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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060091.seq
         (626 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81068-5|CAB02985.1|  852|Caenorhabditis elegans Hypothetical pr...   136   9e-33
M86959-1|AAD03339.1|  852|Caenorhabditis elegans elongation fact...   136   9e-33
Z83235-9|CAI79209.1|  705|Caenorhabditis elegans Hypothetical pr...    69   4e-12
Z83235-8|CAB05774.2|  894|Caenorhabditis elegans Hypothetical pr...    69   4e-12
U50193-2|AAA91248.1|  974|Caenorhabditis elegans Elongation fact...    65   3e-11
M86958-1|AAA21824.1|  849|Caenorhabditis elegans eft-1 protein.        65   3e-11
AC006714-2|AAK29716.2|  689|Caenorhabditis elegans Hypothetical ...    58   7e-09
Z81519-1|CAB04216.1|  750|Caenorhabditis elegans Hypothetical pr...    57   1e-08
L13200-4|AAA28191.2|  645|Caenorhabditis elegans Hypothetical pr...    55   4e-08
D38472-1|BAA07492.1|  495|Caenorhabditis elegans elongation fact...    40   0.001
D38471-1|BAA07491.1|  496|Caenorhabditis elegans elongation fact...    40   0.001
AC024859-25|AAK29979.1|  496|Caenorhabditis elegans Tu elongatio...    40   0.001
U80437-9|AAN84843.1|  439|Caenorhabditis elegans Tu elongation f...    38   0.008
AB010028-1|BAA31345.1|  439|Caenorhabditis elegans mitochondrial...    38   0.008
Z99709-7|CAB16862.2|  500|Caenorhabditis elegans Hypothetical pr...    35   0.041
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr...    34   0.072
U51994-9|AAO21383.1|  267|Caenorhabditis elegans Elongation fact...    33   0.22 
U51994-8|AAO21382.1|   77|Caenorhabditis elegans Elongation fact...    33   0.22 
U51994-7|AAO21384.1|  429|Caenorhabditis elegans Elongation fact...    33   0.22 
U51994-6|AAA96068.1|  463|Caenorhabditis elegans Elongation fact...    33   0.22 
U40935-2|AAA81688.1|  463|Caenorhabditis elegans Elongation fact...    33   0.22 
AL132862-30|CAB60565.3|  716|Caenorhabditis elegans Hypothetical...    33   0.22 
Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical pr...    32   0.29 
Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical pr...    32   0.29 
U39996-6|AAA81092.1|  595|Caenorhabditis elegans Hypothetical pr...    32   0.39 
Z70780-15|CAA94822.2|  702|Caenorhabditis elegans Hypothetical p...    31   0.51 
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter...    30   1.2  
AF000264-4|AAC71125.3|  631|Caenorhabditis elegans Hypothetical ...    30   1.6  
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist...    29   2.7  
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele...    29   2.7  
Z83225-2|CAB05722.1|  732|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z81097-19|CAB03177.1|  732|Caenorhabditis elegans Hypothetical p...    29   3.6  
Z82053-8|CAB61018.2|  309|Caenorhabditis elegans Hypothetical pr...    28   6.3  
AF070968-1|AAD15926.1|  309|Caenorhabditis elegans PAR-6 protein.      28   6.3  
Z99709-6|CAB16863.1|  459|Caenorhabditis elegans Hypothetical pr...    27   8.3  

>Z81068-5|CAB02985.1|  852|Caenorhabditis elegans Hypothetical
           protein F25H5.4 protein.
          Length = 852

 Score =  136 bits (330), Expect = 9e-33
 Identities = 63/70 (90%), Positives = 69/70 (98%)
 Frame = +3

Query: 48  MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 227
           MVNFTVDEIR +MD+KRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAG++AGETRFTDTR
Sbjct: 1   MVNFTVDEIRALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTR 60

Query: 228 KDEQDRCITL 257
           KDEQ+RCIT+
Sbjct: 61  KDEQERCITI 70



 Score =  134 bits (323), Expect = 6e-32
 Identities = 72/93 (77%), Positives = 77/93 (82%), Gaps = 8/93 (8%)
 Frame = +2

Query: 254 LKSTAISMFFELEEKDLVFITNPDQRE------KSEK--GFLINLIDSPGHVDFSSEVTA 409
           +KSTAIS+FFELE+KDL F+   +Q E      K EK  GFLINLIDSPGHVDFSSEVTA
Sbjct: 70  IKSTAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTA 129

Query: 410 ALRVTDGALXVVDCVSGVCVQTETVLRQAXAER 508
           ALRVTDGAL VVDCVSGVCVQTETVLRQA AER
Sbjct: 130 ALRVTDGALVVVDCVSGVCVQTETVLRQAIAER 162



 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 27/59 (45%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +1

