein.
          Length = 404

 Score = 45.6 bits (103), Expect = 1e-05
 Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
 Frame = +1

Query: 10  ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN----RGYGFVEYTRPDDAVKAR 177
           + P +L V+ IP    +  + ++F  +G +   ++I N    +G+GFV    PDDA +AR
Sbjct: 97  DGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRAR 156

Query: 178 KAFNGLLMQNKTLKVSHA 231
             FNG  ++ + ++V+ A
Sbjct: 157 AEFNGTTIEGRRVEVNLA 174


>DQ485531-1|ABF22491.1|  404|Caenorhabditis elegans RNA-binding
           protein ASD-1 protein.
          Length = 404

 Score = 45.6 bits (103), Expect = 1e-05
 Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
 Frame = +1

Query: 10  ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN----RGYGFVEYTRPDDAVKAR 177
           + P +L V+ IP    +  + ++F  +G +   ++I N    +G+GFV    PDDA +AR
Sbjct: 97  DGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRAR 156

Query: 178 KAFNGLLMQNKTLKVSHA 231
             FNG  ++ + ++V+ A
Sbjct: 157 AEFNGTTIEGRRVEVNLA 174


>AC024791-23|AAM81102.1|  346|Caenorhabditis elegans Rnp (rrm rna
           binding domain) containingprotein 6, isoform c protein.
          Length = 346

 Score = 45.2 bits (102), Expect = 2e-05
 Identities = 32/138 (23%), Positives = 67/138 (48%), Gaps = 19/138 (13%)
 Frame = +1

Query: 19  TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDAVKARK 180
           +++ V  I   + +DM+   F   G ++S  +        ++ + FVEY  P+ A+ A++
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161

Query: 181 AFNGLLMQNKTLKVSHALLN----PELKPPTKPEAD---------WNLYICNLPNELTLQ 321
           + NG ++  + LKV+  +      P+  P  +P  D         + +Y+ ++  +L+  
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSET 221

Query: 322 DLHGLFAQFGRIINSRIA 375
           DL  +F  FG I+  ++A
Sbjct: 222 DLKSVFEAFGEIVKCQLA 239


>AC024791-22|AAF60676.1|  339|Caenorhabditis elegans Rnp (rrm rna
           binding domain) containingprotein 6, isoform a protein.
          Length = 339

 Score = 45.2 bits (102), Expect = 2e-05
 Identities = 32/138 (23%), Positives = 67/138 (48%), Gaps = 19/138 (13%)
 Frame = +1

Query: 19  TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDAVKARK 180
           +++ V  I   + +DM+   F   G ++S  +        ++ + FVEY  P+ A+ A++
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161

Query: 181 AFNGLLMQNKTLKVSHALLN----PELKPPTKPEAD---------WNLYICNLPNELTLQ 321
           + NG ++  + LKV+  +      P+  P  +P  D         + +Y+ ++  +L+  
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSET 221

Query: 322 DLHGLFAQFGRIINSRIA 375
           DL  +F  FG I+  ++A
Sbjct: 222 DLKSVFEAFGEIVKCQLA 239


>AC024791-21|AAF60666.1|  749|Caenorhabditis elegans Rnp (rrm rna
           binding domain) containingprotein 6, isoform b protein.
          Length = 749

 Score = 45.2 bits (102), Expect = 2e-05
 Identities = 32/138 (23%), Positives = 67/138 (48%), Gaps = 19/138 (13%)
 Frame = +1

Query: 19  TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDAVKARK 180
           +++ V  I   + +DM+   F   G ++S  +        ++ + FVEY  P+ A+ A++
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161

Query: 181 AFNGLLMQNKTLKVSHALLN----PELKPPTKPEAD---------WNLYICNLPNELTLQ 321
           + NG ++  + LKV+  +      P+  P  +P  D         + +Y+ ++  +L+  
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSET 221

Query: 322 DLHGLFAQFGRIINSRIA 375
           DL  +F  FG I+  ++A
Sbjct: 222 DLKSVFEAFGEIVKCQLA 239


>Z50110-2|CAA90446.1|  566|Caenorhabditis elegans Hypothetical
           protein F18H3.3b protein.
          Length = 566

 Score = 44.0 bits (99), Expect = 5e-05
 Identities = 34/148 (22%), Positives = 66/148 (44%), Gaps = 14/148 (9%)
 Frame = +1

Query: 25  LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKAFN 189
           + +  +  V+    ++  FS  G + SCK+  +     +GYGFV +     A  A +  N
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVN 206

Query: 190 GLLMQNKTLKVSHALLNPE-LKPPTKPEADW-NLYICNLPNELTLQDLHGLFAQFGRIIN 363
           G+L+ +K + V       + +K   +    + N+++ N    L  + L  +F++FG I +
Sbjct: 207 GMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITS 266

Query: 364 SRIAA-------GIAFVLYEHQYEAXRA 426
           + +         G  FV +  Q  A +A
Sbjct: 267 AVVMTDAQGKPKGFGFVAFADQDAAGQA 294



 Score = 38.3 bits (85), Expect = 0.002
 Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 26/162 (16%)
 Frame = +1

Query: 19  TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKA 183
           T + V    E + Q+ + ++FS  G++ S  ++ +     +G+GFV +   D A +A + 
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297

Query: 184 FNGLLMQNKTLKVS------HALLNPELK---PPTKPEA-----DWNLYICNLPNELTLQ 321
            N  +++    K+S       +  + ELK      K E        NLY+ N+  +L   
Sbjct: 298 LNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDD 357

Query: 322 DLHGLFAQFGRIINSRI-------AAGIAFVLYEHQYEAXRA 426
            L   F+ FG I ++++       + G  FV +E   EA  A
Sbjct: 358 GLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAA 399


>Z50110-1|CAA90444.1|  692|Caenorhabditis elegans Hypothetical
           protein F18H3.3a protein.
          Length = 692

 Score = 44.0 bits (99), Expect = 5e-05
 Identities = 34/148 (22%), Positives = 66/148 (44%), Gaps = 14/148 (9%)
 Frame = +1

Query: 25  LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKAFN 189
           + +  +  V+    ++  FS  G + SCK+  +     +GYGFV +     A  A +  N
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVN 206

Query: 190 GLLMQNKTLKVSHALLNPE-LKPPTKPEADW-NLYICNLPNELTLQDLHGLFAQFGRIIN 363
           G+L+ +K + V       + +K   +    + N+++ N    L  + L  +F++FG I +
Sbjct: 207 GMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITS 266

Query: 364 SRIAA-------GIAFVLYEHQYEAXRA 426
           + +         G  FV +  Q  A +A
Sbjct: 267 AVVMTDAQGKPKGFGFVAFADQDAAGQA 294



 Score = 38.3 bits (85), Expect = 0.002
 Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 26/162 (16%)
 Frame = +1

Query: 19  TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKA 183
           T + V    E + Q+ + ++FS  G++ S  ++ +     +G+GFV +   D A +A + 
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297

Query: 184 FNGLLMQNKTLKVS------HALLNPELK---PPTKPEA-----DWNLYICNLPNELTLQ 321
            N  +++    K+S       +  + ELK      K E        NLY+ N+  +L   
Sbjct: 298 LNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDD 357

Query: 322 DLHGLFAQFGRIINSRI-------AAGIAFVLYEHQYEAXRA 426
            L   F+ FG I ++++       + G  FV +E   EA  A
Sbjct: 358 GLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAA 399


>U28944-7|AAN63457.1|  295|Caenorhabditis elegans Hypothetical
           protein C18A3.5f protein.
          Length = 295

