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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0035
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51994-7|AAO21384.1|  429|Caenorhabditis elegans Elongation fact...   333   5e-92
U51994-6|AAA96068.1|  463|Caenorhabditis elegans Elongation fact...   333   5e-92
U40935-2|AAA81688.1|  463|Caenorhabditis elegans Elongation fact...   333   5e-92
Z92835-1|CAB07395.2|  532|Caenorhabditis elegans Hypothetical pr...   100   8e-22
AF125969-2|AAD14761.1|  613|Caenorhabditis elegans Caenorhabditi...    59   3e-09
L40996-1|AAA86431.1|  593|Caenorhabditis elegans GTP-binding pro...    54   7e-08
Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical pr...    53   2e-07
Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical pr...    53   2e-07
D38472-1|BAA07492.1|  495|Caenorhabditis elegans elongation fact...    52   3e-07
D38471-1|BAA07491.1|  496|Caenorhabditis elegans elongation fact...    52   3e-07
AC024859-25|AAK29979.1|  496|Caenorhabditis elegans Tu elongatio...    52   3e-07
U80437-9|AAN84843.1|  439|Caenorhabditis elegans Tu elongation f...    40   0.002
AB010028-1|BAA31345.1|  439|Caenorhabditis elegans mitochondrial...    40   0.002
Z78200-2|CAB01578.1|  588|Caenorhabditis elegans Hypothetical pr...    39   0.003
Z99709-7|CAB16862.2|  500|Caenorhabditis elegans Hypothetical pr...    32   0.41 
Z99709-6|CAB16863.1|  459|Caenorhabditis elegans Hypothetical pr...    32   0.41 
Z81076-4|CAB03053.1|  172|Caenorhabditis elegans Hypothetical pr...    31   0.71 
U97191-1|AAB52432.1|  805|Caenorhabditis elegans Nuclear pore co...    30   1.6  
AF039711-8|ABS19466.1|  766|Caenorhabditis elegans Hypothetical ...    30   1.6  
Z19158-2|CAA79571.3|  262|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U41007-15|AAQ01538.1|  564|Caenorhabditis elegans Kinesin-like p...    28   5.0  
U41007-14|AAA82277.1|  690|Caenorhabditis elegans Kinesin-like p...    28   5.0  
AB023577-1|BAB82459.1|  690|Caenorhabditis elegans Kinesin like ...    28   5.0  
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ...    27   8.7  

>U51994-7|AAO21384.1|  429|Caenorhabditis elegans Elongation factor
           protein 4, isoformd protein.
          Length = 429

 Score =  333 bits (819), Expect = 5e-92
 Identities = 154/194 (79%), Positives = 171/194 (88%)
 Frame = +1

Query: 4   LPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDN 183
           LPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHHE+L EAVPGDN
Sbjct: 214 LPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDN 273

Query: 184 VGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAH 363
           VGFNVKNVSVK++RRG V  DSK +P K A  F AQVI++NHPGQISNGYTPVLDCHTAH
Sbjct: 274 VGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAH 333

Query: 364 IACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 543
           IACKF E+KEKVDRRTGK  E  PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVR
Sbjct: 334 IACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVR 393

Query: 544 DMRQTVAVGVIKAV 585
           DMRQTVAVGVIK+V
Sbjct: 394 DMRQTVAVGVIKSV 407


>U51994-6|AAA96068.1|  463|Caenorhabditis elegans Elongation factor
           protein 4, isoforma protein.
          Length = 463

 Score =  333 bits (819), Expect = 5e-92
 Identities = 154/194 (79%), Positives = 171/194 (88%)
 Frame = +1

Query: 4   LPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDN 183
           LPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHHE+L EAVPGDN
Sbjct: 248 LPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDN 307

Query: 184 VGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAH 363
           VGFNVKNVSVK++RRG V  DSK +P K A  F AQVI++NHPGQISNGYTPVLDCHTAH
Sbjct: 308 VGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAH 367

