Silkworm BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10b05
         (751 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr...    32   0.38 
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr...    32   0.38 
AF025462-2|AAN72422.1| 1075|Caenorhabditis elegans Phospholipase...    32   0.38 
AF025462-1|AAN72423.1| 1068|Caenorhabditis elegans Phospholipase...    32   0.38 
AC024826-10|AAM97977.1|  435|Caenorhabditis elegans Hypothetical...    30   1.5  
AC024826-8|AAF60795.2|  580|Caenorhabditis elegans Hypothetical ...    30   1.5  
U51997-1|AAG24067.1|  572|Caenorhabditis elegans Activated in bl...    30   2.0  
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p...    29   2.7  
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.      29   2.7  
Z83244-7|CAB05829.1|  318|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81552-4|CAB04488.2|  765|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z75952-5|CAB00093.2|  149|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z49886-6|CAI79131.1|  149|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z49886-5|CAA90055.1|  152|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z68342-5|CAA92774.2|  416|Caenorhabditis elegans Hypothetical pr...    29   4.7  
AC024807-1|AAF59529.5|  704|Caenorhabditis elegans Hypothetical ...    29   4.7  
Z79695-4|CAB01969.3|  374|Caenorhabditis elegans Hypothetical pr...    28   8.1  
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p...    28   8.1  

>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical protein
            F59A2.6 protein.
          Length = 1133

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = +1

Query: 514  EGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRL-NELDAKLNM 690
            EGE  +L D+IE +   VKKL   +E   V  +T    V    ++   +L NEL+ K   
Sbjct: 910  EGEAKELTDRIEGLEAEVKKLTAANETKAVKADTDARKVVRELQKEVKQLYNELNDKNQQ 969

Query: 691  LQSAEKLKTAIVTESKMA 744
                ++  T + T  + A
Sbjct: 970  FDMVQEELTRLKTSKETA 987


>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical protein
            F59A2.6 protein.
          Length = 1133

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = +1

Query: 514  EGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRL-NELDAKLNM 690
            EGE  +L D+IE +   VKKL   +E   V  +T    V    ++   +L NEL+ K   
Sbjct: 910  EGEAKELTDRIEGLEAEVKKLTAANETKAVKADTDARKVVRELQKEVKQLYNELNDKNQQ 969

Query: 691  LQSAEKLKTAIVTESKMA 744
                ++  T + T  + A
Sbjct: 970  FDMVQEELTRLKTSKETA 987


>AF025462-2|AAN72422.1| 1075|Caenorhabditis elegans Phospholipase c
            like protein 1,isoform a protein.
          Length = 1075

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 21/97 (21%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
 Frame = +1

Query: 445  GLLKILMRLNFDNKSNALLH-LQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFK 621
            G L   ++ +F+   N + H + T  + D L  KIE  ++ + + +    K         
Sbjct: 942  GTLPDQLQRSFNKLKNLIAHCVTTLSQSDQLLSKIEDSIRRISECHEELSKLCAEAGLKG 1001

Query: 622  NDVGNRFEQFELRLNELDAKLNMLQSAEKLKTAIVTE 732
                   E F   L  L A+LN++  +++    +VT+
Sbjct: 1002 QKATRAAENFTWNLRLLKAQLNLMNKSQEEAQDVVTQ 1038


>AF025462-1|AAN72423.1| 1068|Caenorhabditis elegans Phospholipase c
            like protein 1,isoform b protein.
          Length = 1068

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 21/97 (21%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
 Frame = +1

Query: 445  GLLKILMRLNFDNKSNALLH-LQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFK 621
            G L   ++ +F+   N + H + T  + D L  KIE  ++ + + +    K         
Sbjct: 935  GTLPDQLQRSFNKLKNLIAHCVTTLSQSDQLLSKIEDSIRRISECHEELSKLCAEAGLKG 994

Query: 622  NDVGNRFEQFELRLNELDAKLNMLQSAEKLKTAIVTE 732
                   E F   L  L A+LN++  +++    +VT+
Sbjct: 995  QKATRAAENFTWNLRLLKAQLNLMNKSQEEAQDVVTQ 1031


>AC024826-10|AAM97977.1|  435|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.3c protein.
          Length = 435

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = -1

Query: 535 ANHHARLQFEGAATRCFCCQNLTASKFSTTPAWSRTMR 422
           A H    Q    AT+CF   N+      T PAW   +R
Sbjct: 263 AQHAGHSQIPSIATQCFLLSNMFDPSKETEPAWDHDIR 300


>AC024826-8|AAF60795.2|  580|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.3a protein.
          Length = 580

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = -1

Query: 535 ANHHARLQFEGAATRCFCCQNLTASKFSTTPAWSRTMR 422
           A H    Q    AT+CF   N+      T PAW   +R
Sbjct: 408 AQHAGHSQIPSIATQCFLLSNMFDPSKETEPAWDHDIR 445


>U51997-1|AAG24067.1|  572|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 2 protein.
          Length = 572