 Score = 43.6 bits (98), Expect = 6e-05
 Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 16/118 (13%)
 Frame = +1

Query: 121 NRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHALLNP--ELKPPTKPEADW----- 279
           ++GYGFV Y + ++A +A +  NG  +  +T++ + A   P  + KP    E  +     
Sbjct: 62  SKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYN 121

Query: 280 -------NLYICNLPNELTLQDLHGLFAQFGRIINSRI--AAGIAFVLYEHQYEAXRA 426
                  ++Y+ N+ + LT  ++   FA FGRI   RI    G AFV ++++  A +A
Sbjct: 122 QTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 178



 Score = 31.1 bits (67), Expect = 0.35
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +1

Query: 52  MTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKA 174
           +T+D +   F++ G++   ++   +GY FV++   D A KA
Sbjct: 138 LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 178


>U28944-6|AAN63456.1|  305|Caenorhabditis elegans Hypothetical
           protein C18A3.5e protein.
          Length = 305

 Score = 43.6 bits (98), Expect = 6e-05
 Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 16/118 (13%)
 Frame = +1

Query: 121 NRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHALLNP--ELKPPTKPEADW----- 279
           ++GYGFV Y + ++A +A +  NG  +  +T++ + A   P  + KP    E  +     
Sbjct: 72  SKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYN 131

Query: 280 -------NLYICNLPNELTLQDLHGLFAQFGRIINSRI--AAGIAFVLYEHQYEAXRA 426
                  ++Y+ N+ + LT  ++   FA FGRI   RI    G AFV ++++  A +A
Sbjct: 132 QTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 188



 Score = 31.1 bits (67), Expect = 0.35
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +1

Query: 52  MTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKA 174
           +T+D +   F++ G++   ++   +GY FV++   D A KA
Sbjct: 148 LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 188


>U28944-4|AAK68192.1|  376|Caenorhabditis elegans Hypothetical
           protein C18A3.5b protein.
          Length = 376

 Score = 43.6 bits (98), Expect = 6e-05
 Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 16/118 (13%)
 Frame = +1

Query: 121 NRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHALLNP--ELKPPTKPEADW----- 279
           ++GYGFV Y + ++A +A +  NG  +  +T++ + A   P  + KP    E  +     
Sbjct: 143 SKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYN 202

Query: 280 -------NLYICNLPNELTLQDLHGLFAQFGRIINSRI--AAGIAFVLYEHQYEAXRA 426
                  ++Y+ N+ + LT  ++   FA FGRI   RI    G AFV ++++  A +A
Sbjct: 203 QTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 259



 Score = 31.1 bits (67), Expect = 0.35
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +1

Query: 52  MTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKA 174
           +T+D +   F++ G++   ++   +GY FV++   D A KA
Sbjct: 219 LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 259


>U41531-7|AAA83161.2|  415|Caenorhabditis elegans Feminizing gene on
           x protein 1 protein.
          Length = 415

 Score = 42.7 bits (96), Expect = 1e-04
 Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
 Frame = +1

Query: 1   GPEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN----RGYGFVEYTRPDDAV 168
           GP+  P +L V+ IP       + ++F   G +   ++I N    +G+GFV   RP DA 
Sbjct: 148 GPD-GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAE 206

Query: 169 KARKAFNGLLMQNKTLKVSHA 231
           +AR+  +G +++ + ++V+ A
Sbjct: 207 RARQELHGSMIEGRKIEVNCA 227



 Score = 33.5 bits (73), Expect = 0.065
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
 Frame = +1

Query: 223 SHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFG------RIINSRIAAGI 384
           S A+  P+    + P+    L++ N+P      DL  +F +FG       I N R + G 
Sbjct: 135 SAAVTQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGF 194

Query: 385 AFVLYEHQYEAXRA 426
            FV  E   +A RA
Sbjct: 195 GFVTMERPQDAERA 208


>U14946-1|AAA67723.1|  415|Caenorhabditis elegans ribonucleoprotein
           protein.
          Length = 415

 Score = 42.7 bits (96), Expect = 1e-04
 Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
 Frame = +1

Query: 1   GPEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN----RGYGFVEYTRPDDAV 168
           GP+  P +L V+ IP       + ++F   G +   ++I N    +G+GFV   RP DA 
Sbjct: 148 GPD-GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAE 206

Query: 169 KARKAFNGLLMQNKTLKVSHA 231
           +AR+  +G +++ + ++V+ A
Sbjct: 207 RARQELHGSMIEGRKIEVNCA 227



 Score = 33.5 bits (73), Expect = 0.065
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
 Frame = +1

Query: 223 SHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFG------RIINSRIAAGI 384
           S A+  P+    + P+    L++ N+P      DL  +F +FG       I N R + G 
Sbjct: 135 SAAVTQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGF 194

Query: 385 AFVLYEHQYEAXRA 426
            FV  E   +A RA
Sbjct: 195 GFVTMERPQDAERA 208


>AF098993-1|AAC67471.2|  367|Caenorhabditis elegans Zinc finger
           transcription factorfamily protein 4 protein.
          Length = 367

 Score = 42.3 bits (95), Expect = 1e-04
 Identities = 24/81 (29%), Positives = 42/81 (51%)
 Frame = +1

Query: 28  IVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKARKAFNGLLMQN 207
           I N    ++T+D +  LF   GK+ +    A +G+GFV++     A ++ ++ NG+  + 
Sbjct: 87  IGNIARAIITRDDIIELFRPFGKIIAVNYFAQQGFGFVQFNEAGSADESCRSLNGMSWKA 146

Query: 208 KTLKVSHALLNPELKPPTKPE 270
             L V  A+L   L+ PT  E
Sbjct: 147 CCLDVHLAMLG-SLRKPTGNE 166


>AF040642-5|AAN73870.2|  138|Caenorhabditis elegans Hypothetical
           protein C50D2.5 protein.
          Length = 138

 Score = 41.9 bits (94), Expect = 2e-04
 Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
 Frame = +1

Query: 265 PEADWNLYICNLPNELTLQDLHGLFAQFG-----RIINSRIAAGIAFVLYEHQYEAXRA 426
           PE +  LYI NLP ++T ++++ +F +FG     R+ N+    G AFV+YE  ++A  A
Sbjct: 15  PEVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETRGTAFVVYEDIFDAKTA 73


>Z81473-3|CAB03896.4|  514|Caenorhabditis elegans Hypothetical
           protein C17D12.2 protein.
          Length = 514

 Score = 40.7 bits (91), Expect = 4e-04
 Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 16/151 (10%)
 Frame = +1

Query: 22  KLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKA 183
           KL V  IP  + +  +  LF   GK+    ++ ++      G  F+ Y   D AV+ +  
Sbjct: 30  KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89

Query: 184 FNG---LLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGR 354
            +    L   N+ ++V  A  +     P     D  L+I  L  + +  ++  LFA FG 
Sbjct: 90  LHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGE 149

Query: 355 IINSRI-------AAGIAFVLYEHQYEAXRA 426
           +    +       + G AFV Y+H  +A  A
Sbjct: 150 LDEVTVLRGADGASKGCAFVKYKHGLDAHMA 180



 Score = 31.5 bits (68), Expect = 0.26
 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
 Frame = +1

Query: 25  LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG------YGFVEYTRPDDAVKARKAF 186
           L + ++P+      +  +F+  G + S K+  +R       +GFV Y     +  A  A 
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490

Query: 187 NGLLMQNKTLKVSHALLNPELKP 255
           NG  +  K LKV       E +P
Sbjct: 491 NGFQIGMKRLKVQLKRPRNESRP 513



 Score = 30.3 bits (65), Expect = 0.60
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
 Frame = +1

