Silkworm BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0008
         (852 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U46675-3|AAB52643.1|  375|Caenorhabditis elegans Activated in bl...    34   0.15 
Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical pr...    30   0.35 
Z83129-7|CAB05644.1|  256|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AL021508-1|CAA16431.1|  170|Caenorhabditis elegans Hypothetical ...    29   3.2  
AF300704-1|AAG24400.1|  622|Caenorhabditis elegans incenp-like p...    29   4.2  
AC025716-5|AAK39616.1|  622|Caenorhabditis elegans Incenp homolo...    29   4.2  
Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z82286-4|CAB05310.1|  468|Caenorhabditis elegans Hypothetical pr...    28   9.7  

>U46675-3|AAB52643.1|  375|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 10 protein.
          Length = 375

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -2

Query: 692 SVSC*PSDVPLALVRVFQSQTGHICIPRCRPFCRSSRNCSY 570
           S  C     P   V+V Q+Q  + C+P C+P C+SS   SY
Sbjct: 286 SCDCAQQAQPTFQVQVQQAQPINQCVPACQPACQSSCTASY 326


>Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical
           protein M02G9.1 protein.
          Length = 909

 Score = 29.9 bits (64), Expect(2) = 0.35
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = -2

Query: 785 RAVGTEP*VPTILPSWTXGGVWAPTTXRKELSVSC*PSDVPLALVRVFQSQTGHICIPRC 606
           RA+ T   +P  LPS T       T      +++  P+  P+  +++ Q Q    C+P C
Sbjct: 322 RALCTPTCMPQCLPSCTATTTTTTTQTPYIQTLAPAPAPAPVQ-IQIIQKQCVPSCMPAC 380

Query: 605 RPFC 594
           +P C
Sbjct: 381 QPSC 384



 Score = 21.4 bits (43), Expect(2) = 0.35
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 620 CIPRCRPFCRSS 585
           CIP C+P C  S
Sbjct: 402 CIPPCQPQCLQS 413


>Z83129-7|CAB05644.1|  256|Caenorhabditis elegans Hypothetical
           protein W06G6.12 protein.
          Length = 256

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +2

Query: 293 YFDACAYWLPSKRANQHSEQCRSGCRCRGVGEVSGVIFT 409
           +++ CAYW+  + ++Q    C   C CR    V+  + T
Sbjct: 119 HWECCAYWVSKRMSSQEHHTC-PNCNCRVKAHVAFSLVT 156


>AL021508-1|CAA16431.1|  170|Caenorhabditis elegans Hypothetical
           protein Y70C5B.1 protein.
          Length = 170

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +2

Query: 293 YFDACAYWLPSKRANQHSEQCRSGCRCRGVGEVSGVIFT 409
           +++ CAYW+  + ++Q    C   C CR    V+  + T
Sbjct: 33  HWECCAYWVSKRMSSQEHHTC-PNCNCRVKAHVAFSLVT 70


>AF300704-1|AAG24400.1|  622|Caenorhabditis elegans incenp-like
           protein ICP-1 protein.
          Length = 622

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = +3

Query: 660 QGHVGRLARNRKLFPXCRXCPDTAXGPRRKDGWYSRLGSDGSXKKVPL 803
           Q H    A +RK+FP          GP +K      +GSDG  K  P+
Sbjct: 299 QDHAPNKAASRKIFPTAESTSTPGRGPAKKGKVEILIGSDGQ-KTAPV 345


>AC025716-5|AAK39616.1|  622|Caenorhabditis elegans Incenp homolog
           protein 1 protein.
          Length = 622

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = +3

Query: 660 QGHVGRLARNRKLFPXCRXCPDTAXGPRRKDGWYSRLGSDGSXKKVPL 803
           Q H    A +RK+FP          GP +K      +GSDG  K  P+
Sbjct: 299 QDHAPNKAASRKIFPTAESTSTPGRGPAKKGKVEILIGSDGQ-KTAPV 345


>Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical
           protein F07H5.8 protein.
          Length = 872

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
 Frame = -2

Query: 758 PTILPSWTXGGVWAPTTXRKELSVSC*PSDVPLALVRVFQS-QTGHICIPRCRPFCR 591
           PT  P        +  T  +  + SC P+  P    +  Q+  T   CIP C+P C+
Sbjct: 273 PTCSPQCIQSVTVSIQTTAQPTTASCIPACQPACTPQCVQAVTTTETCIPACQPACQ 329


>Z82286-4|CAB05310.1|  468|Caenorhabditis elegans Hypothetical
           protein W02A2.7 protein.
          Length = 468

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +2

Query: 503 RCFYIRDEKQIDVETGWANATPNTNSSSRICR---KGGTGGCRYGL 631
           RC +    K++      A   PN    +++C+   +GGTG C YGL
Sbjct: 291 RCKFAHGLKELRATDAPARY-PNNKYKTKLCKNFARGGTGFCPYGL 335


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,424,377
Number of Sequences: 27780
Number of extensions: 380671
Number of successful extensions: 1050
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)