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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0063
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81057-6|CAB02913.1|  221|Caenorhabditis elegans Hypothetical pr...   260   5e-70
D85499-1|BAA12821.1|  221|Caenorhabditis elegans manganese super...   260   5e-70
D12984-1|BAA02363.1|  221|Caenorhabditis elegans manganese super...   260   5e-70
X85790-1|CAA59790.1|  218|Caenorhabditis elegans mangenese super...   247   6e-66
X77021-1|CAA54319.1|  218|Caenorhabditis elegans manganese super...   247   6e-66
U42844-5|AAB53822.1|  218|Caenorhabditis elegans Sod (superoxide...   247   6e-66
Z81545-2|CAB04438.1|  212|Caenorhabditis elegans Hypothetical pr...    33   0.13 
Z82288-5|CAB05324.1|  380|Caenorhabditis elegans Hypothetical pr...    31   0.93 
Z46343-8|CAA86461.1|  549|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z35598-9|CAA84658.1|  549|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like...    29   2.1  
AC006603-7|ABB51201.1|  576|Caenorhabditis elegans Hypothetical ...    28   5.0  
AF106573-10|AAC78155.2|  862|Caenorhabditis elegans Gex interact...    28   6.6  
Z74045-4|CAA98554.2|  924|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z74032-11|CAA98469.2|  924|Caenorhabditis elegans Hypothetical p...    27   8.7  

>Z81057-6|CAB02913.1|  221|Caenorhabditis elegans Hypothetical
           protein F10D11.1 protein.
          Length = 221

 Score =  260 bits (638), Expect = 5e-70
 Identities = 121/187 (64%), Positives = 146/187 (78%)
 Frame = +3

Query: 87  IMLMSQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNV 266
           +  +S+ +  +  VA A R KH+LP+LPY+Y  LEPVIS EIM LHH KHHATY+NNLN 
Sbjct: 6   VRCVSKLVQPITGVA-AVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQ 64

Query: 267 AEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAGEKDF 446
            EEKL +A +KG++   I L PALKFNGGGHINHSIFW NL+ +GG+PS  L  A + DF
Sbjct: 65  IEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDF 124

Query: 447 GSWDNIKNQLSTASVAVQGSGWGWLGYNKQMKKLLIATCQNQDPLQATTGLVPLFGINVW 626
           GS DN++ QLS ++VAVQGSGWGWLGY  + K L +ATC NQDPL+ATTGLVPLFGI+VW
Sbjct: 125 GSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGIDVW 184

Query: 627 EHAYYLQ 647
           EHAYYLQ
Sbjct: 185 EHAYYLQ 191


>D85499-1|BAA12821.1|  221|Caenorhabditis elegans manganese
           superoxide dismutase protein.
          Length = 221

 Score =  260 bits (638), Expect = 5e-70
 Identities = 121/187 (64%), Positives = 146/187 (78%)
 Frame = +3

Query: 87  IMLMSQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNV 266
           +  +S+ +  +  VA A R KH+LP+LPY+Y  LEPVIS EIM LHH KHHATY+NNLN 
Sbjct: 6   VRCVSKLVQPITGVA-AVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQ 64

Query: 267 AEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAGEKDF 446
            EEKL +A +KG++   I L PALKFNGGGHINHSIFW NL+ +GG+PS  L  A + DF
Sbjct: 65  IEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDF 124

Query: 447 GSWDNIKNQLSTASVAVQGSGWGWLGYNKQMKKLLIATCQNQDPLQATTGLVPLFGINVW 626
           GS DN++ QLS ++VAVQGSGWGWLGY  + K L +ATC NQDPL+ATTGLVPLFGI+VW
Sbjct: 125 GSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGIDVW 184

Query: 627 EHAYYLQ 647
           EHAYYLQ
Sbjct: 185 EHAYYLQ 191


>D12984-1|BAA02363.1|  221|Caenorhabditis elegans manganese
           superoxide dismutaseprecursor protein.
          Length = 221

 Score =  260 bits (638), Expect = 5e-70
 Identities = 121/187 (64%), Positives = 146/187 (78%)
 Frame = +3

Query: 87  IMLMSQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNV 266
           +  +S+ +  +  VA A R KH+LP+LPY+Y  LEPVIS EIM LHH KHHATY+NNLN 
Sbjct: 6   VRCVSKLVQPITGVA-AVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQ 64

