Silkworm BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0023
         (542 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-38|CAE45095.2|  845|Caenorhabditis elegans Hypothetical p...    31   0.71 
Z99281-37|CAJ44244.1|  740|Caenorhabditis elegans Hypothetical p...    31   0.71 
Z99281-36|CAB16527.3|  862|Caenorhabditis elegans Hypothetical p...    31   0.71 
Z99281-34|CAJ44243.1|  917|Caenorhabditis elegans Hypothetical p...    31   0.71 
AY611485-1|AAT37524.1|  740|Caenorhabditis elegans epidermal gro...    31   0.71 
AY611484-1|AAT37523.1|  917|Caenorhabditis elegans epidermal gro...    31   0.71 

>Z99281-38|CAE45095.2|  845|Caenorhabditis elegans Hypothetical
           protein Y57G11C.24d protein.
          Length = 845

 Score = 30.7 bits (66), Expect = 0.71
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +3

Query: 339 SVDSAIERATAAYKIVEHLAQ---GEQQEVSASGESLSASKDMVETARVWARPV 491
           SVD  ++  T +Y  VEHLA    G Q  ++   + +   K M + + +WA+P+
Sbjct: 19  SVDQRVDDVTPSY-YVEHLATFAVGRQFGLTFPADGIRKLKQMEKNSAIWAQPL 71


>Z99281-37|CAJ44244.1|  740|Caenorhabditis elegans Hypothetical
           protein Y57G11C.24h protein.
          Length = 740

 Score = 30.7 bits (66), Expect = 0.71
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +3

Query: 339 SVDSAIERATAAYKIVEHLAQ---GEQQEVSASGESLSASKDMVETARVWARPV 491
           SVD  ++  T +Y  VEHLA    G Q  ++   + +   K M + + +WA+P+
Sbjct: 91  SVDQRVDDVTPSY-YVEHLATFAVGRQFGLTFPADGIRKLKQMEKNSAIWAQPL 143


>Z99281-36|CAB16527.3|  862|Caenorhabditis elegans Hypothetical
           protein Y57G11C.24a protein.
          Length = 862

 Score = 30.7 bits (66), Expect = 0.71
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +3

Query: 339 SVDSAIERATAAYKIVEHLAQ---GEQQEVSASGESLSASKDMVETARVWARPV 491
           SVD  ++  T +Y  VEHLA    G Q  ++   + +   K M + + +WA+P+
Sbjct: 36  SVDQRVDDVTPSY-YVEHLATFAVGRQFGLTFPADGIRKLKQMEKNSAIWAQPL 88


>Z99281-34|CAJ44243.1|  917|Caenorhabditis elegans Hypothetical
           protein Y57G11C.24g protein.
          Length = 917

 Score = 30.7 bits (66), Expect = 0.71
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +3

Query: 339 SVDSAIERATAAYKIVEHLAQ---GEQQEVSASGESLSASKDMVETARVWARPV 491
           SVD  ++  T +Y  VEHLA    G Q  ++   + +   K M + + +WA+P+
Sbjct: 91  SVDQRVDDVTPSY-YVEHLATFAVGRQFGLTFPADGIRKLKQMEKNSAIWAQPL 143


>AY611485-1|AAT37524.1|  740|Caenorhabditis elegans epidermal growth
           factor receptorpathway substrate 8 splice variant B
           protein.
          Length = 740

 Score = 30.7 bits (66), Expect = 0.71
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +3

Query: 339 SVDSAIERATAAYKIVEHLAQ---GEQQEVSASGESLSASKDMVETARVWARPV 491
           SVD  ++  T +Y  VEHLA    G Q  ++   + +   K M + + +WA+P+
Sbjct: 91  SVDQRVDDVTPSY-YVEHLATFAVGRQFGLTFPADGIRKLKQMEKNSAIWAQPL 143


>AY611484-1|AAT37523.1|  917|Caenorhabditis elegans epidermal growth
           factor receptorpathway substrate 8 splice variant A
           protein.
          Length = 917

 Score = 30.7 bits (66), Expect = 0.71
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +3

Query: 339 SVDSAIERATAAYKIVEHLAQ---GEQQEVSASGESLSASKDMVETARVWARPV 491
           SVD  ++  T +Y  VEHLA    G Q  ++   + +   K M + + +WA+P+
Sbjct: 91  SVDQRVDDVTPSY-YVEHLATFAVGRQFGLTFPADGIRKLKQMEKNSAIWAQPL 143


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,665,444
Number of Sequences: 27780
Number of extensions: 223027
Number of successful extensions: 539
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)