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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0105
         (661 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21309-6|AAT92086.1|  541|Caenorhabditis elegans Hypothetical pr...    31   0.55 
U21309-4|AAN73883.1|  546|Caenorhabditis elegans Hypothetical pr...    31   0.55 
AY314778-1|AAQ84885.1|  546|Caenorhabditis elegans calcitonin re...    31   0.55 
AY314777-1|AAQ84884.1|  541|Caenorhabditis elegans calcitonin re...    31   0.55 
U21309-5|AAT92085.1|  536|Caenorhabditis elegans Hypothetical pr...    31   0.96 
AY314776-1|AAQ84883.1|  536|Caenorhabditis elegans calcitonin re...    31   0.96 
U46675-1|AAB52645.2|  524|Caenorhabditis elegans Hypothetical pr...    30   1.7  
U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical p...    30   1.7  
Z75713-4|CAB00050.1|  603|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z72504-5|CAA96602.2|  812|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z72504-4|CAH60755.1|  653|Caenorhabditis elegans Hypothetical pr...    28   6.8  
X91045-1|CAA62505.1|  693|Caenorhabditis elegans let-653 protein.      28   6.8  

>U21309-6|AAT92086.1|  541|Caenorhabditis elegans Hypothetical
           protein C13B9.4c protein.
          Length = 541

 Score = 31.5 bits (68), Expect = 0.55
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
 Frame = -3

Query: 596 WCNCVY*ICVFWTPDPGAC-----CPCIKGISNSCHQMKECEMS 480
           WCN  Y   + W P P        CP +KG+  + +  K+C +S
Sbjct: 73  WCNATYDTVLCWPPTPANSSVTLQCPHMKGLDPNKNITKDCHVS 116


>U21309-4|AAN73883.1|  546|Caenorhabditis elegans Hypothetical
           protein C13B9.4a protein.
          Length = 546

 Score = 31.5 bits (68), Expect = 0.55
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
 Frame = -3

Query: 596 WCNCVY*ICVFWTPDPGAC-----CPCIKGISNSCHQMKECEMS 480
           WCN  Y   + W P P        CP +KG+  + +  K+C +S
Sbjct: 73  WCNATYDTVLCWPPTPANSSVTLQCPHMKGLDPNKNITKDCHVS 116


>AY314778-1|AAQ84885.1|  546|Caenorhabditis elegans calcitonin
           receptor-like proteinSEB-1C protein.
          Length = 546

 Score = 31.5 bits (68), Expect = 0.55
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
 Frame = -3

Query: 596 WCNCVY*ICVFWTPDPGAC-----CPCIKGISNSCHQMKECEMS 480
           WCN  Y   + W P P        CP +KG+  + +  K+C +S
Sbjct: 73  WCNATYDTVLCWPPTPANSSVTLQCPHMKGLDPNKNITKDCHVS 116


>AY314777-1|AAQ84884.1|  541|Caenorhabditis elegans calcitonin
           receptor-like proteinSEB-1B protein.
          Length = 541

 Score = 31.5 bits (68), Expect = 0.55
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
 Frame = -3

Query: 596 WCNCVY*ICVFWTPDPGAC-----CPCIKGISNSCHQMKECEMS 480
           WCN  Y   + W P P        CP +KG+  + +  K+C +S
Sbjct: 73  WCNATYDTVLCWPPTPANSSVTLQCPHMKGLDPNKNITKDCHVS 116


>U21309-5|AAT92085.1|  536|Caenorhabditis elegans Hypothetical
           protein C13B9.4b protein.
          Length = 536

 Score = 30.7 bits (66), Expect = 0.96
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
 Frame = -3

Query: 596 WCNCVY*ICVFWTPDPGAC-----CPCIKGISNSCHQMKECE 486
           WCN  Y   + W P P        CP +KG+  + + +K C+
Sbjct: 73  WCNATYDTVLCWPPTPANSSVTLQCPHMKGLDPNKYIVKRCD 114