Query: 267 AEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAGEKDF 446
            EEKL +A +KG++   I L PALKFNGGGHINHSIFW NL+ +GG+PS  L  A + DF
Sbjct: 65  IEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDF 124

Query: 447 GSWDNIKNQLSTASVAVQGSGWGWLGYNKQMKKLLIATCQNQDPLQATTGLVPLFGINVW 626
           GS DN++ QLS ++VAVQGSGWGWLGY  + K L +ATC NQDPL+ATTGLVPLFGI+VW
Sbjct: 125 GSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGIDVW 184

Query: 627 EHAYYLQ 647
           EHAYYLQ
Sbjct: 185 EHAYYLQ 191


>X85790-1|CAA59790.1|  218|Caenorhabditis elegans mangenese
           superoxide dismutase protein.
          Length = 218

 Score =  247 bits (604), Expect = 6e-66
 Identities = 116/176 (65%), Positives = 138/176 (78%), Gaps = 2/176 (1%)
 Frame = +3

Query: 126 VAG--ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK 299
           VAG  A R KHTLP+LP++Y  LEPVIS EIM LHH KHHATY+NNLN  EEKL +A +K
Sbjct: 16  VAGVLAVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75

Query: 300 GDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAGEKDFGSWDNIKNQLS 479
           G++   I L PALKFNGGGHINHSIFW NL+ +GG+PS  L    ++DFGS DN++ +LS
Sbjct: 76  GNLKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLS 135

Query: 480 TASVAVQGSGWGWLGYNKQMKKLLIATCQNQDPLQATTGLVPLFGINVWEHAYYLQ 647
             ++AVQGSGWGWLGY K+ K L IATC NQDPL+   G+VPLFGI+VWEHAYYLQ
Sbjct: 136 DITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGIDVWEHAYYLQ 188


>X77021-1|CAA54319.1|  218|Caenorhabditis elegans manganese
           superoxide dismutase protein.
          Length = 218

 Score =  247 bits (604), Expect = 6e-66
 Identities = 116/176 (65%), Positives = 138/176 (78%), Gaps = 2/176 (1%)
 Frame = +3

Query: 126 VAG--ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK 299
           VAG  A R KHTLP+LP++Y  LEPVIS EIM LHH KHHATY+NNLN  EEKL +A +K
Sbjct: 16  VAGVLAVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75

Query: 300 GDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAGEKDFGSWDNIKNQLS 479
           G++   I L PALKFNGGGHINHSIFW NL+ +GG+PS  L    ++DFGS DN++ +LS
Sbjct: 76  GNLKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLS 135

Query: 480 TASVAVQGSGWGWLGYNKQMKKLLIATCQNQDPLQATTGLVPLFGINVWEHAYYLQ 647
             ++AVQGSGWGWLGY K+ K L IATC NQDPL+   G+VPLFGI+VWEHAYYLQ
Sbjct: 136 DITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGIDVWEHAYYLQ 188


>U42844-5|AAB53822.1|  218|Caenorhabditis elegans Sod (superoxide
           dismutase) protein3 protein.
          Length = 218

 Score =  247 bits (604), Expect = 6e-66
 Identities = 116/176 (65%), Positives = 138/176 (78%), Gaps = 2/176 (1%)
 Frame = +3

Query: 126 VAG--ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK 299
           VAG  A R KHTLP+LP++Y  LEPVIS EIM LHH KHHATY+NNLN  EEKL +A +K
Sbjct: 16  VAGVLAVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75

Query: 300 GDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAGEKDFGSWDNIKNQLS 479
           G++   I L PALKFNGGGHINHSIFW NL+ +GG+PS  L    ++DFGS DN++ +LS
Sbjct: 76  GNLKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLS 135

Query: 480 TASVAVQGSGWGWLGYNKQMKKLLIATCQNQDPLQATTGLVPLFGINVWEHAYYLQ 647
             ++AVQGSGWGWLGY K+ K L IATC NQDPL+   G+VPLFGI+VWEHAYYLQ
Sbjct: 136 DITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGIDVWEHAYYLQ 188


>Z81545-2|CAB04438.1|  212|Caenorhabditis elegans Hypothetical
           protein F49H6.2 protein.
          Length = 212

