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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0082
         (658 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79601-3|CAB01883.2|  640|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>Z79601-3|CAB01883.2|  640|Caenorhabditis elegans Hypothetical
           protein K09A9.1 protein.
          Length = 640

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +2

Query: 422 KK*KRELSEPVQ--AFSRGGPVPNSPYSESYTIHWPSFYNVVTGKTLALPNLIALQH 586
           +K  ++LSEPV+  A SR  P    P+  + +     FY+V+  K +  PN+ A  H
Sbjct: 19  RKTAKDLSEPVRQDAVSRRRPT-TLPFVGNTSSRPRVFYDVLAKKNVVFPNVKAEYH 74


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,748,135
Number of Sequences: 27780
Number of extensions: 337897
Number of successful extensions: 734
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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