Query: 364 IACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 543
           IACKF E+KEKVDRRTGK  E  PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVR
Sbjct: 368 IACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVR 427

Query: 544 DMRQTVAVGVIKAV 585
           DMRQTVAVGVIK+V
Sbjct: 428 DMRQTVAVGVIKSV 441


>U40935-2|AAA81688.1|  463|Caenorhabditis elegans Elongation factor
           protein 3 protein.
          Length = 463

 Score =  333 bits (819), Expect = 5e-92
 Identities = 154/194 (79%), Positives = 171/194 (88%)
 Frame = +1

Query: 4   LPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDN 183
           LPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHHE+L EAVPGDN
Sbjct: 248 LPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDN 307

Query: 184 VGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAH 363
           VGFNVKNVSVK++RRG V  DSK +P K A  F AQVI++NHPGQISNGYTPVLDCHTAH
Sbjct: 308 VGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAH 367

Query: 364 IACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 543
           IACKF E+KEKVDRRTGK  E  PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVR
Sbjct: 368 IACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVR 427

Query: 544 DMRQTVAVGVIKAV 585
           DMRQTVAVGVIK+V
Sbjct: 428 DMRQTVAVGVIKSV 441


>Z92835-1|CAB07395.2|  532|Caenorhabditis elegans Hypothetical
           protein H19N07.1 protein.
          Length = 532

 Score =  100 bits (240), Expect = 8e-22
 Identities = 58/188 (30%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
 Frame = +1

Query: 25  KIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 204
           K   +GTV +G++E+G ++ G  +V  P     +V  +       +  V GDN+ F +K 
Sbjct: 347 KYSEMGTVIIGKMESGCVQKGDTLVVMPNKQPVQVLQIWADDVETERVVAGDNIKFKLKG 406

Query: 205 VSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAE 384
           +   EL+ G++   S ++  K    F A+V+VL H   I++GY+ VL   +A        
Sbjct: 407 IEENELQGGFII-CSPDSLAKTGRVFDAEVLVLEHRSIIASGYSCVLHIQSAVEEVTVKG 465

Query: 385 IKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 564
           +   +D++TG+      K +K  +  I+ L   +P  +E F+E+P LGRF +RD  +T+A
Sbjct: 466 VIATIDKKTGEKKRA--KFVKQDEKCIMRLESPEPFVLEPFKEYPYLGRFTLRDEGKTIA 523

Query: 565 VG-VIKAV 585
           +G V+K V
Sbjct: 524 IGKVLKVV 531


>AF125969-2|AAD14761.1|  613|Caenorhabditis elegans Caenorhabditis
           gtp-binding proteinprotein 1 protein.
          Length = 613

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
 Frame = +1

Query: 10  LQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN----ITTEVKSVEMHHEALQEAVPG 177
           + D+Y + G+GT+  G + +G ++   I++  P +    +   +KS+      +     G
Sbjct: 377 IDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRMPVGIVKCG 436

Query: 178 DNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHT 357
            +  F +K +  K++R+G V  D K  P      F A+++VL+HP  I   Y  +L   +
Sbjct: 437 QSASFALKKIPKKDVRKGMVLVDPKVKPVASMV-FEAEILVLHHPTTIKPNYQAMLHIGS 495

Query: 358 AHIACKFAEIKEKVDRRTGKSTEVNPKSIK 447
                    + ++V  RTG   +V  K I+
Sbjct: 496 VRQTATLVSMGKEV-LRTGDRDKVQFKFIR 524


>L40996-1|AAA86431.1|  593|Caenorhabditis elegans GTP-binding
           protein protein.
          Length = 593

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
 Frame = +1

Query: 10  LQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN----ITTEVKSVEMHHEALQEAVPG 177
           + D+Y + G+GT+  G + +G ++   I++  P +    +   +KS+      +     G
Sbjct: 378 IDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRCLVGIVKCG 437