Query: 256 PTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRIA--------AGIAFVLYEHQY 411
           P K      L++  +P  L  +DL  LF QFG+I    I          G AF+ Y H+ 
Sbjct: 22  PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81

Query: 412 EAXR 423
            A R
Sbjct: 82  SAVR 85



 Score = 29.5 bits (63), Expect = 1.1
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +1

Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
           NL+I +LP E    +L  +FA FG I+++++
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKV 460


>AY342388-1|AAQ19851.1|  514|Caenorhabditis elegans putative
           RNA-binding protein protein.
          Length = 514

 Score = 40.7 bits (91), Expect = 4e-04
 Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 16/151 (10%)
 Frame = +1

Query: 22  KLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKA 183
           KL V  IP  + +  +  LF   GK+    ++ ++      G  F+ Y   D AV+ +  
Sbjct: 30  KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89

Query: 184 FNG---LLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGR 354
            +    L   N+ ++V  A  +     P     D  L+I  L  + +  ++  LFA FG 
Sbjct: 90  LHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGE 149

Query: 355 IINSRI-------AAGIAFVLYEHQYEAXRA 426
           +    +       + G AFV Y+H  +A  A
Sbjct: 150 LDEVTVLRGADGASKGCAFVKYKHGLDAHMA 180



 Score = 31.5 bits (68), Expect = 0.26
 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
 Frame = +1

Query: 25  LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG------YGFVEYTRPDDAVKARKAF 186
           L + ++P+      +  +F+  G + S K+  +R       +GFV Y     +  A  A 
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490

Query: 187 NGLLMQNKTLKVSHALLNPELKP 255
           NG  +  K LKV       E +P
Sbjct: 491 NGFQIGMKRLKVQLKRPRNESRP 513



 Score = 30.3 bits (65), Expect = 0.60
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
 Frame = +1

Query: 256 PTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRIA--------AGIAFVLYEHQY 411
           P K      L++  +P  L  +DL  LF QFG+I    I          G AF+ Y H+ 
Sbjct: 22  PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81

Query: 412 EAXR 423
            A R
Sbjct: 82  SAVR 85



 Score = 29.5 bits (63), Expect = 1.1
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +1

Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
           NL+I +LP E    +L  +FA FG I+++++
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKV 460


>Z78536-3|CAB01717.2|  360|Caenorhabditis elegans Hypothetical
           protein C07A4.1 protein.
          Length = 360

 Score = 39.9 bits (89), Expect = 7e-04
 Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
 Frame = +1

Query: 25  LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN------RGYGFVEYTRPDDAVKARKAF 186
           + V  + + ++ +++ S F+  G++   K+I +      +GYGFV +    +A  A    
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196

Query: 187 NGLLMQNKTLKVSHA-----------LLNPELKPPTKPEADWNLYICNLPNELTLQDLHG 333
           NG  +  + ++ + A           L   ++   TK + + ++Y+ N+  + T  DL  
Sbjct: 197 NGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKAD-NTSVYVGNISQQTTDADLRD 255

Query: 334 LFAQFGRIINSRI--AAGIAFVLYEHQYEAXRA 426
           LF+ +G I   RI      AFV YE +  A +A
Sbjct: 256 LFSTYGDIAEVRIFKTQRYAFVRYEKKECATKA 288



 Score = 36.3 bits (80), Expect = 0.009
 Identities = 20/69 (28%), Positives = 31/69 (44%)
 Frame = +1

Query: 19  TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKARKAFNGLL 198
           T + V  I +  T   +  LFST G +   ++   + Y FV Y + + A KA    NG  
Sbjct: 237 TSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKE 296

Query: 199 MQNKTLKVS 225
           M    ++ S
Sbjct: 297 MAGNQVRCS 305


>U80455-1|AAB37881.1|  584|Caenorhabditis elegans Elav-type rna
           binding protein familyprotein 1, isoform a protein.
          Length = 584

 Score = 39.9 bits (89), Expect = 7e-04
 Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
 Frame = +1

Query: 4   PEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDA 165
           P+    K+ V  IP    +     LF   G + SC ++      A++G  FV +    DA
Sbjct: 50  PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109

Query: 166 VKARKAFNGLLMQNKTLKVSHALLNP-ELKPP-TKPEADWNLYICNLPNELTLQDLHGLF 339
           ++A+ A + +       KV   + +P ++KP  T+   +  L+I  L  +   ++L  +F
Sbjct: 110 IEAQGALHNI-------KVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIF 162

Query: 340 AQFGRI 357
           A+FG I
Sbjct: 163 AKFGHI 168



 Score = 32.3 bits (70), Expect = 0.15
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
 Frame = +1

Query: 1   GPEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG------YGFVEYTRPDD 162
           GP+ +   L + ++P+      + + F+  G + S K+  ++       +GFV Y     
Sbjct: 495 GPDGA--NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQS 552

Query: 163 AVKARKAFNGLLMQNKTLKV 222
           A  A  A NG  + +K LKV
Sbjct: 553 ATNAISAMNGFQIGSKRLKV 572



 Score = 28.7 bits (61), Expect = 1.8
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +1

Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
           NL+I +LP +    DL   FA FG I+++++
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 530


>U53931-1|AAA98566.1|  584|Caenorhabditis elegans elav-type
           ribonucleoprotein protein.
          Length = 584

 Score = 39.9 bits (89), Expect = 7e-04
 Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
 Frame = +1

Query: 4   PEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDA 165
           P+    K+ V  IP    +     LF   G + SC ++      A++G  FV +    DA
Sbjct: 50  PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109

Query: 166 VKARKAFNGLLMQNKTLKVSHALLNP-ELKPP-TKPEADWNLYICNLPNELTLQDLHGLF 339
           ++A+ A + +       KV   + +P ++KP  T+   +  L+I  L  +   ++L  +F
Sbjct: 110 IEAQGALHNI-------KVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIF 162

Query: 340 AQFGRI 357
           A+FG I
Sbjct: 163 AKFGHI 168



 Score = 32.3 bits (70), Expect = 0.15
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
 Frame = +1

Query: 1   GPEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG------YGFVEYTRPDD 162
           GP+ +   L + ++P+      + + F+  G + S K+  ++       +GFV Y     
Sbjct: 495 GPDGA--NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQS 552

Query: 163 AVKARKAFNGLLMQNKTLKV 222
           A  A  A NG  + +K LKV
Sbjct: 553 ATNAISAMNGFQIGSKRLKV 572



 Score = 28.7 bits (61), Expect = 1.8
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +1

Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
           NL+I +LP +    DL   FA FG I+++++
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 530


>EF523770-1|ABS18836.1|  513|Caenorhabditis elegans ELAV-type RNA
           binding protein variantE protein.
          Length = 513

 Score = 39.9 bits (89), Expect = 7e-04
 Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
 Frame = +1

Query: 4   PEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDA 165
           P+    K+ V  IP    +     LF   G + SC ++      A++G  FV +    DA
Sbjct: 50  PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109

Query: 166 VKARKAFNGLLMQNKTLKVSHALLNP-ELKPP-TKPEADWNLYICNLPNELTLQDLHGLF 339
           ++A+ A + +       KV   + +P ++KP  T+   +  L+I  L  +   ++L  +F
Sbjct: 110 IEAQGALHNI-------KVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIF 162

Query: 340 AQFGRI 357
           A+FG I
Sbjct: 163 AKFGHI 168



 Score = 32.3 bits (70), Expect = 0.15
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
 Frame = +1