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +2

Query: 467 ESTVDSFCGSTGLRLGLAWLQQTNEEIANSYVPEPGSSAGHHWIGPALRNQCMGA 631
           + T DS C S G  L     Q+  + +ANS++   G+S+   WIG      CM +
Sbjct: 90  QPTADSLCSSEGAVLSSIQSQEELDYMANSFIALNGASSA-FWIGAERTAACMSS 143


>Z82288-5|CAB05324.1|  380|Caenorhabditis elegans Hypothetical
           protein ZK896.7 protein.
          Length = 380

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +2

Query: 461 HKESTVDSFCGSTGLRLGLAWLQQTNEEIANSYVPEPGSSAGHHWIG 601
           H  +T   +C S G  L       T+  +A+S   E GS+ G  WIG
Sbjct: 42  HTYNTAKEYCDSHGYSLATVDNAITSNFLASSAATEFGSNNGQFWIG 88


>Z46343-8|CAA86461.1|  549|Caenorhabditis elegans Hypothetical
           protein F10F2.9 protein.
          Length = 549

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +3

Query: 420 LTKAGEKDFGSWDNIKNQLSTASVAVQGSGWGWLGYNK 533
           +T+ G++ FGS+ ++      +S    G+G GW G ++
Sbjct: 115 MTRTGKRTFGSYGSVDTAKGQSSAHRAGTGSGWRGSSR 152


>Z35598-9|CAA84658.1|  549|Caenorhabditis elegans Hypothetical
           protein F10F2.9 protein.
          Length = 549

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +3

Query: 420 LTKAGEKDFGSWDNIKNQLSTASVAVQGSGWGWLGYNK 533
           +T+ G++ FGS+ ++      +S    G+G GW G ++
Sbjct: 115 MTRTGKRTFGSYGSVDTAKGQSSAHRAGTGSGWRGSSR 152


>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
            protein FMI-1 protein.
          Length = 2596

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1

Query: 498  VLPQKLSTVDSLCYPRIQSLSHRLW*EHQKACHHLVTG 385
            V+P + S VDS+C    +S  HR W +H+  CH    G
Sbjct: 1733 VVPNRCS-VDSIC--PAESTCHRAWNKHKCKCHKSFVG 1767


>AC006603-7|ABB51201.1|  576|Caenorhabditis elegans Hypothetical
           protein B0524.7 protein.
          Length = 576

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
 Frame = +3

Query: 249 INNLNVAEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIF---WH---NLSPNGGKP 410
           + N      K A+   K    +  N +  LK NG   INH +    W     +  NG  P
Sbjct: 358 LRNAKQKAAKRARKLVKNWKKSAQNKSGVLKINGNHVINHDVVVKKWKVELKIEGNGESP 417

Query: 411 SDVLTKAGEKDFGSWD 458
             V+ KA E   G WD
Sbjct: 418 RKVVRKAKETS-GYWD 432


>AF106573-10|AAC78155.2|  862|Caenorhabditis elegans Gex interacting
           protein protein 12 protein.
          Length = 862

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -3

Query: 520 SQPQPEPCTATEAVDS*FFMLSQDPKSFSPALVRTSEGLPPF 395
           S P P PC + + ++      +QDP S SP   R SE L  F
Sbjct: 658 SDPAPLPCESADRIEYPSQDCTQDPASTSPP-PRISESLTAF 698


>Z74045-4|CAA98554.2|  924|Caenorhabditis elegans Hypothetical
           protein T27F2.2 protein.
          Length = 924

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -2

Query: 227 VMKTHDFTANDRLQCIVLVRKLWQSMLLARSTG 129
           ++  HD++ N R+ C++ V + W  +LL R +G
Sbjct: 556 LVDVHDYSTNQRISCVLGVAQDW-IVLLERPSG 587


>Z74032-11|CAA98469.2|  924|Caenorhabditis elegans Hypothetical
           protein T27F2.2 protein.
          Length = 924

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -2

Query: 227 VMKTHDFTANDRLQCIVLVRKLWQSMLLARSTG 129
           ++  HD++ N R+ C++ V + W  +LL R +G
Sbjct: 556 LVDVHDYSTNQRISCVLGVAQDW-IVLLERPSG 587


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,182,354
Number of Sequences: 27780
Number of extensions: 331372
Number of successful extensions: 893
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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