SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a05r
         (803 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81584-5|CAB04675.1|  376|Caenorhabditis elegans Hypothetical pr...   357   4e-99
X16799-1|CAA34720.1|  376|Caenorhabditis elegans actin protein.       357   4e-99
X16797-1|CAA34718.1|  376|Caenorhabditis elegans actin protein.       357   4e-99
U64601-7|AAK77622.1|  332|Caenorhabditis elegans Actin protein 4...   357   4e-99
U64601-6|AAT92068.1|  362|Caenorhabditis elegans Actin protein 4...   357   4e-99
U64601-5|AAB04575.1|  376|Caenorhabditis elegans Actin protein 4...   357   4e-99
Z81584-6|CAB04678.1|  376|Caenorhabditis elegans Hypothetical pr...   357   7e-99
Z81584-4|CAB04676.1|  376|Caenorhabditis elegans Hypothetical pr...   357   7e-99
X16796-1|CAA34717.1|  376|Caenorhabditis elegans actin protein.       357   7e-99
X16798-1|CAA34719.1|  375|Caenorhabditis elegans actin protein.       351   5e-97
Z83241-1|CAB05817.1|  375|Caenorhabditis elegans Hypothetical pr...   337   5e-93
AL132949-19|CAB70110.2|  374|Caenorhabditis elegans Hypothetical...   172   3e-43
Z71181-1|CAA94894.1|  395|Caenorhabditis elegans Hypothetical pr...   161   5e-40
AC006833-3|AAF60947.2|  436|Caenorhabditis elegans Hypothetical ...   120   9e-28
U40799-8|AAA81487.1|  552|Caenorhabditis elegans Hypothetical pr...   105   3e-23
AC024200-9|AAF36012.1|  425|Caenorhabditis elegans Arp2/3 comple...   100   2e-21
Z46676-5|CAA86667.3|  418|Caenorhabditis elegans Hypothetical pr...    81   9e-16
U24189-2|AAC47513.1|  418|Caenorhabditis elegans actin-related p...    81   9e-16
U42436-1|AAF99891.1|  305|Caenorhabditis elegans Hypothetical pr...    48   1e-05
U40426-4|AAP40527.1|  144|Caenorhabditis elegans Diacylglycerol ...    31   0.73 
U40426-3|AAP40528.1|  351|Caenorhabditis elegans Diacylglycerol ...    31   0.73 
U40426-2|AAP40526.1|  536|Caenorhabditis elegans Diacylglycerol ...    31   0.73 
AF026202-2|AAB71242.2|  501|Caenorhabditis elegans Hypothetical ...    29   2.9  
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ...    29   5.1  
AF039044-7|AAG24125.1|  125|Caenorhabditis elegans Hypothetical ...    29   5.1  
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr...    28   9.0  
U28741-1|AAA68325.2|  256|Caenorhabditis elegans Hypothetical pr...    28   9.0  
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re...    28   9.0  
AL032654-9|CAA21720.1|  404|Caenorhabditis elegans Hypothetical ...    28   9.0  

>Z81584-5|CAB04675.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.5 protein.
          Length = 376

 Score =  357 bits (879), Expect = 4e-99
 Identities = 168/173 (97%), Positives = 172/173 (99%)
 Frame = -2

Query: 802 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 623
           TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALF
Sbjct: 204 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALF 263

Query: 622 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 443
           QPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP
Sbjct: 264 QPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 323

Query: 442 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
           STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 324 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>X16799-1|CAA34720.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  357 bits (879), Expect = 4e-99
 Identities = 168/173 (97%), Positives = 172/173 (99%)
 Frame = -2

Query: 802 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 623
           TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALF
Sbjct: 204 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALF 263

Query: 622 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 443
           QPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP
Sbjct: 264 QPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 323

Query: 442 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
           STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 324 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>X16797-1|CAA34718.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  357 bits (879), Expect = 4e-99
 Identities = 168/173 (97%), Positives = 172/173 (99%)
 Frame = -2

Query: 802 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 623
           TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALF
Sbjct: 204 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALF 263

Query: 622 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 443
           QPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP
Sbjct: 264 QPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 323

Query: 442 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
           STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 324 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>U64601-7|AAK77622.1|  332|Caenorhabditis elegans Actin protein 4,
           isoform b protein.
          Length = 332

 Score =  357 bits (879), Expect = 4e-99
 Identities = 168/173 (97%), Positives = 172/173 (99%)
 Frame = -2

Query: 802 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 623
           TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALF
Sbjct: 160 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALF 219

Query: 622 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 443
           QPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP
Sbjct: 220 QPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 279

Query: 442 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
           STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 280 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332


>U64601-6|AAT92068.1|  362|Caenorhabditis elegans Actin protein 4,
           isoform c protein.
          Length = 362