Query: 1   GPEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG------YGFVEYTRPDD 162
           GP+ +   L + ++P+      + + F+  G + S K+  ++       +GFV Y     
Sbjct: 424 GPDGA--NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQS 481

Query: 163 AVKARKAFNGLLMQNKTLKV 222
           A  A  A NG  + +K LKV
Sbjct: 482 ATNAISAMNGFQIGSKRLKV 501



 Score = 28.7 bits (61), Expect = 1.8
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +1

Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
           NL+I +LP +    DL   FA FG I+++++
Sbjct: 429 NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 459


>EF523769-1|ABS18835.1|  327|Caenorhabditis elegans ELAV-type RNA
           binding protein variantD protein.
          Length = 327

 Score = 39.9 bits (89), Expect = 7e-04
 Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
 Frame = +1

Query: 4   PEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDA 165
           P+    K+ V  IP    +     LF   G + SC ++      A++G  FV +    DA
Sbjct: 50  PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109

Query: 166 VKARKAFNGLLMQNKTLKVSHALLNP-ELKPP-TKPEADWNLYICNLPNELTLQDLHGLF 339
           ++A+ A + +       KV   + +P ++KP  T+   +  L+I  L  +   ++L  +F
Sbjct: 110 IEAQGALHNI-------KVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIF 162

Query: 340 AQFGRI 357
           A+FG I
Sbjct: 163 AKFGHI 168


>EF523768-1|ABS18834.1|  378|Caenorhabditis elegans ELAV-type RNA
           binding protein variantC protein.
          Length = 378

 Score = 39.9 bits (89), Expect = 7e-04
 Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
 Frame = +1

Query: 4   PEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDA 165
           P+    K+ V  IP    +     LF   G + SC ++      A++G  FV +    DA
Sbjct: 50  PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109

Query: 166 VKARKAFNGLLMQNKTLKVSHALLNP-ELKPP-TKPEADWNLYICNLPNELTLQDLHGLF 339
           ++A+ A + +       KV   + +P ++KP  T+   +  L+I  L  +   ++L  +F
Sbjct: 110 IEAQGALHNI-------KVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIF 162

Query: 340 AQFGRI 357
           A+FG I
Sbjct: 163 AKFGHI 168


>EF523767-1|ABS18833.1|  193|Caenorhabditis elegans ELAV-type RNA
           binding protein variantB protein.
          Length = 193

 Score = 39.9 bits (89), Expect = 7e-04
 Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
 Frame = +1

Query: 4   PEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDA 165
           P+    K+ V  IP    +     LF   G + SC ++      A++G  FV +    DA
Sbjct: 50  PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109

Query: 166 VKARKAFNGLLMQNKTLKVSHALLNP-ELKPP-TKPEADWNLYICNLPNELTLQDLHGLF 339
           ++A+ A + +       KV   + +P ++KP  T+   +  L+I  L  +   ++L  +F
Sbjct: 110 IEAQGALHNI-------KVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIF 162

Query: 340 AQFGRI 357
           A+FG I
Sbjct: 163 AKFGHI 168


>EF523766-1|ABS18832.1|  584|Caenorhabditis elegans ELAV-type RNA
           binding protein variantA protein.
          Length = 584

 Score = 39.9 bits (89), Expect = 7e-04
 Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
 Frame = +1

Query: 4   PEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDA 165
           P+    K+ V  IP    +     LF   G + SC ++      A++G  FV +    DA
Sbjct: 50  PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109

Query: 166 VKARKAFNGLLMQNKTLKVSHALLNP-ELKPP-TKPEADWNLYICNLPNELTLQDLHGLF 339
           ++A+ A + +       KV   + +P ++KP  T+   +  L+I  L  +   ++L  +F
Sbjct: 110 IEAQGALHNI-------KVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIF 162

Query: 340 AQFGRI 357
           A+FG I
Sbjct: 163 AKFGHI 168



 Score = 32.3 bits (70), Expect = 0.15
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
 Frame = +1

Query: 1   GPEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG------YGFVEYTRPDD 162
           GP+ +   L + ++P+      + + F+  G + S K+  ++       +GFV Y     
Sbjct: 495 GPDGA--NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQS 552

Query: 163 AVKARKAFNGLLMQNKTLKV 222
           A  A  A NG  + +K LKV
Sbjct: 553 ATNAISAMNGFQIGSKRLKV 572



 Score = 28.7 bits (61), Expect = 1.8
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +1

Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
           NL+I +LP +    DL   FA FG I+++++
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 530


>Z83127-4|CAB05631.1|  872|Caenorhabditis elegans Hypothetical
           protein T23F6.4 protein.
          Length = 872

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
 Frame = +1

Query: 127 GYGFVEYTRPDDAVKARKAFNGLLMQNKT--LKVSH-------ALLNPELKPPTKPEADW 279
           G+GFV++    DA  A K   G L+   +  LK+SH       AL   E+K   + E   
Sbjct: 690 GFGFVQFYTAFDAKTALKDMQGELLDGHSLELKISHRENADKGALKRKEVKQKEQGECT- 748

Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
            L + NLP E +++++  LF  FG +   RI
Sbjct: 749 KLLVRNLPFEASVKEVETLFETFGAVKTIRI 779



 Score = 29.5 bits (63), Expect = 1.1
 Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
 Frame = +1

Query: 19  TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIA-------NRGYGFVEYTRPDDAVKA 174
           TKL+V  +P   +   + +LF T G +++ ++         +RG+GFV++   D+A +A
Sbjct: 748 TKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHRA 806


>U79157-1|AAC26982.1|  496|Caenorhabditis elegans splicing factor
           U2AF65 protein.
          Length = 496

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
 Frame = +1

Query: 10  ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKA 174
           +S  K+ +  +P  +T+D +  L  + G L++  L  +     +GY F EY  P    +A
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQA 347

Query: 175 RKAFNGLLMQNKTLKVSHALLNPE 246
               NG+ + +K L V  A  N +
Sbjct: 348 IAGLNGMQLGDKQLVVQLACANQQ 371


>AC024875-3|AAK29989.1|  496|Caenorhabditis elegans U2af splicing
           factor protein 1,isoform a protein.
          Length = 496

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
 Frame = +1

Query: 10  ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKA 174
           +S  K+ +  +P  +T+D +  L  + G L++  L  +     +GY F EY  P    +A
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQA 347

Query: 175 RKAFNGLLMQNKTLKVSHALLNPE 246
               NG+ + +K L V  A  N +
Sbjct: 348 IAGLNGMQLGDKQLVVQLACANQQ 371


>AC024875-2|AAM44400.1|  471|Caenorhabditis elegans U2af splicing
           factor protein 1,isoform d protein.
          Length = 471

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
 Frame = +1

Query: 10  ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKA 174
           +S  K+ +  +P  +T+D +  L  + G L++  L  +     +GY F EY  P    +A
Sbjct: 263 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQA 322

Query: 175 RKAFNGLLMQNKTLKVSHALLNPE 246
               NG+ + +K L V  A  N +
Sbjct: 323 IAGLNGMQLGDKQLVVQLACANQQ 346


>AC024875-1|AAL00879.1|  474|Caenorhabditis elegans U2af splicing
           factor protein 1,isoform c protein.
          Length = 474

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
 Frame = +1

Query: 10  ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKA 174
           +S  K+ +  +P  +T+D +  L  + G L++  L  +     +GY F EY  P    +A
Sbjct: 266 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQA 325

Query: 175 RKAFNGLLMQNKTLKVSHALLNPE 246
               NG+ + +K L V  A  N +
Sbjct: 326 IAGLNGMQLGDKQLVVQLACANQQ 349


>Z36238-4|CAD82915.1|  286|Caenorhabditis elegans Hypothetical
           protein R74.5b protein.
          Length = 286