Query: 178 DNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVL 345
            +  F +K +  K++R+G V  D K  P      F A+++VL+HP  I   Y  +L
Sbjct: 438 QSASFALKKIPKKDVRQGMVLVDPKVKPVASMV-FEAEILVLHHPTTIKPNYQAML 492


>Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical
           protein K07A12.4b protein.
          Length = 592

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 37/193 (19%), Positives = 82/193 (42%), Gaps = 1/193 (0%)
 Frame = +1

Query: 10  LQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVG 189
           + DV K+     V  G++E+G ++     V+  +++T        +++  +    GD + 
Sbjct: 397 ISDVLKVASNQLVVSGKIESGEVEKDD-KVYIMSSVTAATVKECANNDGSRHCFAGDYIL 455

Query: 190 FNVKNVSVKE-LRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHI 366
             ++     E ++ G V   +  +    +  F  +++       I  G    L  H+  +
Sbjct: 456 LTLQGTFEPESIQTGSVVVRAGPDTLIPSKKFEVRLVAFEIAMPIIKGAKAELYAHSLCV 515

Query: 367 ACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRD 546
            C F  +   +++  G+  +  P+ I  G +A+V +     + +E+F     LGR   R 
Sbjct: 516 PCTFTNLLYTINKSNGEILKKGPRFIAKGASAVVEIETEYDIAIETFTSCRALGRVTFRA 575

Query: 547 MRQTVAVGVIKAV 585
              T+A G+++ V
Sbjct: 576 GGNTIAAGIVEKV 588


>Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical
           protein K07A12.4a protein.
          Length = 610

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 37/193 (19%), Positives = 82/193 (42%), Gaps = 1/193 (0%)
 Frame = +1

Query: 10  LQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVG 189
           + DV K+     V  G++E+G ++     V+  +++T        +++  +    GD + 
Sbjct: 415 ISDVLKVASNQLVVSGKIESGEVEKDD-KVYIMSSVTAATVKECANNDGSRHCFAGDYIL 473

Query: 190 FNVKNVSVKE-LRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHI 366
             ++     E ++ G V   +  +    +  F  +++       I  G    L  H+  +
Sbjct: 474 LTLQGTFEPESIQTGSVVVRAGPDTLIPSKKFEVRLVAFEIAMPIIKGAKAELYAHSLCV 533

Query: 367 ACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRD 546
            C F  +   +++  G+  +  P+ I  G +A+V +     + +E+F     LGR   R 
Sbjct: 534 PCTFTNLLYTINKSNGEILKKGPRFIAKGASAVVEIETEYDIAIETFTSCRALGRVTFRA 593

Query: 547 MRQTVAVGVIKAV 585
              T+A G+++ V
Sbjct: 594 GGNTIAAGIVEKV 606


>D38472-1|BAA07492.1|  495|Caenorhabditis elegans elongation factor
           Tu homologueprecursor protein.
          Length = 495

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 6/197 (3%)
 Frame = +1

Query: 13  QDVYKIGGIGTVPVGRVETGVLKPGT-IVVFAPANITTEVKSV----EMHHEALQEAVPG 177
           + VY I G GTV  G++E G+LK G  I +       T VKSV    E   + + +A PG
Sbjct: 257 EHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAEPG 316

Query: 178 DNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHT 357
           D +G  ++ +  K++RRG V    + +  K      AQ+ VL          TP+ +  +
Sbjct: 317 DQLGVLLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLKE--SEGGAKTPIANYFS 373

Query: 358 AHIACKFAEIKEKVDRRTGKSTEVNPKS-IKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 534
            H+          +   +G S  +  K  +  G++A V L  +  + +E      P  RF
Sbjct: 374 EHVF--------SLTWDSGASVRIIGKDFVMPGESAEVELSLNSQMFIE------PQQRF 419

Query: 535 AVRDMRQTVAVGVIKAV 585
            +R   +T+  GV   V
Sbjct: 420 TIRKGAKTIGTGVFTDV 436


>D38471-1|BAA07491.1|  496|Caenorhabditis elegans elongation factor
           Tu homologueprecursor protein.
          Length = 496

