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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20012
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical pr...   168   3e-42
Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical pr...   167   5e-42
Z81050-9|CAB02858.2|  400|Caenorhabditis elegans Hypothetical pr...    32   0.31 
Z19153-1|CAA79546.1|  374|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z71266-7|CAA95845.1|  987|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical
           protein C34F6.8 protein.
          Length = 435

 Score =  168 bits (409), Expect = 3e-42
 Identities = 75/106 (70%), Positives = 88/106 (83%)
 Frame = +2

Query: 257 DMVAQAIKGSGGFVWACKNYDGDVQSDIVAQGYGSLGMMTSVLMCPDGRTVESESAHGTV 436
           D VAQA+K SGGFVWACKNYDGDVQSDIVAQGYGSLG+M+SVLMCPDG+T+E+E+AHGTV
Sbjct: 275 DQVAQALKSSGGFVWACKNYDGDVQSDIVAQGYGSLGLMSSVLMCPDGKTIEAEAAHGTV 334

Query: 437 TRHYRMHQQGKPTSTNPVASIYAWQEVLHTGPN*DGTPELERFALS 574
           TRHYR HQ+G  TSTNP+ASI+AW   LH     D    L+ F+L+
Sbjct: 335 TRHYREHQKGNSTSTNPIASIFAWTRGLHHRGVLDNNEALKTFSLT 380



 Score =  129 bits (312), Expect = 1e-30
 Identities = 56/83 (67%), Positives = 68/83 (81%), Gaps = 1/83 (1%)
 Frame = +3

Query: 9   LYDFK-TPGVAMGMYNTDESIRSFAHSSFQVALQKKWPLYLSTKNTILKRYDGRFKDIFE 185
           +YDFK + GV + MYNTDESI+ FAHS FQ AL K+WPLYLSTKNTILK+YDGRFKDIF+
Sbjct: 191 VYDFKKSGGVGLAMYNTDESIKGFAHSCFQYALMKQWPLYLSTKNTILKKYDGRFKDIFQ 250

Query: 186 EVFQSDYKTKFDEAKIWYEHRLI 254
           ++++  Y+  F   KIWYEHRLI
Sbjct: 251 DIYEKKYEADFKNNKIWYEHRLI 273



 Score = 39.5 bits (88), Expect = 0.002
 Identities = 19/46 (41%), Positives = 27/46 (58%)
 Frame = +1

Query: 511 RGLAHRAKLGRDSRIGALRS*PSKRRXVECIDSGKMTKDLVICIHG 648
           RGL HR  L  +  +    S   ++  ++ ++ GKMTKDL ICIHG
Sbjct: 360 RGLHHRGVLDNNEALKTF-SLTLEKACIDTVEEGKMTKDLSICIHG 404


>Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical
           protein F59B8.2 protein.
          Length = 412

 Score =  167 bits (407), Expect = 5e-42
 Identities = 76/104 (73%), Positives = 86/104 (82%)
 Frame = +2

Query: 257 DMVAQAIKGSGGFVWACKNYDGDVQSDIVAQGYGSLGMMTSVLMCPDGRTVESESAHGTV 436
           DMVAQA+K  GGFVWACKNYDGDVQSD VAQGYGSLG+MTSVL+CPDG+TVE+E+AHGTV
Sbjct: 252 DMVAQAMKSDGGFVWACKNYDGDVQSDSVAQGYGSLGLMTSVLVCPDGKTVEAEAAHGTV 311

Query: 437 TRHYRMHQQGKPTSTNPVASIYAWQEVLHTGPN*DGTPELERFA 568
           TRHYRMHQ+G+ TSTNP+ASI+AW   L      D    LE FA
Sbjct: 312 TRHYRMHQKGQETSTNPIASIFAWSRGLAHRATLDKNSALETFA 355



 Score =  128 bits (309), Expect = 3e-30
 Identities = 56/82 (68%), Positives = 71/82 (86%)
 Frame = +3

Query: 9   LYDFKTPGVAMGMYNTDESIRSFAHSSFQVALQKKWPLYLSTKNTILKRYDGRFKDIFEE 188
           ++DFK PGV++ MYNTD+SIR FAH+SF+ ALQ+K+PLYLSTKNTILK+YDGRFKDIF E
Sbjct: 170 VFDFKGPGVSLSMYNTDDSIRDFAHASFKYALQRKFPLYLSTKNTILKKYDGRFKDIFAE 229

Query: 189 VFQSDYKTKFDEAKIWYEHRLI 254
           ++  +Y+ +F  A IWYEHRLI
Sbjct: 230 IY-PEYEAEFKAAGIWYEHRLI 250



 Score = 37.5 bits (83), Expect = 0.008
 Identities = 18/47 (38%), Positives = 30/47 (63%)
 Frame = +1

Query: 508 ARGLAHRAKLGRDSRIGALRS*PSKRRXVECIDSGKMTKDLVICIHG 648
           +RGLAHRA L ++S +    +   +   +E +++G +TKDL IC+ G
Sbjct: 336 SRGLAHRATLDKNSALETFAN-NLEAVCIETMEAGFLTKDLAICVKG 381


>Z81050-9|CAB02858.2|  400|Caenorhabditis elegans Hypothetical
           protein C50B6.11 protein.
          Length = 400

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = +3

Query: 54  TDESIRSFAH---SSFQVALQKKWPLYLSTKNTILKRYDGRFKDIFEEVFQSDYKTKFDE 224
           TD S+R F H       + L ++    L T NT     + +F +I+E  FQ+ + T FD 
Sbjct: 127 TDPSLR-FPHLGACKANLTLDQQTLTKLWTPNTCF--VNSKFAEIYESSFQNVFLTLFDN 183

Query: 225 AKIWYEHRL 251
             +W  +R+
Sbjct: 184 GTVWVNYRV 192


>Z19153-1|CAA79546.1|  374|Caenorhabditis elegans Hypothetical
           protein C38C10.1 protein.
          Length = 374

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 16/56 (28%), Positives = 23/56 (41%)
 Frame = +3

Query: 177 IFEEVFQSDYKTKFDEAKIWYEHRLITTWWHRLLRDQVALFGPAKTTTEMCSPILL 344
           +F   F       F+    W  + L   WW+  L    + FG A TT  +CS + L
Sbjct: 50  LFNMAFADLLIALFNVGTSW-TYNLYYDWWYGDLCTLTSFFGIAPTTVSVCSMMAL 104


>Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical
           protein T04F3.2 protein.
          Length = 260

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/55 (25%), Positives = 19/55 (34%)
 Frame = -2

Query: 615 FTAIDALDXTPLRGLRAKRSNSGVPS*FGPVCKTSCQA*IEATGLVDVGLPCWCI 451
           F  +  LD    R    KR   G    + P C        +     DV + CWC+
Sbjct: 45  FEEVIRLDCASQRRKALKRKTDGDARIYIPTCSPKNSLLYDKVQCYDVSIYCWCV 99


>Z71266-7|CAA95845.1|  987|Caenorhabditis elegans Hypothetical
           protein R06C7.8 protein.
          Length = 987

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +3

Query: 165 RFKDIFEEVFQSDYKTKFDEAKIWYEHRLITTWWHRLLRDQV 290
           ++KD F E    DY+ + D   ++ +H++I T   R  R++V
Sbjct: 228 KWKDTFGEDVDDDYRKRKDSGVVFVKHQVIDT--DRQAREEV 267


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,314,654
Number of Sequences: 27780
Number of extensions: 362212
Number of successful extensions: 873
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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