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
 Frame = +1

Query: 76  LFSTMGKLESCKLIAN----RGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHA 231
           +F  +G +   ++I N    +G+GFV    PDDA +AR  FNG  ++ + ++V+ A
Sbjct: 1   MFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLA 56


>Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical
           protein C08B11.5 protein.
          Length = 388

 Score = 38.3 bits (85), Expect = 0.002
 Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
 Frame = +1

Query: 25  LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAF 186
           + V  + E +++ +++ L    G + S  +  +R      G+GFVE+   +DA  A K  
Sbjct: 15  IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74

Query: 187 NGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRII 360
           N + +  K +KV+ A  + +       +   N+++ NL  E+  + L+  F+ FG I+
Sbjct: 75  NMIKLYGKPIKVNKASAHEK-----NMDVGANIFVGNLDPEVDEKLLYDTFSAFGVIL 127


>U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA
           binding protein protein.
          Length = 398

 Score = 38.3 bits (85), Expect = 0.002
 Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
 Frame = +1

Query: 25  LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAF 186
           + V  + E +++ +++ L    G + S  +  +R      G+GFVE+   +DA  A K  
Sbjct: 25  IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84

Query: 187 NGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRII 360
           N + +  K +KV+ A  + +       +   N+++ NL  E+  + L+  F+ FG I+
Sbjct: 85  NMIKLYGKPIKVNKASAHEK-----NMDVGANIFVGNLDPEVDEKLLYDTFSAFGVIL 137


>Z83230-6|CAB05746.1|  336|Caenorhabditis elegans Hypothetical
           protein F56A8.6 protein.
          Length = 336

 Score = 37.9 bits (84), Expect = 0.003
 Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
 Frame = +1

Query: 1   GPEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDD 162
           G + S   + V  I   +++D + S+FS  G + S K++ +R      GYGF+E+     
Sbjct: 12  GNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQT 71

Query: 163 AVKARKAFNGLLMQNKTLKVSHA 231
           A  A +  NG  +  + L+V  A
Sbjct: 72  AEVAIRNLNGYELSGRILRVDSA 94


>AC084197-11|AAM44397.1|  305|Caenorhabditis elegans Homologous to
           drosophila sqd (squid)protein protein 1, isoform a
           protein.
          Length = 305

 Score = 35.9 bits (79), Expect = 0.012
 Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 15/150 (10%)
 Frame = +1

Query: 22  KLIVNYI-PEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDAVKARK 180
           K+ V  I PEV  +D+  S F+  G++   ++        +RG+ FVE+T  +    A  
Sbjct: 30  KIFVGGISPEVNNEDLS-SHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLA-- 86

Query: 181 AFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRII 360
               L  + +T+K        E+KP  K   +  +++  LP++ + QDL   F QFG++ 
Sbjct: 87  ----LAAREQTIKGKSV----EVKP-AKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVD 137

Query: 361 N--------SRIAAGIAFVLYEHQYEAXRA 426
           +        ++     AF+++E +  A +A
Sbjct: 138 DIEWPFDKQTKARRNFAFIVFEEEESADKA 167


>AC084197-10|AAY43984.1|  308|Caenorhabditis elegans Homologous to
           drosophila sqd (squid)protein protein 1, isoform b
           protein.
          Length = 308

 Score = 35.9 bits (79), Expect = 0.012
 Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 15/150 (10%)
 Frame = +1

Query: 22  KLIVNYI-PEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDAVKARK 180
           K+ V  I PEV  +D+  S F+  G++   ++        +RG+ FVE+T  +    A  
Sbjct: 30  KIFVGGISPEVNNEDLS-SHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLA-- 86

Query: 181 AFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRII 360
               L  + +T+K        E+KP  K   +  +++  LP++ + QDL   F QFG++ 
Sbjct: 87  ----LAAREQTIKGKSV----EVKP-AKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVD 137

Query: 361 N--------SRIAAGIAFVLYEHQYEAXRA 426
           +        ++     AF+++E +  A +A
Sbjct: 138 DIEWPFDKQTKARRNFAFIVFEEEESADKA 167


>Z81108-4|CAB03237.1|   85|Caenorhabditis elegans Hypothetical
           protein R09B3.3 protein.
          Length = 85

 Score = 35.1 bits (77), Expect = 0.021
 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
 Frame = +1

Query: 31  VNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAFNG 192
           V   P   T+D + + FS  G + + +++ +R      G+ FVE+T    A +A   FNG
Sbjct: 8   VGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQFNG 67

Query: 193 LLMQNKTLKVSHA 231
           +    + L+V+ A
Sbjct: 68  VDFNGRALRVNLA 80



 Score = 29.9 bits (64), Expect = 0.80
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 8/58 (13%)
 Frame = +1

Query: 277 WNLYICNLPNELTLQDLHGLFAQFGRIINSRIAA--------GIAFVLYEHQYEAXRA 426
           +++Y+ N P + T  DL   F+Q G + N RI          G AFV +  +  A RA
Sbjct: 4   FSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRA 61


>Z32683-11|CAA83626.1|  142|Caenorhabditis elegans Hypothetical
           protein R07E5.14 protein.
          Length = 142

 Score = 34.7 bits (76), Expect = 0.028
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
 Frame = +1

Query: 256 PTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRI--------AAGIAFVLYEHQY 411
           P +    W +++ N+  E T  D+H  F+++G+I N  +          G A V YE Q 
Sbjct: 48  PQRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQK 107

Query: 412 EAXRA 426
           EA  A
Sbjct: 108 EANEA 112



 Score = 27.5 bits (58), Expect = 4.3
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
 Frame = +1

Query: 25  LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAF 186
           + V  I E  T+D +   FS  GK+++  L  +R      GY  VEY    +A +A    
Sbjct: 57  VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116

Query: 187 NGLLMQNKTLKV 222
           N   +  + +KV
Sbjct: 117 NDTDLLGQNVKV 128


>U41007-10|AAL32214.1|  118|Caenorhabditis elegans Sr protein
           (splicing factor) protein6, isoform c protein.
          Length = 118

 Score = 34.3 bits (75), Expect = 0.037
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = +1

Query: 274 DWNLYICNLPNELTLQDLHGLFAQFGRIIN---SRIAAGIAFVLYEHQYEAXRA 426
           D  +Y+  LP++ T Q+L  +F +FGRI     +R   G AFV Y+   +A  A
Sbjct: 2   DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDA 55


>U41007-9|AAL32213.1|  153|Caenorhabditis elegans Sr protein
           (splicing factor) protein6, isoform b protein.
          Length = 153

 Score = 34.3 bits (75), Expect = 0.037
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = +1

Query: 274 DWNLYICNLPNELTLQDLHGLFAQFGRIIN---SRIAAGIAFVLYEHQYEAXRA 426
           D  +Y+  LP++ T Q+L  +F +FGRI     +R   G AFV Y+   +A  A
Sbjct: 2   DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDA 55


>U41007-8|AAA82270.1|  179|Caenorhabditis elegans Sr protein
           (splicing factor) protein6, isoform a protein.
          Length = 179

 Score = 34.3 bits (75), Expect = 0.037
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = +1

Query: 274 DWNLYICNLPNELTLQDLHGLFAQFGRIIN---SRIAAGIAFVLYEHQYEAXRA 426
           D  +Y+  LP++ T Q+L  +F +FGRI     +R   G AFV Y+   +A  A
Sbjct: 2   DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDA 55