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 6/197 (3%)
 Frame = +1

Query: 13  QDVYKIGGIGTVPVGRVETGVLKPGT-IVVFAPANITTEVKSV----EMHHEALQEAVPG 177
           + VY I G GTV  G++E G+LK G  I +       T VKSV    E   + + +A PG
Sbjct: 258 EHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAEPG 317

Query: 178 DNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHT 357
           D +G  ++ +  K++RRG V    + +  K      AQ+ VL          TP+ +  +
Sbjct: 318 DQLGVLLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLKE--SEGGAKTPIANYFS 374

Query: 358 AHIACKFAEIKEKVDRRTGKSTEVNPKS-IKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 534
            H+          +   +G S  +  K  +  G++A V L  +  + +E      P  RF
Sbjct: 375 EHVF--------SLTWDSGASVRIIGKDFVMPGESAEVELSLNSQMFIE------PQQRF 420

Query: 535 AVRDMRQTVAVGVIKAV 585
            +R   +T+  GV   V
Sbjct: 421 TIRKGAKTIGTGVFTDV 437


>AC024859-25|AAK29979.1|  496|Caenorhabditis elegans Tu elongation
           factor (ef-tu), mitochondrialprotein 1 protein.
          Length = 496

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 6/197 (3%)
 Frame = +1

Query: 13  QDVYKIGGIGTVPVGRVETGVLKPGT-IVVFAPANITTEVKSV----EMHHEALQEAVPG 177
           + VY I G GTV  G++E G+LK G  I +       T VKSV    E   + + +A PG
Sbjct: 258 EHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAEPG 317

Query: 178 DNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHT 357
           D +G  ++ +  K++RRG V    + +  K      AQ+ VL          TP+ +  +
Sbjct: 318 DQLGVLLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLKE--SEGGAKTPIANYFS 374

Query: 358 AHIACKFAEIKEKVDRRTGKSTEVNPKS-IKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 534
            H+          +   +G S  +  K  +  G++A V L  +  + +E      P  RF
Sbjct: 375 EHVF--------SLTWDSGASVRIIGKDFVMPGESAEVELSLNSQMFIE------PQQRF 420

Query: 535 AVRDMRQTVAVGVIKAV 585
            +R   +T+  GV   V
Sbjct: 421 TIRKGAKTIGTGVFTDV 437


>U80437-9|AAN84843.1|  439|Caenorhabditis elegans Tu elongation
           factor (ef-tu), mitochondrialprotein 2 protein.
          Length = 439

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
 Frame = +1

Query: 4   LPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFA--PANITTEVKSVEMHHEALQEAVPG 177
           +P+     I G GTV VG +E GVLK G  V        + T    +++  ++++E   G
Sbjct: 242 MPIASKTAITGRGTVIVGTLERGVLKKGDKVEIKGDGQTLQTTASDIQVFGKSVKEVRAG 301

Query: 178 DNVGFNVKNVSVKELRRGYVAG 243
           D+ G   + V    ++RG  AG
Sbjct: 302 DHCGVLCRGVKGDTVKRGMWAG 323


>AB010028-1|BAA31345.1|  439|Caenorhabditis elegans mitochondrial
           elongation factorTu homologue protein.
          Length = 439

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
 Frame = +1

Query: 4   LPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFA--PANITTEVKSVEMHHEALQEAVPG 177
           +P+     I G GTV VG +E GVLK G  V        + T    +++  ++++E   G
Sbjct: 242 MPIASKTAITGRGTVIVGTLERGVLKKGDKVEIKGDGQTLQTTASDIQVFGKSVKEVRAG 301

Query: 178 DNVGFNVKNVSVKELRRGYVAG 243
           D+ G   + V    ++RG  AG
Sbjct: 302 DHCGVLCRGVKGDTVKRGMWAG 323


>Z78200-2|CAB01578.1|  588|Caenorhabditis elegans Hypothetical
           protein T04H1.2 protein.
          Length = 588

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
 Frame = +1

Query: 10  LQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITT----EVKSVEMHHEALQEAVPG 177
           ++++Y +  +G V  G +  G L  G  V+  P    T     V S+    +A+    PG
Sbjct: 407 IEELYNVPHVGQVVGGMLSEGQLHEGADVLVGPMKDGTFEKITVGSIRRSRQAVGCVNPG 466

Query: 178 DNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 309
           +    ++       LRRG V  +  + PP    +FTA +++L H
Sbjct: 467 EAASISLNLPDGVSLRRGMVLAEIDHQPPV-CYEFTANLLLLCH 509


>Z99709-7|CAB16862.2|  500|Caenorhabditis elegans Hypothetical
           protein C47B2.7b protein.
          Length = 500

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 19/65 (29%), Positives = 29/65 (44%)
 Frame = +1

Query: 4   LPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDN 183
           + +   + I G GTV  G V  GVL+  T + F   N    VK++E   + + +   G  
Sbjct: 204 IAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWKQRVGQVAAGAR 263

Query: 184 VGFNV 198
             F V
Sbjct: 264 AAFLV 268


>Z99709-6|CAB16863.1|  459|Caenorhabditis elegans Hypothetical
           protein C47B2.7a protein.
          Length = 459

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 19/65 (29%), Positives = 29/65 (44%)
 Frame = +1

Query: 4   LPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDN 183
           + +   + I G GTV  G V  GVL+  T + F   N    VK++E   + + +   G  
Sbjct: 163 IAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWKQRVGQVAAGAR 222

Query: 184 VGFNV 198
             F V
Sbjct: 223 AAFLV 227


>Z81076-4|CAB03053.1|  172|Caenorhabditis elegans Hypothetical
           protein F35C5.4 protein.
          Length = 172

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
 Frame = -3

Query: 302 STMT*AVKSAAPLGGLFLESPAT*PRRNSLTDTFFTLKPTLSPG-TASWRASWCISTDLT 126
           ST T A+  + P         ++ P   +     FT    +S   + S R S  +S D T
Sbjct: 4   STATVAIIQSEPSTSSSSSPSSSRPEDGATVGNTFTQSSAVSESQSTSERTSRSVSPDST 63

Query: 125 SVVMLAGAKTTMVPGFN--TPVSTLPTGTVPIPPILY 21
            V +      + VP     + VST PT    +PPI Y
Sbjct: 64  PVRVTTSTLLSTVPTSQDISGVSTAPTTKATLPPITY 100


>U97191-1|AAB52432.1|  805|Caenorhabditis elegans Nuclear pore
           complex protein protein11 protein.
          Length = 805

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
 Frame = -3

Query: 311 GWLSTMT*AVKSAAPLGGLFLESPAT*PRRNSLTDTFFTLKPTLSPGTASWRASW---CI 141
           G  ST T A  S AP GGLF  +  T P   + T   F    T +P T            
Sbjct: 446 GASSTTTPA--STAPTGGLFGAATTTAPAAAAPTGGLFGAATTTAPATVGPTGGLFGAAT 503

Query: 140 STDLTSVVMLAGAKTTMVPGFNTPVSTLPTGTVPIP 33
           +T   +   L    +T+    + P +T  T T+P P
Sbjct: 504 TTTPATAATLGQTPSTVSATPSLPTTTSTTSTLPKP 539



 Score = 28.7 bits (61), Expect = 3.8
 Identities = 23/81 (28%), Positives = 32/81 (39%)
 Frame = -3

Query: 293 T*AVKSAAPLGGLFLESPAT*PRRNSLTDTFFTLKPTLSPGTASWRASWCISTDLTSVVM 114
           T A  +AAP GGLF  +  T P     T   F    T +P TA+       +   T  + 
Sbjct: 468 TTAPAAAAPTGGLFGAATTTAPATVGPTGGLFGAATTTTPATAATLGQTPSTVSATPSLP 527

Query: 113 LAGAKTTMVPGFNTPVSTLPT 51
              + T+ +P    P    PT
Sbjct: 528 TTTSTTSTLP---KPAEATPT 545


>AF039711-8|ABS19466.1|  766|Caenorhabditis elegans Hypothetical
           protein F49D11.10 protein.
          Length = 766

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +1

Query: 79  KPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 204
           KPGTI  F P  ITTE K     H  L+  + GD     +++
Sbjct: 360 KPGTIQWFDPVTITTESKM----HVTLENTIDGDMTSRGIRS 397


>Z19158-2|CAA79571.3|  262|Caenorhabditis elegans Hypothetical
           protein T23G5.3 protein.
          Length = 262

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 20/51 (39%), Positives = 25/51 (49%)
 Frame = -3

Query: 647 LPLVAFSAALVTLPPPASLKLTALMTPTATVCLMSRTAKRPRGGNSWKDST 495
           +P+V  +  L   PPP    L +LM P  TV +  R  K P G NS K  T
Sbjct: 129 VPIVPRNLLLSKPPPPPPPPLPSLMQPKDTVQIPMR--KPPTGRNSKKIKT 177


>U41007-15|AAQ01538.1|  564|Caenorhabditis elegans Kinesin-like
           protein protein 10,isoform b protein.
          Length = 564

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 343 LDCHTAHIACKFAEIKEKVDRRTGKSTE 426
           L C    + C+ + +K+K +  T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484


>U41007-14|AAA82277.1|  690|Caenorhabditis elegans Kinesin-like
           protein protein 10,isoform a protein.
          Length = 690

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 343 LDCHTAHIACKFAEIKEKVDRRTGKSTE 426
           L C    + C+ + +K+K +  T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484


>AB023577-1|BAB82459.1|  690|Caenorhabditis elegans Kinesin like
           protein protein.
          Length = 690

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 343 LDCHTAHIACKFAEIKEKVDRRTGKSTE 426
           L C    + C+ + +K+K +  T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484


>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
            Y16B4A.2 protein.
          Length = 2105

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 20/72 (27%), Positives = 30/72 (41%)
 Frame = -3

Query: 221  NSLTDTFFTLKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTPVSTLPTGTV 42
            ++ T T  T   T +PGT     +   +T   S     GA TT  PG    V+  PT  +
Sbjct: 2017 SNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTPST---PGAGTTGTPGTGPTVTAAPTNGI 2073

Query: 41   PIPPILYTSCRG 6
                 + T+ +G
Sbjct: 2074 STTQPIITTTKG 2085


>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
            Y16B4A.2 protein.
          Length = 2105

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 20/72 (27%), Positives = 30/72 (41%)
 Frame = -3

Query: 221  NSLTDTFFTLKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTPVSTLPTGTV 42
            ++ T T  T   T +PGT     +   +T   S     GA TT  PG    V+  PT  +
Sbjct: 2017 SNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTPST---PGAGTTGTPGTGPTVTAAPTNGI 2073

Query: 41   PIPPILYTSCRG 6
                 + T+ +G
Sbjct: 2074 STTQPIITTTKG 2085


>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
            protein Y16B4A.2 protein.
          Length = 2105

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 20/72 (27%), Positives = 30/72 (41%)
 Frame = -3

Query: 221  NSLTDTFFTLKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTPVSTLPTGTV 42
            ++ T T  T   T +PGT     +   +T   S     GA TT  PG    V+  PT  +
Sbjct: 2017 SNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTPST---PGAGTTGTPGTGPTVTAAPTNGI 2073

Query: 41   PIPPILYTSCRG 6
                 + T+ +G
Sbjct: 2074 STTQPIITTTKG 2085


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.135    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,988,149
Number of Sequences: 27780
Number of extensions: 362359
Number of successful extensions: 1153
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)

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