 Score =  357 bits (879), Expect = 4e-99
 Identities = 168/173 (97%), Positives = 172/173 (99%)
 Frame = -2

Query: 802 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 623
           TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALF
Sbjct: 190 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALF 249

Query: 622 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 443
           QPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP
Sbjct: 250 QPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 309

Query: 442 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
           STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 310 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362


>U64601-5|AAB04575.1|  376|Caenorhabditis elegans Actin protein 4,
           isoform a protein.
          Length = 376

 Score =  357 bits (879), Expect = 4e-99
 Identities = 168/173 (97%), Positives = 172/173 (99%)
 Frame = -2

Query: 802 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 623
           TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALF
Sbjct: 204 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALF 263

Query: 622 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 443
           QPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP
Sbjct: 264 QPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 323

Query: 442 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
           STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 324 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>Z81584-6|CAB04678.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.6 protein.
          Length = 376

 Score =  357 bits (877), Expect = 7e-99
 Identities = 167/173 (96%), Positives = 172/173 (99%)
 Frame = -2

Query: 802 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 623
           TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+F
Sbjct: 204 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMF 263

Query: 622 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 443
           QPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP
Sbjct: 264 QPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 323

Query: 442 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
           STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 324 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>Z81584-4|CAB04676.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.4 protein.
          Length = 376

 Score =  357 bits (877), Expect = 7e-99
 Identities = 167/173 (96%), Positives = 172/173 (99%)
 Frame = -2

Query: 802 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 623
           TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+F
Sbjct: 204 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMF 263

Query: 622 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 443
           QPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP
Sbjct: 264 QPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 323

Query: 442 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
           STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 324 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>X16796-1|CAA34717.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  357 bits (877), Expect = 7e-99
 Identities = 167/173 (96%), Positives = 172/173 (99%)
 Frame = -2

Query: 802 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 623
           TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+F
Sbjct: 204 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMF 263

Query: 622 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 443
           QPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP
Sbjct: 264 QPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 323

Query: 442 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
           STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 324 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>X16798-1|CAA34719.1|  375|Caenorhabditis elegans actin protein.
          Length = 375

 Score =  351 bits (862), Expect = 5e-97
 Identities = 166/173 (95%), Positives = 171/173 (98%)
 Frame = -2

Query: 802 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 623
           TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+F
Sbjct: 204 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMF 263

Query: 622 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 443
           QPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP
Sbjct: 264 QPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 323

Query: 442 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
            TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 324 -TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375


>Z83241-1|CAB05817.1|  375|Caenorhabditis elegans Hypothetical
           protein T25C8.2 protein.
          Length = 375

 Score =  337 bits (829), Expect = 5e-93
 Identities = 159/173 (91%), Positives = 164/173 (94%)
 Frame = -2

Query: 802 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 623
           TAEREIVRDIKEKLCYVA DFE E+A AASSSSLEKSYELPDGQVITIGNERFRCPE LF
Sbjct: 203 TAEREIVRDIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLF 262

Query: 622 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 443
           QP+F+GME  GIHETTY SIMKCDVDIRKDLYANTVLSGGT+M+PGIADRMQKEI  LAP
Sbjct: 263 QPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAP 322

Query: 442 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
           STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375


>AL132949-19|CAB70110.2|  374|Caenorhabditis elegans Hypothetical
           protein Y53F4B.22 protein.
          Length = 374

 Score =  172 bits (418), Expect = 3e-43
 Identities = 83/171 (48%), Positives = 113/171 (66%)
 Frame = -2

Query: 796 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQP 617
           E EIVR++KE  CY+ALD      T   ++S++ SY LPD   I I N  FR PE LF+P
Sbjct: 209 EFEIVREMKENACYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKP 263

Query: 616 SFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPST 437
             +G E  G+      SIMKCDVD+R+ LY+N VLSGGTT++ G  DR+  E+  +AP+ 
Sbjct: 264 DLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPAD 323

Query: 436 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
            KI+I A  ER    WIGGSI+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 324 GKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374


>Z71181-1|CAA94894.1|  395|Caenorhabditis elegans Hypothetical
           protein K07C5.1 protein.
          Length = 395

 Score =  161 bits (391), Expect = 5e-40
 Identities = 81/177 (45%), Positives = 110/177 (62%), Gaps = 13/177 (7%)
 Frame = -2

Query: 802 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 623
           +A+ E VR +KEKLCY+A D EQE   A  ++ L + Y LPDG+VI +G ERF  PE LF
Sbjct: 207 SADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILF 266

Query: 622 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-- 449
           QP  + +E  G+ E  +  I   D+D R D Y + VLSGGTTMYPG+  R++KE+  L  
Sbjct: 267 QPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYL 326