>Z81106-3|CAB03222.1|   84|Caenorhabditis elegans Hypothetical
           protein R06C1.4 protein.
          Length = 84

 Score = 33.9 bits (74), Expect = 0.049
 Identities = 17/73 (23%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
 Frame = +1

Query: 31  VNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAFNG 192
           V  +P   T++ + + F+ +G + + +++ +R      G+ FVE++    A +A +  NG
Sbjct: 10  VGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQLNG 69

Query: 193 LLMQNKTLKVSHA 231
           +    + L+V++A
Sbjct: 70  VAFNGRNLRVNYA 82


>AC024826-10|AAM97977.1|  435|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.3c protein.
          Length = 435

 Score = 33.9 bits (74), Expect = 0.049
 Identities = 17/77 (22%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
 Frame = +1

Query: 10  ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIA-----NRGYGFVEYTRPDDAVKA 174
           + PT ++V  +   + + M+  +F + G++E   L       NRG+  + +   DDA K+
Sbjct: 124 KGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKS 183

Query: 175 RKAFNGLLMQNKTLKVS 225
            +  N   +  + +++S
Sbjct: 184 CEQLNNFELAGRCIRLS 200


>AC024826-8|AAF60795.2|  580|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.3a protein.
          Length = 580

 Score = 33.9 bits (74), Expect = 0.049
 Identities = 17/77 (22%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
 Frame = +1

Query: 10  ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIA-----NRGYGFVEYTRPDDAVKA 174
           + PT ++V  +   + + M+  +F + G++E   L       NRG+  + +   DDA K+
Sbjct: 269 KGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKS 328

Query: 175 RKAFNGLLMQNKTLKVS 225
            +  N   +  + +++S
Sbjct: 329 CEQLNNFELAGRCIRLS 345


>U23484-17|AAK68296.1|  367|Caenorhabditis elegans Tudor domain plus
           rrm motif protein1 protein.
          Length = 367

 Score = 33.5 bits (73), Expect = 0.065
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
 Frame = +1

Query: 31  VNYIPEVMTQDMMFSLFSTMGKLESCKLI--ANRG---YGFVEYTRPDDAVKARKAFN-- 189
           +  IP+      +F +F   GK+  C+++  +N G    GFV      DA + RK  N  
Sbjct: 17  IRNIPKAWNDWNLFHVFQNFGKVSYCRVVGQSNDGQVQLGFVNMMSVADADEVRKNLNDG 76

Query: 190 GLLMQNKTLKVS-HALLNPELKP 255
            L+ +N TLKV+ H  +   L P
Sbjct: 77  NLIGENFTLKVTDHKNVGGSLLP 99


>AF303251-1|AAG50209.1|  367|Caenorhabditis elegans 2F713 protein.
          Length = 367

 Score = 33.5 bits (73), Expect = 0.065
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
 Frame = +1

Query: 31  VNYIPEVMTQDMMFSLFSTMGKLESCKLI--ANRG---YGFVEYTRPDDAVKARKAFN-- 189
           +  IP+      +F +F   GK+  C+++  +N G    GFV      DA + RK  N  
Sbjct: 17  IRNIPKAWNDWNLFHVFQNFGKVSYCRVVGQSNDGQVQLGFVNMMSVADADEVRKNLNDG 76

Query: 190 GLLMQNKTLKVS-HALLNPELKP 255
            L+ +N TLKV+ H  +   L P
Sbjct: 77  NLIGENFTLKVTDHKNVGGSLLP 99


>Z81108-1|CAB03236.1|   83|Caenorhabditis elegans Hypothetical
           protein R09B3.2 protein.
          Length = 83

 Score = 33.1 bits (72), Expect = 0.086
 Identities = 17/73 (23%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
 Frame = +1

Query: 31  VNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAFNG 192
           V   P   T++ + + FS++G++ + +++ +R      G+ F+E+     A +A +  NG
Sbjct: 9   VGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQMNG 68

Query: 193 LLMQNKTLKVSHA 231
                + L+V+ A
Sbjct: 69  AEFNGRPLRVNLA 81


>Z50044-2|CAA90354.1|  256|Caenorhabditis elegans Hypothetical
           protein F22B5.2 protein.
          Length = 256

 Score = 33.1 bits (72), Expect = 0.086
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
 Frame = +1

Query: 289 ICNLPNELTLQDLHGLFAQFGRIINSRIA--------AGIAFVLYEHQYEAXRA 426
           + NLP E+   +L  LF + GR+I   IA         G AFV +E + +A RA
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARA 233



 Score = 32.3 bits (70), Expect = 0.15
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
 Frame = +1

Query: 31  VNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAFNG 192
           V  +P+ M +D +  LF  +G++    +  ++      G+ FV +   DDA +A    N 
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 239

Query: 193 LLMQNKTLKV 222
           + M +  LKV
Sbjct: 240 IRMYHMVLKV 249


>U80455-2|AAB37882.2|  420|Caenorhabditis elegans Elav-type rna
           binding protein familyprotein 1, isoform b protein.
          Length = 420

 Score = 32.3 bits (70), Expect = 0.15
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
 Frame = +1

Query: 1   GPEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG------YGFVEYTRPDD 162
           GP+ +   L + ++P+      + + F+  G + S K+  ++       +GFV Y     
Sbjct: 331 GPDGA--NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQS 388

Query: 163 AVKARKAFNGLLMQNKTLKV 222
           A  A  A NG  + +K LKV
Sbjct: 389 ATNAISAMNGFQIGSKRLKV 408



 Score = 28.7 bits (61), Expect = 1.8
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +1

Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
           NL+I +LP +    DL   FA FG I+++++
Sbjct: 336 NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 366


>U55363-5|AAA97963.1|  351|Caenorhabditis elegans Spindle
           orientation defective protein4 protein.
          Length = 351

 Score = 31.5 bits (68), Expect = 0.26
 Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
 Frame = +1

Query: 22  KLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN----RGYGFVEYTRPDDAVKARKAFN 189
           ++ V+ IP    +  + ++F   G++ S +++ N    +G+GFV     +   KAR A +
Sbjct: 52  RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAALH 111

Query: 190 GLLMQNKTLKVSHA 231
              +Q + ++V  A
Sbjct: 112 ESHVQGRIIEVRRA 125



 Score = 31.1 bits (67), Expect = 0.35
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = +1

Query: 247 LKPPTKPEA---DWNLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
           +KP T+  A   D  +Y+ N+P     QDL  +F  +GR+++  I
Sbjct: 38  VKPKTREPASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEI 82


>AB052819-1|BAC65239.1|  351|Caenorhabditis elegans PIP-1 protein.
          Length = 351

 Score = 31.5 bits (68), Expect = 0.26
 Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
 Frame = +1

Query: 22  KLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN----RGYGFVEYTRPDDAVKARKAFN 189
           ++ V+ IP    +  + ++F   G++ S +++ N    +G+GFV     +   KAR A +
Sbjct: 52  RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAALH 111

Query: 190 GLLMQNKTLKVSHA 231
              +Q + ++V  A
Sbjct: 112 ESHVQGRIIEVRRA 125



 Score = 31.1 bits (67), Expect = 0.35
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = +1

Query: 247 LKPPTKPEA---DWNLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
           +KP T+  A   D  +Y+ N+P     QDL  +F  +GR+++  I
Sbjct: 38  VKPKTREPASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEI 82


>AL117204-22|CAB55151.1|  331|Caenorhabditis elegans Hypothetical
           protein Y116A8C.34 protein.
          Length = 331

 Score = 31.1 bits (67), Expect = 0.35
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
 Frame = +1