>AY314776-1|AAQ84883.1|  536|Caenorhabditis elegans calcitonin
           receptor-like proteinSEB-1A protein.
          Length = 536

 Score = 30.7 bits (66), Expect = 0.96
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
 Frame = -3

Query: 596 WCNCVY*ICVFWTPDPGAC-----CPCIKGISNSCHQMKECE 486
           WCN  Y   + W P P        CP +KG+  + + +K C+
Sbjct: 73  WCNATYDTVLCWPPTPANSSVTLQCPHMKGLDPNKYIVKRCD 114


>U46675-1|AAB52645.2|  524|Caenorhabditis elegans Hypothetical
           protein F35A5.4 protein.
          Length = 524

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = -3

Query: 641 KPSCAGFIMPTCGAAWCNCVY*ICVFWTPDPGACCP-CIKGISNSCHQMKECEMSDHSWR 465
           +P+CA   MP+C  + C   Y I    T +   C P C+   S++C Q   C    ++  
Sbjct: 171 RPTCASSCMPSCSQS-CIQKYEI----TVEQETCVPACMPACSSACVQAVTCSTCTNNCP 225

Query: 464 THCS 453
           + CS
Sbjct: 226 SICS 229


>U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical
           protein T08A9.1 protein.
          Length = 1330

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = +2

Query: 353 QTASENHDRSYKLYNMYKRPENLEVPLSATRDAKNSVYAMNDQTFHTPSFGDKN 514
           +T+     R +K  N  KR   LE  L +  + KN V+ +  Q   TP   D+N
Sbjct: 270 ETSKNQEYRDFKGIN--KRFSQLEFSLKSCEERKNLVHKLVAQILETPKINDQN 321


>Z75713-4|CAB00050.1|  603|Caenorhabditis elegans Hypothetical
           protein T01G9.3 protein.
          Length = 603

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 533 CIKGISNSCHQMKECEMSDHSWRTHC 456
           C   + +SC  + EC+ +D SW  +C
Sbjct: 16  CSIALPSSCPNLCECDQNDSSWSVYC 41


>Z72504-5|CAA96602.2|  812|Caenorhabditis elegans Hypothetical
           protein C29E6.1a protein.
          Length = 812

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 18/56 (32%), Positives = 24/56 (42%)
 Frame = -3

Query: 647 GAKPSCAGFIMPTCGAAWCNCVY*ICVFWTPDPGACCPCIKGISNSCHQMKECEMS 480
           GAK S   F   T G    +C+  IC F  P P   C  ++G  +S       E+S
Sbjct: 683 GAKVSVEAFRYQTTGQVQYSCLVRICPF-APCPKNTCDDVEGCDSSYMHRYRRELS 737


>Z72504-4|CAH60755.1|  653|Caenorhabditis elegans Hypothetical
           protein C29E6.1b protein.
          Length = 653

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 18/56 (32%), Positives = 24/56 (42%)
 Frame = -3

Query: 647 GAKPSCAGFIMPTCGAAWCNCVY*ICVFWTPDPGACCPCIKGISNSCHQMKECEMS 480
           GAK S   F   T G    +C+  IC F  P P   C  ++G  +S       E+S
Sbjct: 524 GAKVSVEAFRYQTTGQVQYSCLVRICPF-APCPKNTCDDVEGCDSSYMHRYRRELS 578


>X91045-1|CAA62505.1|  693|Caenorhabditis elegans let-653 protein.
          Length = 693

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 18/56 (32%), Positives = 24/56 (42%)
 Frame = -3

Query: 647 GAKPSCAGFIMPTCGAAWCNCVY*ICVFWTPDPGACCPCIKGISNSCHQMKECEMS 480
           GAK S   F   T G    +C+  IC F  P P   C  ++G  +S       E+S
Sbjct: 564 GAKVSVEAFRYQTTGQVQYSCLVRICPF-APCPKNTCDDVEGCDSSYMHRYRRELS 618


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,160,821
Number of Sequences: 27780
Number of extensions: 350762
Number of successful extensions: 905
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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