Silkworm BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10a09
         (550 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g...    29   2.9  
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ...    29   2.9  
AC024809-10|AAF59547.1|  272|Caenorhabditis elegans Hypothetical...    28   3.9  
Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z82083-2|CAB04970.1|  263|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z81593-12|CAB04744.1| 1274|Caenorhabditis elegans Hypothetical p...    27   8.9  
AL023822-2|CAA19440.1| 1274|Caenorhabditis elegans Hypothetical ...    27   8.9  

>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
            protein.
          Length = 1492

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = -1

Query: 250  QSRQVLPMVVQGAHCGYQGADAIHGGIQG 164
            Q  Q      QGAH G QGA   H G QG
Sbjct: 1004 QGEQFGAQGAQGAHFGAQGAQGAHFGAQG 1032


>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
            protein Y53H1C.2a protein.
          Length = 1512

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = -1

Query: 250  QSRQVLPMVVQGAHCGYQGADAIHGGIQG 164
            Q  Q      QGAH G QGA   H G QG
Sbjct: 1024 QGEQFGAQGAQGAHFGAQGAQGAHFGAQG 1052


>AC024809-10|AAF59547.1|  272|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.1 protein.
          Length = 272

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = -3

Query: 200 PGSGCDPWRYPRVD--CAIVPASPTAGTT 120
           PGS CDP RY  +D  C++ P + T  TT
Sbjct: 179 PGSACDPDRY-NIDGLCSLNPPTTTTTTT 206


>Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical protein
            ZC84.6 protein.
          Length = 1474

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +3

Query: 249  CTTKQVCTKVGGIQ-RACLDPTLPYCNLGECSATPAEGCEP 368
            CT     T   G Q  A +D ++ YC  G+   T ++GC P
Sbjct: 890  CTIGHFVTCPAGFQCMAQIDGSMGYCCKGQPQLTASDGCPP 930


>Z82083-2|CAB04970.1|  263|Caenorhabditis elegans Hypothetical
           protein ZK1010.4 protein.
          Length = 263

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = +3

Query: 285 IQRACLDPTLPYCNLGECSATPAEGCEPASGASVAPTA*YSILKH-TRKYITDTKKKIFL 461
           +  ACL   +  C    C+A PA  C P+S         Y   ++  R  +T   + IF+
Sbjct: 17  VTEACLSSGV--CGSSYCAAPPAVSCSPSSCQPGYSCGQYGCARNRARSAVTQKVEGIFI 74

Query: 462 EKT-NKKCNQK 491
           + + N K N +
Sbjct: 75  DDSGNSKENSR 85


>Z81593-12|CAB04744.1| 1274|Caenorhabditis elegans Hypothetical
            protein Y102A5A.1 protein.
          Length = 1274

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +3

Query: 474  KKCNQKCFFTIM*SCLINMNISKF 545
            +KC  +C FT++ SC+  ++I++F
Sbjct: 1122 RKCAFECMFTLLESCVDKIDITQF 1145


>AL023822-2|CAA19440.1| 1274|Caenorhabditis elegans Hypothetical
            protein Y102A5A.1 protein.
          Length = 1274

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +3

Query: 474  KKCNQKCFFTIM*SCLINMNISKF 545
            +KC  +C FT++ SC+  ++I++F
Sbjct: 1122 RKCAFECMFTLLESCVDKIDITQF 1145


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,826,743
Number of Sequences: 27780
Number of extensions: 242353
Number of successful extensions: 645
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)