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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0039
         (639 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47808-5|CAA87773.1|  294|Caenorhabditis elegans Hypothetical pr...    58   7e-09
AF067219-13|AAC17024.1|  362|Caenorhabditis elegans Proteasome r...    41   9e-04
Z68760-4|CAE17822.1|  160|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z81493-1|CAB04039.1|  178|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AL132951-5|CAC44307.1|  426|Caenorhabditis elegans Hypothetical ...    28   6.5  
Z70286-2|CAA94290.1|  529|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AJ582071-1|CAE46541.1|  529|Caenorhabditis elegans flavin monoox...    27   8.6  
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu...    27   8.6  
AF067617-4|AAC17557.1|  381|Caenorhabditis elegans Hypothetical ...    27   8.6  

>Z47808-5|CAA87773.1|  294|Caenorhabditis elegans Hypothetical
           protein D2013.7 protein.
          Length = 294

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
 Frame = +1

Query: 13  NISVKVHPVVLFQIVDAYERR------NADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEH 174
           N++V VHP V   +VD + RR      N    + +GTL+G  +KG ++VTNCF +P  E 
Sbjct: 4   NLTVNVHPGVYMNVVDTHMRRTKSSAKNTGQEKCMGTLMGYYEKGSIQVTNCFAIPFNES 63

Query: 175 ADQVEAELNYAMDVYELNRRVNSSE 249
            D +E +  +   +    ++ + +E
Sbjct: 64  NDDLEIDDQFNQQMISALKKTSPNE 88



 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 14/99 (14%)
 Frame = +3

Query: 255 VGWWATGNEVTNHSSVIHEYYSRECRE--------PVHV-TLDTSLAGG---RMGLRAYV 398
           VGW+ T +++T+   + H+YY R   E        P+ V T+DT+ +G    RM +RAY+
Sbjct: 91  VGWFLTTSDITSSCLIYHDYYVRVITEASARRESPPIVVLTIDTTFSGDMSKRMPVRAYL 150

Query: 399 CVPLGVPN--GKQGCMFTPVDVTLTCYEPEIVGLQVCQK 509
               G+P   G    +F P+ V L  +  E+V +Q+ +K
Sbjct: 151 RSKAGIPGAAGPHCAIFNPLRVELAAFPGELVAMQLIEK 189


>AF067219-13|AAC17024.1|  362|Caenorhabditis elegans Proteasome
           regulatory particle,non-atpase-like protein 8 protein.
          Length = 362

 Score = 40.7 bits (91), Expect = 9e-04
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
 Frame = +1

Query: 22  VKVHPVVLFQIVDAYER--RNADSHRVIGTLLGTSDKG-VVEVTNCFCVPHKEHADQVEA 192
           V VHP+VL  +VD + R  +     RV+G LLG+  K   +++ N F VP  E       
Sbjct: 41  VTVHPLVLLSVVDHFNRVSKTQSVKRVVGVLLGSMKKDKTLDIGNSFAVPFDEDDKDKST 100

Query: 193 ---ELNYAMDVYELNRRVNSSESML 258
              +++Y   +Y +  +V + E ++
Sbjct: 101 WFLDMDYLESMYGMFYKVAAKEKIV 125


>Z68760-4|CAE17822.1|  160|Caenorhabditis elegans Hypothetical
           protein F36H1.9 protein.
          Length = 160

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 146 TASACHTKNMPIKSKRNLITRWMFTS 223
           T  ACHT  M +  K+N IT W +++
Sbjct: 55  TLVACHTLQMFLAEKKNTITHWKYST 80


>Z81493-1|CAB04039.1|  178|Caenorhabditis elegans Hypothetical
           protein F01D5.1 protein.
          Length = 178

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 133 PLLCRSCPIRCR*LCENLHFDVRMRPQFEIKQQD 32
           PLL  SCP+ C+ LC        + P F+ K  D
Sbjct: 44  PLLKESCPVTCK-LCPPTEAPTTLAPCFDDKDTD 76


>AL132951-5|CAC44307.1|  426|Caenorhabditis elegans Hypothetical
           protein Y67H2A.6 protein.
          Length = 426

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
 Frame = +1

Query: 22  VKVHPVVLFQIVDAYERRNADS----HRVIGTLLGTSDKGVVEVTNCF 153
           V +HP+V+ Q+ + Y R          +V G +LG  +   VE  N F
Sbjct: 14  VLLHPLVIMQMSEHYSRTKVQQGPTVKKVFGAILGRQNGRQVEAINSF 61


>Z70286-2|CAA94290.1|  529|Caenorhabditis elegans Hypothetical
           protein K08C7.5 protein.
          Length = 529

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 187 RLDRHVLCVARRSSWLLPPLLCRSCP 110
           R+ + V  V RR +WL+P L  R  P
Sbjct: 205 RIAKQVYLVTRRGTWLIPKLETRGLP 230


>AJ582071-1|CAE46541.1|  529|Caenorhabditis elegans flavin
           monooxygenase protein.
          Length = 529

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 187 RLDRHVLCVARRSSWLLPPLLCRSCP 110
           R+ + V  V RR +WL+P L  R  P
Sbjct: 205 RIAKQVYLVTRRGTWLIPKLETRGLP 230


>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
            (myotubularin) family protein 5 protein.
          Length = 1744

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 395  CLCTIGSAKWKARLHVHSCRCHSH 466
            C CT    +W   +H   CR H H
Sbjct: 1556 CYCTNILTRWSKAVHCKKCRIHVH 1579


>AF067617-4|AAC17557.1|  381|Caenorhabditis elegans Hypothetical
           protein T04D1.2 protein.
          Length = 381

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 41  FYFKLWTHTNVEMQILTELSAPYWARA 121
           FY  +W+ T V  + LT     YW R+
Sbjct: 118 FYDMMWSQTTVSYRFLTTPPVTYWIRS 144


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,517,514
Number of Sequences: 27780
Number of extensions: 332616
Number of successful extensions: 868
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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