Query: 4   PEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN------RGYGFVEYTRPDDA 165
           P      L V    E +T+ ++ + F   G + +  +  +      RG+GFVE+   +DA
Sbjct: 6   PHNRKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDA 65

Query: 166 VKARKAFNGLLMQNKTLKVSHA 231
             A    N   +  KT++V+ A
Sbjct: 66  AMAIDNMNESELFGKTIRVNFA 87


>AL132904-14|CAC35847.2|  258|Caenorhabditis elegans Hypothetical
           protein Y111B2A.18 protein.
          Length = 258

 Score = 30.3 bits (65), Expect = 0.60
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +1

Query: 256 PTKPEADWNLYICNLPNELTLQDLHGLFAQFGRI----INSRIAAGIAFVLYEHQYEAXR 423
           P     D  +Y+ NLP ++  +++  +F ++GRI    I S      AFV +E   +A  
Sbjct: 2   PRGGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAED 61

Query: 424 A 426
           A
Sbjct: 62  A 62


>AF242767-1|AAG36874.1|  258|Caenorhabditis elegans SF2 protein.
          Length = 258

 Score = 30.3 bits (65), Expect = 0.60
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +1

Query: 256 PTKPEADWNLYICNLPNELTLQDLHGLFAQFGRI----INSRIAAGIAFVLYEHQYEAXR 423
           P     D  +Y+ NLP ++  +++  +F ++GRI    I S      AFV +E   +A  
Sbjct: 2   PRGGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAED 61

Query: 424 A 426
           A
Sbjct: 62  A 62


>AC024818-2|AAF60781.1|  302|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 262 protein.
          Length = 302

 Score = 30.3 bits (65), Expect = 0.60
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = +1

Query: 121 NRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKV 222
           ++GYGFV +   +D V+A +  +G  + N+ +K+
Sbjct: 243 SKGYGFVSFRDSEDYVRAMREMDGKYVGNRPIKL 276


>U00052-10|AAK21429.2|  289|Caenorhabditis elegans Rnp (rrm rna
           binding domain) containingprotein 5 protein.
          Length = 289

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 121 NRGYGFVEYTRPDDAVKARKAFNG 192
           +RGYG+VEY   +DA K+ K  +G
Sbjct: 174 HRGYGYVEYDNLEDAEKSIKHMDG 197


>Z82286-3|CAB05309.1|  781|Caenorhabditis elegans Hypothetical
           protein W02A2.6 protein.
          Length = 781

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +1

Query: 136 FVEYTRPDDAVKARKAFNGLLMQNKTLKV 222
           F E+T   D  KA  AF GLL+  K +KV
Sbjct: 732 FNEFTADHDRKKAATAFEGLLLSLKNMKV 760


>Z66521-8|CAA91394.1|  281|Caenorhabditis elegans Hypothetical
           protein W02B12.2 protein.
          Length = 281

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +1

Query: 283 LYICNLPNELTLQDLHGLFAQFGRIINSRIAAGIAFVLYEHQYEAXRA 426
           +YI  LPN  + +D+   F  +G++ +  +  G  FV ++ Q +A  A
Sbjct: 4   VYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDA 51


>AL032626-17|CAA21536.1|  282|Caenorhabditis elegans Hypothetical
           protein Y37D8A.21 protein.
          Length = 282

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 244 ELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRII 360
           E+KP   P  +  +Y+ N   E+  + L  LF Q G ++
Sbjct: 2   EIKPTPSPPEERTIYVANFSEEVDEELLEELFIQAGPVV 40


>AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical
           protein R11E3.3 protein.
          Length = 931

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +1

Query: 145 YTRPDDAVKARKAFNGLLMQNKTLKVSHALLNPELKPPTKP 267
           Y+ P DA+   K FN ++++     V    ++P+LK   KP
Sbjct: 156 YSGPMDAIPMEKFFNKVILEADKKAVPKGSIDPKLKVDPKP 196


>U80455-3|AAO38606.1|  145|Caenorhabditis elegans Elav-type rna
           binding protein familyprotein 1, isoform c protein.
          Length = 145

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +1

Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
           NL+I +LP +    DL   FA FG I+++++
Sbjct: 77  NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 107


>U23484-7|ABB88232.1|  738|Caenorhabditis elegans Hypothetical
           protein EEED8.10a protein.
          Length = 738

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 22  KLIVNYIPEVMTQDMMFSLFSTMGKLESCKL 114
           K++V+ I   +TQ  + S FS  GK+ SC L
Sbjct: 113 KIVVSNISAKVTQSQLQSFFSQYGKITSCIL 143


>Z97628-2|CAB10726.2|  427|Caenorhabditis elegans Hypothetical
           protein F39H2.2a protein.
          Length = 427

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
 Frame = +1

Query: 25  LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAF 186
           L V  +  V T + +  +FS  GK+ +C+++ +R       Y F+E+       +A    
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302

Query: 187 NGLLMQNKTLKV 222
           + +L+ ++ + V
Sbjct: 303 DNVLIDDRRIHV 314



 Score = 27.9 bits (59), Expect = 3.2
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 283 LYICNLPNELTLQDLHGLFAQFGRIINSRI 372
           L++C L    T +DL  +F++FG+I N  I
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEI 272


>Z81080-5|CAB03088.2|  427|Caenorhabditis elegans Hypothetical
           protein F39H2.2a protein.
          Length = 427

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
 Frame = +1

Query: 25  LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAF 186
           L V  +  V T + +  +FS  GK+ +C+++ +R       Y F+E+       +A    
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302

Query: 187 NGLLMQNKTLKV 222
           + +L+ ++ + V
Sbjct: 303 DNVLIDDRRIHV 314



 Score = 27.9 bits (59), Expect = 3.2
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 283 LYICNLPNELTLQDLHGLFAQFGRIINSRI 372
           L++C L    T +DL  +F++FG+I N  I
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEI 272


>Z81080-2|CAD56584.1|  358|Caenorhabditis elegans Hypothetical
           protein F39H2.2b protein.
          Length = 358

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
 Frame = +1

Query: 25  LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAF 186
           L V  +  V T + +  +FS  GK+ +C+++ +R       Y F+E+       +A    
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233

Query: 187 NGLLMQNKTLKV 222
           + +L+ ++ + V
Sbjct: 234 DNVLIDDRRIHV 245



 Score = 27.9 bits (59), Expect = 3.2
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 283 LYICNLPNELTLQDLHGLFAQFGRIINSRI 372
           L++C L    T +DL  +F++FG+I N  I
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEI 203


>Z70203-1|CAA94104.1|  456|Caenorhabditis elegans Hypothetical
           protein C05G5.1 protein.
          Length = 456

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = -1

Query: 288 VEIPVGFRFCWWL-KFWIK 235
           + IPVGF  CWW+ KF ++
Sbjct: 64  LSIPVGFLACWWIDKFGLR 82


>U23172-15|AAN63408.1|  374|Caenorhabditis elegans Hypothetical
           protein F25B5.7d protein.
          Length = 374

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +1

Query: 253 PPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRIAA-GIAFVLYEHQYEAXRA 426
           P  K      L++ NLPNE+   +L  LF+  G I    ++  G AF+  + +  A  A
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESA 166


>U23172-12|ABH03526.1|  562|Caenorhabditis elegans Hypothetical
           protein F25B5.7a protein.
          Length = 562

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +1

Query: 253 PPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRIAA-GIAFVLYEHQYEAXRA 426
           P  K      L++ NLPNE+   +L  LF+  G I    ++  G AF+  + +  A  A
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESA 166


