Silkworm BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10b03
         (714 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70780-7|CAA94824.1|  411|Caenorhabditis elegans Hypothetical pr...    39   0.003
AF067942-3|AAL11486.1|  351|Caenorhabditis elegans Hypothetical ...    38   0.007
AF067942-2|AAG45574.1|  403|Caenorhabditis elegans Hypothetical ...    38   0.007
AF022976-9|AAC69088.2|  404|Caenorhabditis elegans Hypothetical ...    38   0.009
AL117200-4|CAB60584.1|  401|Caenorhabditis elegans Hypothetical ...    36   0.022
AC024835-2|AAK68537.1|  684|Caenorhabditis elegans Hypothetical ...    36   0.029
U64849-2|AAC48051.1|  411|Caenorhabditis elegans Hypothetical pr...    34   0.12 
AC119287-1|AAO38568.1|  218|Caenorhabditis elegans Glutathione s...    30   1.4  
Z93379-1|CAB07589.1|  218|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z73426-6|CAA97796.2|  853|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z73425-9|CAA97791.2|  853|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z99709-2|CAB16859.1|  307|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z81479-4|CAB03939.1|  116|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z79696-2|CAB01973.1|  405|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z72512-6|CAD44143.2|  657|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z70780-7|CAA94824.1|  411|Caenorhabditis elegans Hypothetical
           protein F46B6.8 protein.
          Length = 411

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 14/40 (35%), Positives = 28/40 (70%)
 Frame = +3

Query: 567 ENNEDFHLNATELLKKHQYPVEEHTVATDDGYHLTVLRIP 686
           +++ + ++N ++++++  Y  E HTV T+DGY L + RIP
Sbjct: 26  DDDPELNMNTSQIIERWGYKAEVHTVTTEDGYILQMQRIP 65


>AF067942-3|AAL11486.1|  351|Caenorhabditis elegans Hypothetical
           protein ZK6.7b protein.
          Length = 351

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 15/36 (41%), Positives = 24/36 (66%)
 Frame = +3

Query: 579 DFHLNATELLKKHQYPVEEHTVATDDGYHLTVLRIP 686
           + H+   +++++  YP   +TVATDDGY L + RIP
Sbjct: 24  ELHMTTPQIIERWGYPAMIYTVATDDGYILEMHRIP 59


>AF067942-2|AAG45574.1|  403|Caenorhabditis elegans Hypothetical
           protein ZK6.7a protein.
          Length = 403

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 15/36 (41%), Positives = 24/36 (66%)
 Frame = +3

Query: 579 DFHLNATELLKKHQYPVEEHTVATDDGYHLTVLRIP 686
           + H+   +++++  YP   +TVATDDGY L + RIP
Sbjct: 24  ELHMTTPQIIERWGYPAMIYTVATDDGYILEMHRIP 59


>AF022976-9|AAC69088.2|  404|Caenorhabditis elegans Hypothetical
           protein R11G11.14 protein.
          Length = 404

 Score = 37.5 bits (83), Expect = 0.009
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = +3

Query: 546 AISETQRENNEDFHLNATELLKKHQYPVEEHTVATDDGYHLTVLRIP 686
           A+     +++ + H+   +++++  YP   ++V TDDGY L + RIP
Sbjct: 14  AVHNVHAKSDPELHMTTPQIIERWGYPAMIYSVTTDDGYILELHRIP 60


>AL117200-4|CAB60584.1|  401|Caenorhabditis elegans Hypothetical
           protein Y50E8A.7 protein.
          Length = 401

 Score = 36.3 bits (80), Expect = 0.022
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +3

Query: 588 LNATELLKKHQYPVEEHTVATDDGYHLTVLRIP 686
           L+A + +  + Y VE+H V TDDGY + + RIP
Sbjct: 23  LDAADTISHYGYTVEKHYVTTDDGYTVQLQRIP 55


>AC024835-2|AAK68537.1|  684|Caenorhabditis elegans Hypothetical
           protein Y57E12B.3 protein.
          Length = 684

 Score = 35.9 bits (79), Expect = 0.029
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +3

Query: 588 LNATELLKKHQYPVEEHTVATDDGYHLTVLRIP 686
           ++  E++    YPVE H V T DGY LT+ RIP
Sbjct: 275 MDVPEIITHWGYPVETHKVVTVDGYILTLHRIP 307


>U64849-2|AAC48051.1|  411|Caenorhabditis elegans Hypothetical
           protein K04A8.5 protein.
          Length = 411