Query: 448 ---------APSTMKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQEYDESG 311
                    A    KI+I APP RK+ V++GG++LA+L     Q  W+SK+EY+E G
Sbjct: 327 DRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383


>AC006833-3|AAF60947.2|  436|Caenorhabditis elegans Hypothetical
           protein ZK616.4 protein.
          Length = 436

 Score =  120 bits (290), Expect = 9e-28
 Identities = 60/143 (41%), Positives = 81/143 (56%), Gaps = 8/143 (5%)
 Frame = -2

Query: 691 YELPDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLY 527
           Y  P+G     G ER + PE LF   +L  E        + +    S    D+DIR  L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352

Query: 526 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLST 356
           +N  ++GG ++  G  +R+   +    P T+K+++ A P   ERKY  WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412

Query: 355 FQQMWISKQEYDESGPSIVHRKC 287
           FQQMW+SK EYDESG SIV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435


>U40799-8|AAA81487.1|  552|Caenorhabditis elegans Hypothetical
           protein F42C5.9 protein.
          Length = 552

 Score =  105 bits (253), Expect = 3e-23
 Identities = 53/160 (33%), Positives = 94/160 (58%), Gaps = 3/160 (1%)
 Frame = -2

Query: 796 EREIVRDIKEKLCYVALDFEQEMATAASSS--SLEKSYELPDGQV-ITIGNERFRCPEAL 626
           E+ I+R   E+  YV  D+++E  +    +  SL+     P  Q    I N RF C E L
Sbjct: 380 EKLILRFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGL 439

Query: 625 FQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 446
           F+P   G++  G+H+  + +I++C +D R+ LY N  L+GG ++ PGIA+++++E++ + 
Sbjct: 440 FKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVV 499

Query: 445 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 326
           P+T+  ++   P R  + ++G  I+AS STF+   IS Q+
Sbjct: 500 PNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539


>AC024200-9|AAF36012.1|  425|Caenorhabditis elegans Arp2/3 complex
           component protein 1 protein.
          Length = 425

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 62/186 (33%), Positives = 97/186 (52%), Gaps = 23/186 (12%)
 Frame = -2

Query: 790 EIVRDIKEKLCYVALDFEQEMATA-ASSSSLEKSYELPDGQV-----ITIGNERFRCPEA 629
           E+ + IKEK CYV  D  +E       ++   ++Y+  +        + +G ERF  PE 
Sbjct: 229 EVAKMIKEKFCYVCPDVMKEFVKYDTDAAKWLRTYDGINSITKKPFNVDVGYERFLGPEI 288

Query: 628 LFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITA 452
            F P F   E    I +T    I +C +D+R+ LY N VLSGG+TM+   A ++Q+++  
Sbjct: 289 FFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKR 348

Query: 451 LA----------------PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYD 320
           L+                P  + +++I+   ++Y+VW GGS+LAS S F Q+  +K EY 
Sbjct: 349 LSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYM 408

Query: 319 ESGPSI 302
           E GPSI
Sbjct: 409 ERGPSI 414


>Z46676-5|CAA86667.3|  418|Caenorhabditis elegans Hypothetical
           protein C08B11.6 protein.
          Length = 418

 Score = 81.0 bits (191), Expect = 9e-16
 Identities = 55/198 (27%), Positives = 99/198 (50%), Gaps = 25/198 (12%)
 Frame = -2

Query: 796 EREIVRDIKEKLCYVALDFEQEMATAAS---SSSLEKSYELPD------GQV-------- 668
           E  ++ + KE LC+V+ +F++ M  A +    ++  K Y +PD      G V        
Sbjct: 198 ETYVINECKEDLCFVSQNFDESMKEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHD 257

Query: 667 -----ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 503
                I +G ERF  PE LF PS + ++ CG+ E    SI +C   +R  L  N ++ GG
Sbjct: 258 PQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGG 317

Query: 502 TTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISK 332
           ++ +PG  +R+++E+ ++ P+   + +   +  P+     W  G  L  L+  +  WI++
Sbjct: 318 SSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINR 373

Query: 331 QEYDESGPSIVHRKCF*T 278
           +++DE G S+     F T
Sbjct: 374 KDWDERGDSLEFSNFFQT 391


>U24189-2|AAC47513.1|  418|Caenorhabditis elegans actin-related
           protein-like protein.
          Length = 418

 Score = 81.0 bits (191), Expect = 9e-16
 Identities = 55/198 (27%), Positives = 99/198 (50%), Gaps = 25/198 (12%)
 Frame = -2

Query: 796 EREIVRDIKEKLCYVALDFEQEMATAAS---SSSLEKSYELPD------GQV-------- 668
           E  ++ + KE LC+V+ +F++ M  A +    ++  K Y +PD      G V        
Sbjct: 198 ETYVINECKEDLCFVSQNFDESMKEARNRFQGNTTMKRYIMPDFHSTFRGVVKDVKEPHD 257