>U21320-5|AAA62536.2|  332|Caenorhabditis elegans Rnp (rrm rna
           binding domain) containingprotein 7 protein.
          Length = 332

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
 Frame = +1

Query: 10  ESPTK-LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVK 171
           E P + L V  I    ++  +   F   GK++   ++ +     RGY F+EY+   +   
Sbjct: 100 EDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHT 159

Query: 172 ARKAFNGLLMQNKTLKVSH 228
           A K  +G+ +  K L V +
Sbjct: 160 AYKKADGIKVDGKRLVVDY 178


>Z92826-4|CAB07322.1|  309|Caenorhabditis elegans Hypothetical
           protein C18D11.4 protein.
          Length = 309

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
 Frame = +1

Query: 16  PTKLI-VNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKA 174
           P+K + V  +    T+  +  +F   G++  C L+ +R      G+GF+ +   +DA  A
Sbjct: 74  PSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAA 133

Query: 175 RKAFNGLLMQNKTLKVSHAL 234
           R       +    ++V  +L
Sbjct: 134 RDKLCNTDLDGHKIRVDFSL 153


>U23450-2|AAK31468.1|  302|Caenorhabditis elegans Hypothetical
           protein C30B5.4 protein.
          Length = 302

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
 Frame = +1

Query: 52  MTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAFNGLLMQNKT 213
           +++  + ++FS  G++ +  LI ++      G+ F+ Y      + A   FNG+ +  + 
Sbjct: 49  LSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNFNGISLHKRM 108

Query: 214 LKVSHALLNPELK-PPTKPEAD 276
           ++V H     E K P  K +AD
Sbjct: 109 IRVDHV---EEYKVPKYKEDAD 127


>Z81038-2|CAB02757.1|  454|Caenorhabditis elegans Hypothetical
           protein C25A1.4 protein.
          Length = 454

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
 Frame = +1

Query: 61  DMMFSLFSTMGKLESC-----KLIANRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVS 225
           D ++ +F   GK+        K   ++G   ++YT P +AV+A    NG  + ++ L V 
Sbjct: 202 DKLYEVFGMAGKITWMDFRIDKEGKSKGVCVIQYTHPIEAVQAVSMLNGQRLFDRNLVVK 261

Query: 226 HALLNPELK 252
               + EL+
Sbjct: 262 MDRFDKELE 270


>U23172-14|AAL02495.1|  165|Caenorhabditis elegans Hypothetical
           protein F25B5.7b protein.
          Length = 165

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 253 PPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRIAA-GIAFV 393
           P  K      L++ NLPNE+   +L  LF+  G I    ++  G AF+
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFL 155


>AL032631-4|CAE54917.1|  586|Caenorhabditis elegans Hypothetical
           protein Y106G6H.2c protein.
          Length = 586

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
 Frame = +1

Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI------AAGIAFVLYEHQYEAXRA 426
           N+Y+ N  +    + L  LFA+FG I +  +      + G  FV + +  EA  A
Sbjct: 154 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETA 208


>AC006605-3|AAK85442.1|  933|Caenorhabditis elegans Hypothetical
           protein C07H6.4 protein.
          Length = 933

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
           N+Y+ N+P+ +T  DL   F  FG +   +I
Sbjct: 201 NVYVSNIPHSVTEDDLLFTFGSFGPLAALKI 231


>Z70312-2|CAA94386.2|  396|Caenorhabditis elegans Hypothetical
           protein ZC168.3 protein.
          Length = 396

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -2

Query: 386 AMPAAMRELIILPNCA-NNPCKS 321
           AMP AMR L+I   CA NNP +S
Sbjct: 259 AMPLAMRYLLIAAYCASNNPHQS 281


>Z49911-12|CAD30448.1|  137|Caenorhabditis elegans Hypothetical
           protein D2089.1b protein.
          Length = 137

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +1

Query: 1   GPEESPTKLI-VNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG 129
           G E+   K++ V  I    T+D ++++F+ +GK++  K+  + G
Sbjct: 3   GEEKEKVKILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEG 46


>Z49911-11|CAA90135.2|  452|Caenorhabditis elegans Hypothetical
           protein D2089.1a protein.
          Length = 452

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +1

Query: 1   GPEESPTKLI-VNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG 129
           G E+   K++ V  I    T+D ++++F+ +GK++  K+  + G
Sbjct: 3   GEEKEKVKILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEG 46


>Z36948-7|CAD30436.1|  137|Caenorhabditis elegans Hypothetical
           protein D2089.1b protein.
          Length = 137

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +1

Query: 1   GPEESPTKLI-VNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG 129
           G E+   K++ V  I    T+D ++++F+ +GK++  K+  + G
Sbjct: 3   GEEKEKVKILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEG 46


>Z36948-6|CAA85414.2|  452|Caenorhabditis elegans Hypothetical
           protein D2089.1a protein.
          Length = 452

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +1

Query: 1   GPEESPTKLI-VNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG 129
           G E+   K++ V  I    T+D ++++F+ +GK++  K+  + G
Sbjct: 3   GEEKEKVKILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEG 46


>U28738-11|AAK68399.3|  166|Caenorhabditis elegans Sr protein
           (splicing factor) protein5, isoform b protein.
          Length = 166

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +1

Query: 283 LYICNLPNELTLQDLHGLFAQFGRIINSRIAAGIAFVLYEHQYEAXRA 426
           LY+  +P     +D+      +G+I N  +  G AFV +E   +A  A
Sbjct: 4   LYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDA 51


>U28738-10|AAK72066.3|  208|Caenorhabditis elegans Sr protein
           (splicing factor) protein5, isoform d protein.
          Length = 208

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +1

Query: 283 LYICNLPNELTLQDLHGLFAQFGRIINSRIAAGIAFVLYEHQYEAXRA 426
           LY+  +P     +D+      +G+I N  +  G AFV +E   +A  A
Sbjct: 4   LYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDA 51


>U28738-9|AAA68314.3|  208|Caenorhabditis elegans Sr protein
           (splicing factor) protein5, isoform a protein.
          Length = 208

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +1

Query: 283 LYICNLPNELTLQDLHGLFAQFGRIINSRIAAGIAFVLYEHQYEAXRA 426
           LY+  +P     +D+      +G+I N  +  G AFV +E   +A  A
Sbjct: 4   LYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDA 51


>U39997-3|AAK68389.1|  498|Caenorhabditis elegans Human daz (deleted
           in azoospermia)homolog protein 1 protein.
          Length = 498

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
 Frame = +1

Query: 16  PTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARK 180
           P ++ V   P   T+  +   F     ++  K++ +     +GYGF+ +   D A + RK
Sbjct: 65  PNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEEIRK 124


>AL161712-13|CAC70137.1|  830|Caenorhabditis elegans Hypothetical
           protein Y66D12A.17 protein.
          Length = 830

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +1

Query: 136 FVEYTRPDDAVKARKAFNGLLMQNKTLKVSHALLNPELKPPTK 264
           FV+     DAVK+ K F  + M   T    HAL   +L  P++
Sbjct: 300 FVQLKNSSDAVKSLKQFFDMSMLEITENSKHALETLKLMSPSQ 342


>AB025253-1|BAA88577.1|  499|Caenorhabditis elegans DAZ-1 protein.
          Length = 499

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
 Frame = +1

Query: 16  PTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARK 180
           P ++ V   P   T+  +   F     ++  K++ +     +GYGF+ +   D A + RK
Sbjct: 66  PNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEEIRK 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,365,202
Number of Sequences: 27780
Number of extensions: 176730
Number of successful extensions: 665
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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