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = +3

Query: 549 ISETQRENNEDFHLNATELLKKHQYPVEEHTVATDDGYHLTVLRIP 686
           +S   +  + +F+L+  EL+K   Y VE +   T DG+ L + RIP
Sbjct: 21  LSNYSKSVDLEFYLDTPELIKSWGYSVEIYNTTTKDGFILELHRIP 66


>AC119287-1|AAO38568.1|  218|Caenorhabditis elegans Glutathione
           s-transferase protein34 protein.
          Length = 218

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
 Frame = +3

Query: 294 EDETKQVHDKMNVKHHSPVYSVIMKLKKEVDINH--GDSVVWKNIEMASGPNSPVQ-TEQ 464
           E+E K++HD++ +   + ++ ++ ++ KE    +  GD + W ++ +A    S     E 
Sbjct: 124 EEEVKRIHDEVYIPVKNLLFKILTRILKESKSEYLVGDGLTWADLVVADHLYSLTNIKEL 183

Query: 465 DIEDIFGDSLKTW 503
           D ED    +LK +
Sbjct: 184 DPEDPIHLNLKKY 196


>Z93379-1|CAB07589.1|  218|Caenorhabditis elegans Hypothetical
           protein F21H7.1 protein.
          Length = 218

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 12/47 (25%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +3

Query: 297 DETKQVHDKMNVKHHSPVYSVIMKLKKEVDINH--GDSVVWKNIEMA 431
           +E KQ+HDK+ +   + ++ ++ ++ KE       GD + W ++ +A
Sbjct: 125 EEVKQIHDKVYIPAKNLMFKILTRILKENKSGFLVGDGLTWADLVVA 171


>Z73426-6|CAA97796.2|  853|Caenorhabditis elegans Hypothetical
           protein F12F6.1 protein.
          Length = 853

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +3

Query: 420 IEMASGPNSPVQTEQDIEDIFGDSLKTWDHFTDDAKKNTFHDAI 551
           +E A+G  +P+  +   + +F D++  +    D AK+N  HDA+
Sbjct: 345 LEAANG-QAPIYAQSLAKILFADTIMMYFKDQDTAKRNWLHDAV 387


>Z73425-9|CAA97791.2|  853|Caenorhabditis elegans Hypothetical
           protein F12F6.1 protein.
          Length = 853

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +3

Query: 420 IEMASGPNSPVQTEQDIEDIFGDSLKTWDHFTDDAKKNTFHDAI 551
           +E A+G  +P+  +   + +F D++  +    D AK+N  HDA+
Sbjct: 345 LEAANG-QAPIYAQSLAKILFADTIMMYFKDQDTAKRNWLHDAV 387


>Z99709-2|CAB16859.1|  307|Caenorhabditis elegans Hypothetical
           protein C47B2.2a protein.
          Length = 307

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
 Frame = +3

Query: 510 FTD-DAKKNTFHDAISETQRENNEDFHLNATELLK------KHQYPVEEHTVATDDGY 662
           F+D ++K   FH      +  N+ DF  NA  L++       +  P  EHTV T  G+
Sbjct: 114 FSDFESKFRYFHKFPGPKRSTNHSDFVFNADRLMRLVIEECLNHLPFTEHTVTTPTGF 171


>Z81479-4|CAB03939.1|  116|Caenorhabditis elegans Hypothetical
           protein C34F6.5 protein.
          Length = 116

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
 Frame = +3

Query: 414 KNIEMASGPNSP----VQTEQDIEDIFGDSLKTWDHFTDDAKKN 533
           +N+E A+GP+ P    VQ EQD+E+I  D  +  D   +D  +N
Sbjct: 37  RNMEHAAGPSPPVEQGVQLEQDLEEII-DIHEVDDEEEEDEDQN 79


>Z79696-2|CAB01973.1|  405|Caenorhabditis elegans Hypothetical
           protein F54F3.3 protein.
          Length = 405

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +3

Query: 579 DFHLNATELLKKHQYPVEEHTVATDDGYHLTVLRIP 686
           +  +   +++ +  YP   + V T+DGY L + RIP
Sbjct: 26  EMKMTTPQIIMRWGYPAMIYDVTTEDGYILELHRIP 61


>Z72512-6|CAD44143.2|  657|Caenorhabditis elegans Hypothetical
           protein R07B5.9 protein.
          Length = 657

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 618 QYPVEEHTVATDDGYHLTVLRIPPHAPKP 704
           + P+ ++ + T D YH +    PPH+P P
Sbjct: 230 EVPITDYNIPTPDSYHSS----PPHSPTP 254


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,426,907
Number of Sequences: 27780
Number of extensions: 270680
Number of successful extensions: 794
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)