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
 Frame = -1

Query: 352 RCPNCNQVCR-RAQFQDLCKNLLHCRILRSCRCARICT*NCA--CCI*MNPI*RCATIVG 182
           +C  C   C+       +   +L   + +S +C   C  +C   C   + PI +CAT   
Sbjct: 470 QCQQCQSACQFPVVAPQVVAVILEASVSQSAQCEPQCQQSCQQQCIQQLQPIQQCATACT 529

Query: 181 RLCGTFCS 158
           + C   CS
Sbjct: 530 QSCSQSCS 537


>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
            C35C5.1 protein.
          Length = 2962

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 541  KIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRF 642
            K+E   + + KL  N +K  ++H++ KND   RF
Sbjct: 1738 KLERDFEEIVKLIQNEKKLALSHKSHKNDENRRF 1771


>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
            protein C35C5.1 protein.
          Length = 2962

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 541  KIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRF 642
            K+E   + + KL  N +K  ++H++ KND   RF
Sbjct: 1738 KLERDFEEIVKLIQNEKKLALSHKSHKNDENRRF 1771


>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
          Length = 2962

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 541  KIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRF 642
            K+E   + + KL  N +K  ++H++ KND   RF
Sbjct: 1738 KLERDFEEIVKLIQNEKKLALSHKSHKNDENRRF 1771


>Z83244-7|CAB05829.1|  318|Caenorhabditis elegans Hypothetical
           protein W06F12.3 protein.
          Length = 318

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 16/60 (26%), Positives = 30/60 (50%)
 Frame = +1

Query: 346 DSDQVYHLNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGER 525
           D DQVYH  +++    +S++    +G  F T    L+++ R    N  N ++ L++   R
Sbjct: 246 DQDQVYHAKQLLLRNFQSRK----MGQNFGTFPRALELIKRTETPNYENFIVILKSCSSR 301


>Z81552-4|CAB04488.2|  765|Caenorhabditis elegans Hypothetical
           protein F56G4.6 protein.
          Length = 765

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 692 SMLSLASSSFKRNSNCSNLLPTSFLNVSWVT 600
           ++L L   S K   NCS +LP SF  +  +T
Sbjct: 109 TLLKLCKKSIKTTGNCSKILPISFRELPGLT 139


>Z75952-5|CAB00093.2|  149|Caenorhabditis elegans Hypothetical
           protein F29D10.2 protein.
          Length = 149

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = -1

Query: 340 CNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 224
           C   C R +    C+    C   R+C C R CT    CC
Sbjct: 64  CGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRPCC 102


>Z49886-6|CAI79131.1|  149|Caenorhabditis elegans Hypothetical
           protein C06A1.7 protein.
          Length = 149

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = -1

Query: 340 CNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 224
           C   C R +    C+    C   R+C C R CT    CC
Sbjct: 66  CGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRPCC 104


>Z49886-5|CAA90055.1|  152|Caenorhabditis elegans Hypothetical
           protein C06A1.6 protein.
          Length = 152

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = -1

Query: 340 CNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 224
           C   C R +    C+    C   R+C C R CT    CC
Sbjct: 69  CGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRPCC 107


>Z68342-5|CAA92774.2|  416|Caenorhabditis elegans Hypothetical
           protein F38E11.6a protein.
          Length = 416

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +1

Query: 526 DDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQ 648
           D+L  +I +V +++   N + + F+V   +FKN    +F++
Sbjct: 303 DNLTAQISAVYRYIASHNRHDDNFLVVVPSFKNQDAEKFKR 343


>AC024807-1|AAF59529.5|  704|Caenorhabditis elegans Hypothetical
           protein Y53G8AL.1 protein.
          Length = 704

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/69 (24%), Positives = 35/69 (50%)
 Frame = +1

Query: 538 DKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNMLQSAEKLKT 717
           D +  + K V+ L TN ++  +T  +FK D  N    FE+  ++L + +     AE   +
Sbjct: 96  DTVTRISKLVESLKTNLDQ--LTEHSFKEDRPNSVLFFEITHDDLKSSIKKYSDAEGSMS 153

Query: 718 AIVTESKMA 744
           ++ +  K++
Sbjct: 154 SLGSVKKIS 162


>Z79695-4|CAB01969.3|  374|Caenorhabditis elegans Hypothetical
           protein F27D4.4a protein.
          Length = 374

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +1

Query: 310 EIAHDDILDCNWDSDQVYHLNEIIFHKQKSK 402
           E+  D+  + NWDSD+   LNE++  K K+K
Sbjct: 133 EVEKDEETNENWDSDK---LNEVVNKKNKNK 160


>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
            protein F48E3.8a protein.
          Length = 2427

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/38 (31%), Positives = 15/38 (39%)
 Frame = -1

Query: 547  QFCRANHHARLQFEGAATRCFCCQNLTASKFSTTPAWS 434
            ++C  N H   Q +     C C  N   S FS  P  S
Sbjct: 1265 EYCFRNSHCESQRQCLKNVCKCASNFVQSSFSCVPRMS 1302


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,152,485
Number of Sequences: 27780
Number of extensions: 307033
Number of successful extensions: 1178
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1162
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)