Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0007
(808 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosi... 84 1e-16
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 31 1.3
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 29 3.0
AC006684-10|AAF39962.2| 665|Caenorhabditis elegans Hypothetical... 29 3.0
Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical p... 29 3.9
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical... 29 5.2
Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical p... 28 6.8
Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical pr... 28 6.8
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr... 28 6.8
U29488-3|AAA68772.1| 221|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF022981-2|AAG24200.1| 236|Caenorhabditis elegans Hypothetical ... 28 6.8
Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical pr... 28 9.0
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 28 9.0
>AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosin
(four thymosin repeatprotein) protein 1 protein.
Length = 151
Score = 83.8 bits (198), Expect = 1e-16
Identities = 50/123 (40%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Frame = +2
Query: 92 SLKDLPKVATDLKSQL-EGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDS 268
++ +LPK+ +L + EG L+ V+T EK VLP+ EDVA EK IE FDS
Sbjct: 3 AVTELPKMNQELAGAVREGLE---LKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDS 59
Query: 269 SQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQ 448
++L T +EK LP D I+ EK+ + + I NF LK TET EKN LP+ + +
Sbjct: 60 TKLHSTPVKEKIVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVLPSPTDVAR 119
Query: 449 EKS 457
EK+
Sbjct: 120 EKT 122
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +2
Query: 182 EKIVLPSAEDVATEKTQKSLFDG-IEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFL 358
EK L + + EK +K D +E+ + K E +EK +++ ++ ++E+NK
Sbjct: 120 EKDKLAEEKRLDKEKKEKERLDKKLEEDKKKEEKRKEAEEKKKKDEEEKMKKDEERNKRK 179
Query: 359 NGIENFDPTKLKHTETCEKNPLPTKDVIEQEK 454
E K + E ++ ++ IE+ K
Sbjct: 180 KEEEEKKEAKRREDEEKKEAKRKEEEAIEERK 211
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 334 GEGKEQIPERHRELRSH*AEAHGDVRKEPAPHKGRH*AREISLNHY 471
G+ + Q P+ + RS + GD+ P P A EI L+HY
Sbjct: 320 GQNQPQQPQYQQHPRSQSVDPSGDMNGGPRPIHQNFSASEIELHHY 365
>AC006684-10|AAF39962.2| 665|Caenorhabditis elegans Hypothetical
protein T02H6.2 protein.
Length = 665
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/83 (28%), Positives = 36/83 (43%)
Frame = +2
Query: 206 EDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPT 385
E A +K ++SL K DSS++K ++T NP D I +++ + + F
Sbjct: 537 EAEARKKVEESLK---RKLDSSKVKPSQTSSPNPY--TDTILSDEHLTQLARDLSKFKSN 591
Query: 386 KLKHTETCEKNPLPTKDVIEQEK 454
K C LP DV EK
Sbjct: 592 LAK----CFGTKLPADDVTSDEK 610
>Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical protein
C18D4.2b protein.
Length = 1376
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/75 (25%), Positives = 27/75 (36%)
Frame = +2
Query: 194 LPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIEN 373
LPS D T +K FD+ LK + L D + L+ +N
Sbjct: 1094 LPSTSDEKTPTNRKRSESSESSFDNFMLKLAIKTSLSDLKDDSLTNGASPEVDLLSTSDN 1153
Query: 374 FDPTKLKHTETCEKN 418
PT K ++ E N
Sbjct: 1154 KTPTNRKRSQVSESN 1168
>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/75 (25%), Positives = 27/75 (36%)
Frame = +2
Query: 194 LPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIEN 373
LPS D T +K FD+ LK + L D + L+ +N
Sbjct: 1094 LPSTSDEKTPTNRKRSESSESSFDNFMLKLAIKTSLSDLKDDSLTNGASPEVDLLSTSDN 1153
Query: 374 FDPTKLKHTETCEKN 418
PT K ++ E N
Sbjct: 1154 KTPTNRKRSQVSESN 1168
>Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical
protein C18D4.2b protein.
Length = 1376
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/75 (25%), Positives = 27/75 (36%)
Frame = +2
Query: 194 LPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIEN 373
LPS D T +K FD+ LK + L D + L+ +N
Sbjct: 1094 LPSTSDEKTPTNRKRSESSESSFDNFMLKLAIKTSLSDLKDDSLTNGASPEVDLLSTSDN 1153
Query: 374 FDPTKLKHTETCEKN 418
PT K ++ E N
Sbjct: 1154 KTPTNRKRSQVSESN 1168
>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/75 (25%), Positives = 27/75 (36%)
Frame = +2
Query: 194 LPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIEN 373
LPS D T +K FD+ LK + L D + L+ +N
Sbjct: 1094 LPSTSDEKTPTNRKRSESSESSFDNFMLKLAIKTSLSDLKDDSLTNGASPEVDLLSTSDN 1153
Query: 374 FDPTKLKHTETCEKN 418
PT K ++ E N
Sbjct: 1154 KTPTNRKRSQVSESN 1168
>AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical
protein T12B5.3 protein.
Length = 304
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +3
Query: 555 ITSFIFVFVQWQPCLGNGDVQQPRILFKS*R*VTPYANKQRVDAINRSNTDN 710
ITSFI F++ + C+ ++ R+LF + P+ N + ++ I S TDN
Sbjct: 131 ITSFIN-FLKAKDCIHVKEIHFNRLLFDDILSILPFFNAKVLENIKLSETDN 181
>Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = -3
Query: 311 EAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQSFHWCRRHGD 159
EA S +S + AG Y K S W+ ++ ++++ +H D
Sbjct: 51 EASDSTKSLTSDAGDAILGAYDAAKEKASDAWESTKEMVSEAYEQAEKHAD 101
>Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = -3
Query: 311 EAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQSFHWCRRHGD 159
EA S +S + AG Y K S W+ ++ ++++ +H D
Sbjct: 51 EASDSTKSLTSDAGDAILGAYDAAKEKASDAWESTKEMVSEAYEQAEKHAD 101
>Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = -3
Query: 311 EAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQSFHWCRRHGD 159
EA S +S + AG Y K S W+ ++ ++++ +H D
Sbjct: 51 EASDSTKSLTSDAGDAILGAYDAAKEKASDAWESTKEMVSEAYEQAEKHAD 101
>Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = -3
Query: 311 EAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQSFHWCRRHGD 159
EA S +S + AG Y K S W+ ++ ++++ +H D
Sbjct: 51 EASDSTKSLTSDAGDAILGAYDAAKEKASDAWESTKEMVSEAYEQAEKHAD 101
>Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.7 protein.
Length = 329
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 226 LLSGNVFSRRKHNLFIGVDVTETAGVEAFEL 134
LL N+FS H +F+G+ + E + F+L
Sbjct: 58 LLYQNLFSANIHQIFLGITIVERLNIAFFKL 88
>Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical
protein T23F11.3b protein.
Length = 366
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -3
Query: 323 RLCPEAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRL 207
R P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 73 RSLPKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical
protein T23F11.3a protein.
Length = 356
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -3
Query: 323 RLCPEAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRL 207
R P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 73 RSLPKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical
protein F59A6.5 protein.
Length = 1286
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/93 (21%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +2
Query: 164 RDVDTNEKIVLPSAEDVATEKTQKSLFDGIEK-FDSSQLKHTETQEKNPLPDKDAIEAEK 340
R++ + ++ E + KT+ F+ I+K +S++ + + TQEK K I A++
Sbjct: 387 RELQSLTSLMAERDEQIEELKTKMFSFEMIKKDHESAKNELSRTQEKLDQMGKHLIMADQ 446
Query: 341 EKNKFLNGIENFDPTKLKHTETCEKNPLPTKDV 439
+ + F + E+ + ++ + E C + + +D+
Sbjct: 447 QCSTFKSLKESAEGSRRRAIEQCNEMVVRIRDL 479
>U29488-3|AAA68772.1| 221|Caenorhabditis elegans Hypothetical
protein C56C10.4 protein.
Length = 221
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = -3
Query: 374 SSRCRSGICSFPSPLR*RLCPEAGSSPESRCASAGSNQTSRYRRIKTSGSSQ 219
S C G C P P C AG P C S G +T R+ +G+ Q
Sbjct: 25 SGTCGLGPCFNPLPALPSPCASAGCGPGFSCGSYGCYRTK--ARVHAAGTHQ 74
>AF022981-2|AAG24200.1| 236|Caenorhabditis elegans Hypothetical
protein W03F9.2a protein.
Length = 236
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 278 KHTETQEKNPLPDKDAIEAEKEKNKFLNGIE--NFD 379
KHTET+++ P +K A+K N L +E N+D
Sbjct: 192 KHTETEKEAPPQEKSVTNAQKPGNPALLSLESRNYD 227
>Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical
protein C33G3.6 protein.
Length = 624
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +2
Query: 251 IEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPT 430
IE+F K T ++N ++ E++ E+ +LN I +F + H LP+
Sbjct: 98 IEQFFGENQKSTRNSDQNAKNHEEDPESDDEETAYLNLIRSFKKEESMHDLKNASGKLPS 157
Query: 431 KD 436
+
Sbjct: 158 SN 159
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 27.9 bits (59), Expect = 9.0
Identities = 25/91 (27%), Positives = 34/91 (37%)
Frame = +2
Query: 80 SDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEK 259
SD+ K K D K Q E + D +K +D E+ K D EK
Sbjct: 113 SDSSEDKKKRKQMRDKKKQEEEDKKKEEEEKDKKKKDKKKEEDDEEEEQKDKKKKD--EK 170
Query: 260 FDSSQLKHTETQEKNPLPDKDAIEAEKEKNK 352
D + + +K D D E EK+K K
Sbjct: 171 NDDDDEEDKKKDKKKKKDDNDEEEKEKDKKK 201
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,648,499
Number of Sequences: 27780
Number of extensions: 386120
Number of successful extensions: 1266
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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