Query: 667 -----ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 503
                I +G ERF  PE LF PS + ++ CG+ E    SI +C   +R  L  N ++ GG
Sbjct: 258 PQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGG 317

Query: 502 TTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISK 332
           ++ +PG  +R+++E+ ++ P+   + +   +  P+     W  G  L  L+  +  WI++
Sbjct: 318 SSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINR 373

Query: 331 QEYDESGPSIVHRKCF*T 278
           +++DE G S+     F T
Sbjct: 374 KDWDERGDSLEFSNFFQT 391


>U42436-1|AAF99891.1|  305|Caenorhabditis elegans Hypothetical
           protein C49H3.8 protein.
          Length = 305

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
 Frame = -2

Query: 565 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 401
           + KC +D+RK L+ N +L+GG +  PG+  R+++EI  +   +  KI +I       E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257

Query: 400 ----YSVWIGGSILASL-STFQQMWISKQEY 323
               +  W+G S+L SL  T ++  ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288


>U40426-4|AAP40527.1|  144|Caenorhabditis elegans Diacylglycerol
           kinase protein 2,isoform b protein.
          Length = 144

 Score = 31.5 bits (68), Expect = 0.73
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 389 PYGVLPLWRSNDLNLHCRWGESCD 460
           P  VLPL   NDL+   +WG+ CD
Sbjct: 97  PVAVLPLGTGNDLSRLLKWGKKCD 120


>U40426-3|AAP40528.1|  351|Caenorhabditis elegans Diacylglycerol
           kinase protein 2,isoform c protein.
          Length = 351

 Score = 31.5 bits (68), Expect = 0.73
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 389 PYGVLPLWRSNDLNLHCRWGESCD 460
           P  VLPL   NDL+   +WG+ CD
Sbjct: 97  PVAVLPLGTGNDLSRLLKWGKKCD 120


>U40426-2|AAP40526.1|  536|Caenorhabditis elegans Diacylglycerol
           kinase protein 2,isoform a protein.
          Length = 536

 Score = 31.5 bits (68), Expect = 0.73
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 389 PYGVLPLWRSNDLNLHCRWGESCD 460
           P  VLPL   NDL+   +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305


>AF026202-2|AAB71242.2|  501|Caenorhabditis elegans Hypothetical
           protein C10E2.2 protein.
          Length = 501

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -3

Query: 735 RRWPPLHPAAPSRSLTNFPTVRSSPSE 655
           R+  PLHPA P   L N P   SSP+E
Sbjct: 144 RQRDPLHPAHPLLPLRNMPYDSSSPTE 170


>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
           protein Y53C10A.9 protein.
          Length = 1564

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 23/81 (28%), Positives = 37/81 (45%)
 Frame = +2

Query: 536 LTDVHVALHDGVICGLVDAASFHTQERGLEESLWATESFVSDGDDLTVGKFVRLLEGAAG 715
           +T +H A    V+ G +DA +   + R   E +     +    D+LTV + +RL+    G
Sbjct: 497 ITGMHQATEGKVMIGGIDANANRAEAR---ELIGYCPQYNPIYDELTVWEHLRLVNALKG 553

Query: 716 CSGGHLLLEVKSDVAQLLLDV 778
            SGG    + K D   LL  +
Sbjct: 554 RSGGS---DFKMDAESLLKQI 571


>AF039044-7|AAG24125.1|  125|Caenorhabditis elegans Hypothetical
           protein F48G7.9 protein.
          Length = 125

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 777 TSRRSCATSLLTSSRRWPPLHPAAPS 700
           +SRRS   S+ TS++ WP    +APS
Sbjct: 80  SSRRSSLASVSTSTKNWPSKSSSAPS 105


>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
            F29D11.1 protein.
          Length = 4753

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 225  KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 317
            +P  + R  A GG DA+C+ K + C  E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653


>U28741-1|AAA68325.2|  256|Caenorhabditis elegans Hypothetical
           protein F35D2.3 protein.
          Length = 256

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -2

Query: 328 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 227
           +Y ++G SIV+ KC  T R   P   R R LN G
Sbjct: 30  DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63


>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
            protein protein.
          Length = 4753

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 225  KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 317
            +P  + R  A GG DA+C+ K + C  E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653


>AL032654-9|CAA21720.1|  404|Caenorhabditis elegans Hypothetical
           protein Y52B11A.9 protein.
          Length = 404

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = -2

Query: 409 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 248
           +RK  V   G   A +S F    + K++ DE GPS   RK       S  PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,282,379
Number of Sequences: 27780
Number of extensions: 394962
Number of successful extensions: 1325
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1315
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -