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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0035
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51994-6|AAA96068.1|  463|Caenorhabditis elegans Elongation fact...   365   e-101
U40935-2|AAA81688.1|  463|Caenorhabditis elegans Elongation fact...   365   e-101
U51994-9|AAO21383.1|  267|Caenorhabditis elegans Elongation fact...   308   4e-84
U51994-7|AAO21384.1|  429|Caenorhabditis elegans Elongation fact...   244   4e-79
Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical pr...   214   5e-56
Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical pr...   214   5e-56
Z92835-1|CAB07395.2|  532|Caenorhabditis elegans Hypothetical pr...   206   2e-53
U51994-8|AAO21382.1|   77|Caenorhabditis elegans Elongation fact...   138   3e-33
D38472-1|BAA07492.1|  495|Caenorhabditis elegans elongation fact...    92   4e-19
D38471-1|BAA07491.1|  496|Caenorhabditis elegans elongation fact...    92   4e-19
AC024859-25|AAK29979.1|  496|Caenorhabditis elegans Tu elongatio...    92   4e-19
U80437-9|AAN84843.1|  439|Caenorhabditis elegans Tu elongation f...    91   8e-19
AB010028-1|BAA31345.1|  439|Caenorhabditis elegans mitochondrial...    91   8e-19
L13200-4|AAA28191.2|  645|Caenorhabditis elegans Hypothetical pr...    58   9e-09
AC006714-2|AAK29716.2|  689|Caenorhabditis elegans Hypothetical ...    56   2e-08
Z81519-1|CAB04216.1|  750|Caenorhabditis elegans Hypothetical pr...    56   3e-08
Z70780-15|CAA94822.2|  702|Caenorhabditis elegans Hypothetical p...    42   4e-05
M86959-1|AAD03339.1|  852|Caenorhabditis elegans elongation fact...    46   4e-05
Z81068-5|CAB02985.1|  852|Caenorhabditis elegans Hypothetical pr...    45   5e-05
Z99709-7|CAB16862.2|  500|Caenorhabditis elegans Hypothetical pr...    42   4e-04
AF125969-2|AAD14761.1|  613|Caenorhabditis elegans Caenorhabditi...    42   6e-04
Z83235-9|CAI79209.1|  705|Caenorhabditis elegans Hypothetical pr...    39   0.004
Z83235-8|CAB05774.2|  894|Caenorhabditis elegans Hypothetical pr...    39   0.004
L40996-1|AAA86431.1|  593|Caenorhabditis elegans GTP-binding pro...    37   0.013
AC025716-9|AAK39619.1|  469|Caenorhabditis elegans Hypothetical ...    37   0.018
U50193-2|AAA91248.1|  974|Caenorhabditis elegans Elongation fact...    35   0.071
M86958-1|AAA21824.1|  849|Caenorhabditis elegans eft-1 protein.        35   0.071
Z78200-2|CAB01578.1|  588|Caenorhabditis elegans Hypothetical pr...    33   0.29 
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr...    32   0.38 
AC024817-55|AAF59563.3|  366|Caenorhabditis elegans Hypothetical...    31   0.66 
Z66513-12|CAI46602.1|  492|Caenorhabditis elegans Hypothetical p...    29   2.7  
Z66513-11|CAA91332.3|  427|Caenorhabditis elegans Hypothetical p...    29   2.7  
Z99709-6|CAB16863.1|  459|Caenorhabditis elegans Hypothetical pr...    29   4.7  

>U51994-6|AAA96068.1|  463|Caenorhabditis elegans Elongation factor
           protein 4, isoforma protein.
          Length = 463

 Score =  365 bits (897), Expect = e-101
 Identities = 172/195 (88%), Positives = 177/195 (90%)
 Frame = +2

Query: 38  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 217
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60

Query: 218 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGT 397
           DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+V  GT
Sbjct: 61  DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120

Query: 398 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDXTEPPYSEPRFEEIKKEVCSYXKK 577
           GEFEAGISKNGQTREHALLA TLGVKQLIV  NKMD TEPP+SE RF EI  EV  + KK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180

Query: 578 IGYNPAAXAFVPIXG 622
           IGYNP A  FVPI G
Sbjct: 181 IGYNPKAVPFVPISG 195



 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 23/32 (71%), Positives = 25/32 (78%)
 Frame = +1

Query: 631 GDNMLEPSTKMPWFRGWQVERKEGKADGNALL 726
           GDNMLE S+ MPWF+GW VERKEG A G  LL
Sbjct: 198 GDNMLEVSSNMPWFKGWAVERKEGNASGKTLL 229


>U40935-2|AAA81688.1|  463|Caenorhabditis elegans Elongation factor
           protein 3 protein.
          Length = 463

 Score =  365 bits (897), Expect = e-101
 Identities = 172/195 (88%), Positives = 177/195 (90%)
 Frame = +2

Query: 38  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 217
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60

Query: 218 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGT 397
           DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+V  GT
Sbjct: 61  DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120

Query: 398 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDXTEPPYSEPRFEEIKKEVCSYXKK 577
           GEFEAGISKNGQTREHALLA TLGVKQLIV  NKMD TEPP+SE RF EI  EV  + KK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180

Query: 578 IGYNPAAXAFVPIXG 622
           IGYNP A  FVPI G
Sbjct: 181 IGYNPKAVPFVPISG 195



 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 23/32 (71%), Positives = 25/32 (78%)
 Frame = +1

Query: 631 GDNMLEPSTKMPWFRGWQVERKEGKADGNALL 726
           GDNMLE S+ MPWF+GW VERKEG A G  LL
Sbjct: 198 GDNMLEVSSNMPWFKGWAVERKEGNASGKTLL 229


>U51994-9|AAO21383.1|  267|Caenorhabditis elegans Elongation factor
           protein 4, isoformc protein.
          Length = 267

 Score =  308 bits (755), Expect = 4e-84
 Identities = 161/228 (70%), Positives = 172/228 (75%)
 Frame = +2

Query: 38  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 217
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60

Query: 218 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGT 397
           DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+V  GT
Sbjct: 61  DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120

Query: 398 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDXTEPPYSEPRFEEIKKEVCSYXKK 577
           GEFEAGISKNGQTREHALLA TLGVKQL   V+    T  P S  R + I++        
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR-----LFH 172

Query: 578 IGYNPAAXAFVPIXGMARETTCWSLQPKCLGSGDGRWSVRKAKXTEMP 721
           +  +P           + ETTC      C GS DG  + RK    E P
Sbjct: 173 LSQSPD----------STETTCLRSPRTCHGSRDGLLNARKETLPERP 210


>U51994-7|AAO21384.1|  429|Caenorhabditis elegans Elongation factor
           protein 4, isoformd protein.
          Length = 429

 Score =  244 bits (598), Expect(2) = 4e-79
 Identities = 112/116 (96%), Positives = 115/116 (99%)
 Frame = +2

Query: 38  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 217
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60

Query: 218 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 385
           DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+V
Sbjct: 61  DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVV 116



 Score = 68.9 bits (161), Expect(2) = 4e-79
 Identities = 31/48 (64%), Positives = 34/48 (70%)
 Frame = +2

Query: 479 LIVGVNKMDXTEPPYSEPRFEEIKKEVCSYXKKIGYNPAAXAFVPIXG 622
           L+V  NKMD TEPP+SE RF EI  EV  + KKIGYNP A  FVPI G
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISG 161



 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 23/32 (71%), Positives = 25/32 (78%)
 Frame = +1

Query: 631 GDNMLEPSTKMPWFRGWQVERKEGKADGNALL 726
           GDNMLE S+ MPWF+GW VERKEG A G  LL
Sbjct: 164 GDNMLEVSSNMPWFKGWAVERKEGNASGKTLL 195


>Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical
           protein K07A12.4b protein.
          Length = 592

 Score =  214 bits (523), Expect = 5e-56
 Identities = 104/197 (52%), Positives = 138/197 (70%), Gaps = 1/197 (0%)
 Frame = +2

Query: 47  EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 226
           +K  IN++V+GHVD+GKST  GHL++    +D RTI+KF+ EA   GK SF YAWVLD+ 
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226

Query: 227 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEF 406
           + ERERG+T+DI    FETS   + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286

Query: 407 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDXTEPPYSEPRFEEIKKEVCSY-XKKIG 583
           E G    GQT+EHALL  +LGV QLIV VNK+D  +  +S+ RF+EIK  +  +  ++ G
Sbjct: 287 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 344

Query: 584 YNPAAXAFVPIXGMARE 634
           +  +   FVP+ G   E
Sbjct: 345 F--SKPKFVPVSGFTGE 359


>Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical
           protein K07A12.4a protein.
          Length = 610

 Score =  214 bits (523), Expect = 5e-56
 Identities = 104/197 (52%), Positives = 138/197 (70%), Gaps = 1/197 (0%)
 Frame = +2

Query: 47  EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 226
           +K  IN++V+GHVD+GKST  GHL++    +D RTI+KF+ EA   GK SF YAWVLD+ 
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244

Query: 227 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEF 406
           + ERERG+T+DI    FETS   + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304

Query: 407 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDXTEPPYSEPRFEEIKKEVCSY-XKKIG 583
           E G    GQT+EHALL  +LGV QLIV VNK+D  +  +S+ RF+EIK  +  +  ++ G
Sbjct: 305 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 362

Query: 584 YNPAAXAFVPIXGMARE 634
           +  +   FVP+ G   E
Sbjct: 363 F--SKPKFVPVSGFTGE 377


>Z92835-1|CAB07395.2|  532|Caenorhabditis elegans Hypothetical
           protein H19N07.1 protein.
          Length = 532

 Score =  206 bits (502), Expect = 2e-53
 Identities = 93/196 (47%), Positives = 134/196 (68%), Gaps = 1/196 (0%)
 Frame = +2

Query: 41  GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 220
           G  K HIN+V +GHVD+GKST  G L++  G +DKRT+EK+E+EA+E G+ S+  +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163

Query: 221 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 400
               ERE+G T+++    FET K + TI+DAPGH+ F+ NMI G +QAD AVL++ A  G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223

Query: 401 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDXTEPPYSEPRFEEIKKEVCSYXKKI 580
           EFE G  + GQTREH++L  T GVK L++ VNKMD     + E RF+EI+ ++  + +K+
Sbjct: 224 EFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKL 283

Query: 581 GYNPAA-XAFVPIXGM 625
           G+NP     +VP  G+
Sbjct: 284 GFNPKTDITYVPCSGL 299


>U51994-8|AAO21382.1|   77|Caenorhabditis elegans Elongation factor
           protein 4, isoformb protein.
          Length = 77

 Score =  138 bits (335), Expect = 3e-33
 Identities = 63/67 (94%), Positives = 64/67 (95%)
 Frame = +2

Query: 38  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 217
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60

Query: 218 DKLKAER 238
           DKLK  +
Sbjct: 61  DKLKVTK 67


>D38472-1|BAA07492.1|  495|Caenorhabditis elegans elongation factor
           Tu homologueprecursor protein.
          Length = 495

 Score = 91.9 bits (218), Expect = 4e-19
 Identities = 64/183 (34%), Positives = 94/183 (51%), Gaps = 2/183 (1%)
 Frame = +2

Query: 44  KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 223
           ++K H+N+  IGHVD GK+T T  +             K+E                +D 
Sbjct: 45  RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89

Query: 224 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGE 403
              E+ RGITI+    ++ET+K +   ID PGH D+IKNMITG +Q + A+L+V A  G 
Sbjct: 90  APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149

Query: 404 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDXTEPPYSEPRFEEIKKEVCSYXKK 577
                    QTREH LLA  +GV    ++V +NK+D  E P +E R E ++ ++     +
Sbjct: 150 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 199

Query: 578 IGY 586
            GY
Sbjct: 200 FGY 202


>D38471-1|BAA07491.1|  496|Caenorhabditis elegans elongation factor
           Tu homologueprecursor protein.
          Length = 496

 Score = 91.9 bits (218), Expect = 4e-19
 Identities = 64/183 (34%), Positives = 94/183 (51%), Gaps = 2/183 (1%)
 Frame = +2

Query: 44  KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 223
           ++K H+N+  IGHVD GK+T T  +             K+E                +D 
Sbjct: 46  RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90

Query: 224 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGE 403
              E+ RGITI+    ++ET+K +   ID PGH D+IKNMITG +Q + A+L+V A  G 
Sbjct: 91  APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150

Query: 404 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDXTEPPYSEPRFEEIKKEVCSYXKK 577
                    QTREH LLA  +GV    ++V +NK+D  E P +E R E ++ ++     +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200

Query: 578 IGY 586
            GY
Sbjct: 201 FGY 203


>AC024859-25|AAK29979.1|  496|Caenorhabditis elegans Tu elongation
           factor (ef-tu), mitochondrialprotein 1 protein.
          Length = 496

 Score = 91.9 bits (218), Expect = 4e-19
 Identities = 64/183 (34%), Positives = 94/183 (51%), Gaps = 2/183 (1%)
 Frame = +2

Query: 44  KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 223
           ++K H+N+  IGHVD GK+T T  +             K+E                +D 
Sbjct: 46  RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90

Query: 224 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGE 403
              E+ RGITI+    ++ET+K +   ID PGH D+IKNMITG +Q + A+L+V A  G 
Sbjct: 91  APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150

Query: 404 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDXTEPPYSEPRFEEIKKEVCSYXKK 577
                    QTREH LLA  +GV    ++V +NK+D  E P +E R E ++ ++     +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200

Query: 578 IGY 586
            GY
Sbjct: 201 FGY 203


>U80437-9|AAN84843.1|  439|Caenorhabditis elegans Tu elongation
           factor (ef-tu), mitochondrialprotein 2 protein.
          Length = 439

 Score = 91.1 bits (216), Expect = 8e-19
 Identities = 60/157 (38%), Positives = 85/157 (54%), Gaps = 2/157 (1%)
 Frame = +2

Query: 50  KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 223
           K ++N+  IGH+D GK+T T  +  +    G  K    KF++               +DK
Sbjct: 43  KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85

Query: 224 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGE 403
            K E++RGITI++A   +E+     +  D PGH DFIKNMI GTSQ D AVL++ A  G 
Sbjct: 86  GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145

Query: 404 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDXTE 514
            E       QT+EH +LA  +GVK + + +NK D  E
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE 175


>AB010028-1|BAA31345.1|  439|Caenorhabditis elegans mitochondrial
           elongation factorTu homologue protein.
          Length = 439

 Score = 91.1 bits (216), Expect = 8e-19
 Identities = 60/157 (38%), Positives = 85/157 (54%), Gaps = 2/157 (1%)
 Frame = +2

Query: 50  KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 223
           K ++N+  IGH+D GK+T T  +  +    G  K    KF++               +DK
Sbjct: 43  KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85

Query: 224 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGE 403
            K E++RGITI++A   +E+     +  D PGH DFIKNMI GTSQ D AVL++ A  G 
Sbjct: 86  GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145

Query: 404 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDXTE 514
            E       QT+EH +LA  +GVK + + +NK D  E
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE 175


>L13200-4|AAA28191.2|  645|Caenorhabditis elegans Hypothetical
           protein ZK1236.1 protein.
          Length = 645

 Score = 57.6 bits (133), Expect = 9e-09
 Identities = 46/148 (31%), Positives = 66/148 (44%)
 Frame = +2

Query: 62  NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 241
           N  ++ HVD GKST    L+  CG +        +K+             +LDKL+ ERE
Sbjct: 44  NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85

Query: 242 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEAGIS 421
           RGIT+           Y + +ID PGH DF   +    +  D  +L+V A  G       
Sbjct: 86  RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138

Query: 422 KNGQTREHALLAFTLGVKQLIVGVNKMD 505
              QT  +  LAF   + Q+I  +NK+D
Sbjct: 139 VQAQTIANFWLAFEKNI-QIIPVINKID 165


>AC006714-2|AAK29716.2|  689|Caenorhabditis elegans Hypothetical
           protein Y119D3B.14 protein.
          Length = 689

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 39/113 (34%), Positives = 53/113 (46%)
 Frame = +2

Query: 62  NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 241
           NI VI HVD+GK+T T  L+Y  G I           A  + KG+     V D L  ERE
Sbjct: 27  NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73

Query: 242 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 400
           RGIT+  A    +   + + +ID PGH DF   +       D  V+++    G
Sbjct: 74  RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126


>Z81519-1|CAB04216.1|  750|Caenorhabditis elegans Hypothetical
           protein F29C12.4 protein.
          Length = 750

 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 47/148 (31%), Positives = 65/148 (43%)
 Frame = +2

Query: 62  NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 241
           NI +  H+DSGK+T T  ++Y  G ID            E+ +G       +D +  ER+
Sbjct: 46  NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95

Query: 242 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEAGIS 421
           RGITI  A    +     + IID PGH DF   +       D AVL++  G G    G+ 
Sbjct: 96  RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQ 150

Query: 422 KNGQTREHALLAFTLGVKQLIVGVNKMD 505
               T    L  + +     I  VNKMD
Sbjct: 151 SQTFTVNRQLARYNV---PFICFVNKMD 175


>Z70780-15|CAA94822.2|  702|Caenorhabditis elegans Hypothetical
           protein F46B6.6a protein.
          Length = 702

 Score = 41.9 bits (94), Expect(2) = 4e-05
 Identities = 37/108 (34%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
 Frame = +2

Query: 185 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 361
           GK +   A    ++ A    GIT  I  +  E +K   VT +D PGH  F      G   
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227

Query: 362 ADCAVLIVXAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 505
           AD  VL+V A  G  E       QT +    A    V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267



 Score = 23.0 bits (47), Expect(2) = 4e-05
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 65  IVVIGHVDSGKST 103
           + ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171


>M86959-1|AAD03339.1|  852|Caenorhabditis elegans elongation factor
           protein.
          Length = 852

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
 Frame = +2

Query: 38  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 190
           M +++   N+ VI HVD GKST T  L+ K G I   K    +F    K+ QE    +  
Sbjct: 13  MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72

Query: 191 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 358
            +    + L+K   E  +G     T+++   K + + + + +ID+PGH DF   +     
Sbjct: 73  TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALG 132

Query: 359 QADCAVLIVXAGTG 400
             D A+++V   +G
Sbjct: 133 VTDGALVVVDCVSG 146


>Z81068-5|CAB02985.1|  852|Caenorhabditis elegans Hypothetical
           protein F25H5.4 protein.
          Length = 852

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
 Frame = +2

Query: 38  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 190
           M +++   N+ VI HVD GKST T  L+ K G I   K    +F    K+ QE    +  
Sbjct: 13  MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72

Query: 191 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 358
            +    + L+K   E  +G     T+++   K + + + + +ID+PGH DF   +     
Sbjct: 73  TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALR 132

Query: 359 QADCAVLIVXAGTG 400
             D A+++V   +G
Sbjct: 133 VTDGALVVVDCVSG 146


>Z99709-7|CAB16862.2|  500|Caenorhabditis elegans Hypothetical
           protein C47B2.7b protein.
          Length = 500

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 1/166 (0%)
 Frame = +2

Query: 59  INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 238
           +N+ ++GHVDSGK+T T                   +   E+G  S   A          
Sbjct: 14  LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54

Query: 239 ERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEAG 415
            R  T+D+      + S   + +ID PGH   I+ ++  ++  D A++I+     +  AG
Sbjct: 55  RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108

Query: 416 ISKNGQTREHALLAFTLGVKQLIVGVNKMDXTEPPYSEPRFEEIKK 553
           I    QT EH LLA      ++I+ +NK D  E        ++++K
Sbjct: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLAEKSKISESAKKVRK 152


>AF125969-2|AAD14761.1|  613|Caenorhabditis elegans Caenorhabditis
           gtp-binding proteinprotein 1 protein.
          Length = 613

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 55/198 (27%), Positives = 82/198 (41%), Gaps = 11/198 (5%)
 Frame = +2

Query: 14  FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKEAQEM 184
           ++IRD P   K+     + V+G+VD+GKST  G L +     G    RT     K   E 
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFES 185

Query: 185 GKGSFKYAWVL------DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMI 346
           G+ S     +L      + +         +D      + +K  VT ID  GH  ++K  I
Sbjct: 186 GRTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEKYLKTTI 244

Query: 347 TGTS--QADCAVLIVXAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDXTEPP 520
            G +    D  +L++ A  G         G T+EH  LA +L V   +V V K+D     
Sbjct: 245 FGMTGHMPDYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKIDMCPAN 296

Query: 521 YSEPRFEEIKKEVCSYXK 574
             E   + I + V S  K
Sbjct: 297 ILEETMKNITRLVRSAKK 314


>Z83235-9|CAI79209.1|  705|Caenorhabditis elegans Hypothetical
           protein K10C3.5b protein.
          Length = 705

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
 Frame = +2

Query: 44  KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 220
           K   HI N+ ++ HVD GK++    L+     I  R              G  +Y   +D
Sbjct: 15  KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59

Query: 221 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 385
             + E+ RGIT+  +          + +ID+PGH DF   + +    +D A+L++
Sbjct: 60  SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114


>Z83235-8|CAB05774.2|  894|Caenorhabditis elegans Hypothetical
           protein K10C3.5a protein.
          Length = 894

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
 Frame = +2

Query: 44  KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 220
           K   HI N+ ++ HVD GK++    L+     I  R              G  +Y   +D
Sbjct: 15  KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59

Query: 221 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 385
             + E+ RGIT+  +          + +ID+PGH DF   + +    +D A+L++
Sbjct: 60  SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114


>L40996-1|AAA86431.1|  593|Caenorhabditis elegans GTP-binding
           protein protein.
          Length = 593

 Score = 37.1 bits (82), Expect = 0.013
 Identities = 54/199 (27%), Positives = 82/199 (41%), Gaps = 12/199 (6%)
 Frame = +2

Query: 14  FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKEAQEM 184
           ++IRD P   K+     + V+G+VD+GKST  G L +     G    RT     K   E 
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFES 185

Query: 185 GKGSFKYAWVL------DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMI 346
           G+ S     +L      + +         +D      + +K  VT ID  GH  ++K  I
Sbjct: 186 GRTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEIYLKTTI 244

Query: 347 TGTSQ---ADCAVLIVXAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDXTEP 517
            G  +    +  +L++ A  G         G T+EH  LA +L V   +V V K+D    
Sbjct: 245 FGMHRPYARNYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKIDMCPA 296

Query: 518 PYSEPRFEEIKKEVCSYXK 574
              E   + I + V S  K
Sbjct: 297 YILEETMKNITRLVRSAKK 315


>AC025716-9|AAK39619.1|  469|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.8 protein.
          Length = 469

 Score = 36.7 bits (81), Expect = 0.018
 Identities = 23/85 (27%), Positives = 39/85 (45%)
 Frame = +2

Query: 293 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEAGISKNGQTREHALLAFTLGV 472
           +V+ +D PGH   +  M+ G +  D A L+V AG            QT EH      + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLV-AGNEP-----CPQPQTSEHLAAVEIMQL 181

Query: 473 KQLIVGVNKMDXTEPPYSEPRFEEI 547
             L++  NK+D  +   +   +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206


>U50193-2|AAA91248.1|  974|Caenorhabditis elegans Elongation factor
           protein 1 protein.
          Length = 974

 Score = 34.7 bits (76), Expect = 0.071
 Identities = 28/113 (24%), Positives = 47/113 (41%)
 Frame = +2

Query: 62  NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 241
           N+ + GH+  GK+T    L+       ++T  +F +   E     F     ++K +    
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184

Query: 242 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 400
           +   + I      +  Y + IID PGH +F   M      AD  V++V A  G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237


>M86958-1|AAA21824.1|  849|Caenorhabditis elegans eft-1 protein.
          Length = 849

 Score = 34.7 bits (76), Expect = 0.071
 Identities = 28/113 (24%), Positives = 47/113 (41%)
 Frame = +2

Query: 62  NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 241
           N+ + GH+  GK+T    L+       ++T  +F +   E     F     ++K +    
Sbjct: 9   NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59

Query: 242 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 400
           +   + I      +  Y + IID PGH +F   M      AD  V++V A  G
Sbjct: 60  KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112


>Z78200-2|CAB01578.1|  588|Caenorhabditis elegans Hypothetical
           protein T04H1.2 protein.
          Length = 588

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 8/199 (4%)
 Frame = +2

Query: 11  QFVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEM 184
           + ++R  P+  ++   + + V+G  D GKST  G L   C   G  K  I  F +   E+
Sbjct: 154 EVLVRKVPE-SQQFIEVRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEV 211

Query: 185 GKGSFKYAWVLDKLKAERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITG 352
             G  K + V + +     RG  ++ A        E S   VT+ID  G   + K  I G
Sbjct: 212 RTG--KTSSVCNDVIGFDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHG 269

Query: 353 TS--QADCAVLIVXAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDXTEPPYS 526
            +      A L+V A     + GI+    TREH  L   L +   ++ + KMD  +    
Sbjct: 270 LTGYTPHFACLVVAA-----DRGIT--WATREHLGLIAALNIPMFVL-ITKMDLVD---- 317

Query: 527 EPRFEEIKKEVCSYXKKIG 583
               ++I K+V +   K G
Sbjct: 318 RQGLKKIIKDVSNLVAKAG 336


>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
           translation initiationfactor eIF5B protein.
          Length = 1074

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 25/78 (32%), Positives = 35/78 (44%)
 Frame = +2

Query: 302 IIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEAGISKNGQTREHALLAFTLGVKQL 481
           IID PGH  F      G+S  D A+L+V     +   G+    QT E +L     G    
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604

Query: 482 IVGVNKMDXTEPPYSEPR 535
           ++ +NK+D      S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622


>AC024817-55|AAF59563.3|  366|Caenorhabditis elegans Hypothetical
           protein Y54G2A.28 protein.
          Length = 366

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = -1

Query: 498 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAXTMSTA 370
           LF PT+SC+  +  AS   S   P +  PA N  VP  T+S +
Sbjct: 13  LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54


>Z66513-12|CAI46602.1|  492|Caenorhabditis elegans Hypothetical
           protein F54D5.5b protein.
          Length = 492

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 140 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 241
           +KR ++  EKE  +     F Y   LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305


>Z66513-11|CAA91332.3|  427|Caenorhabditis elegans Hypothetical
           protein F54D5.5a protein.
          Length = 427

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 140 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 241
           +KR ++  EKE  +     F Y   LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240


>Z99709-6|CAB16863.1|  459|Caenorhabditis elegans Hypothetical
           protein C47B2.7a protein.
          Length = 459

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +2

Query: 59  INIVVIGHVDSGKSTTT 109
           +N+ ++GHVDSGK+T T
Sbjct: 14  LNLGILGHVDSGKTTLT 30


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,551,549
Number of Sequences: 27780
Number of extensions: 343078
Number of successful extensions: 919
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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