Query: 451 CVWXVCTN*NSTA-SGXCRALKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVII 624
           CV  VC    +         +KP+LFMNKMDR            +QTFQRIVEN+NVII
Sbjct: 143 CVSGVCVQTETVLRQAIAERIKPVLFMNKMDRALLELQLGAEELFQTFQRIVENINVII 201


>M86959-1|AAD03339.1|  852|Caenorhabditis elegans elongation factor
           protein.
          Length = 852

 Score =  136 bits (330), Expect = 9e-33
 Identities = 63/70 (90%), Positives = 69/70 (98%)
 Frame = +3

Query: 48  MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 227
           MVNFTVDEIR +MD+KRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAG++AGETRFTDTR
Sbjct: 1   MVNFTVDEIRALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTR 60

Query: 228 KDEQDRCITL 257
           KDEQ+RCIT+
Sbjct: 61  KDEQERCITI 70



 Score =  131 bits (316), Expect = 5e-31
 Identities = 71/93 (76%), Positives = 76/93 (81%), Gaps = 8/93 (8%)
 Frame = +2

Query: 254 LKSTAISMFFELEEKDLVFITNPDQRE------KSEK--GFLINLIDSPGHVDFSSEVTA 409
           +KSTAIS+FFELE+KDL F+   +Q E      K EK  GFLINLIDSPGHVDFSSEVTA
Sbjct: 70  IKSTAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTA 129

Query: 410 ALRVTDGALXVVDCVSGVCVQTETVLRQAXAER 508
           AL VTDGAL VVDCVSGVCVQTETVLRQA AER
Sbjct: 130 ALGVTDGALVVVDCVSGVCVQTETVLRQAIAER 162



 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 27/59 (45%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +1

Query: 451 CVWXVCTN*NSTA-SGXCRALKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVII 624
           CV  VC    +         +KP+LFMNKMDR            +QTFQRIVEN+NVII
Sbjct: 143 CVSGVCVQTETVLRQAIAERIKPVLFMNKMDRALLELQLGAEELFQTFQRIVENINVII 201


>Z83235-9|CAI79209.1|  705|Caenorhabditis elegans Hypothetical
           protein K10C3.5b protein.
          Length = 705

 Score = 68.5 bits (160), Expect = 4e-12
 Identities = 30/47 (63%), Positives = 39/47 (82%)
 Frame = +2

Query: 353 LINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETVLRQ 493
           LINLIDSPGHVDFS EVT+AL ++D AL ++D + G+C QTE ++RQ
Sbjct: 84  LINLIDSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQTEALIRQ 130



 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 27/53 (50%), Positives = 40/53 (75%)
 Frame = +3

Query: 99  NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITL 257
           +IRN+ ++AHVDHGK++  DSLVS   +I+   AG+ R+ D+R+DEQ R IT+
Sbjct: 19  HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGITM 71


>Z83235-8|CAB05774.2|  894|Caenorhabditis elegans Hypothetical
           protein K10C3.5a protein.
          Length = 894

 Score = 68.5 bits (160), Expect = 4e-12
 Identities = 30/47 (63%), Positives = 39/47 (82%)
 Frame = +2

Query: 353 LINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETVLRQ 493
           LINLIDSPGHVDFS EVT+AL ++D AL ++D + G+C QTE ++RQ
Sbjct: 84  LINLIDSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQTEALIRQ 130



 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 27/53 (50%), Positives = 40/53 (75%)
 Frame = +3

Query: 99  NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITL 257
           +IRN+ ++AHVDHGK++  DSLVS   +I+   AG+ R+ D+R+DEQ R IT+
Sbjct: 19  HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGITM 71


>U50193-2|AAA91248.1|  974|Caenorhabditis elegans Elongation factor
           protein 1 protein.
          Length = 974

 Score = 65.3 bits (152), Expect = 3e-11
 Identities = 36/87 (41%), Positives = 51/87 (58%)
 Frame = +2

Query: 305 VFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETV 484
           V I   D R KS   +L+N+ID+PGHV+FS E+TA+ R+ DG + +VD   GV + TE  
Sbjct: 189 VSIVAQDSRSKS---YLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEGVMMNTERA 245

Query: 485 LRQAXAERSSLFCS*TKWTVLFLSSNL 565
           +R A  ER ++    +K   L L   L
Sbjct: 246 IRHAIQERLAVTLCISKIDRLLLELKL 272



 Score = 35.5 bits (78), Expect = 0.031
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +3

Query: 81  MMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKA-GIIAGARAGETRFTDTRKDEQDRCITL 257
           +MD    +RN+++  H+ HGK+T  D L+ +       A   + RFTD    E+ R  ++
Sbjct: 125 LMDCPHIMRNVAIAGHLHHGKTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRGCSI 184

Query: 258 NLRP 269
             +P
Sbjct: 185 KSQP 188


>M86958-1|AAA21824.1|  849|Caenorhabditis elegans eft-1 protein.
          Length = 849

 Score = 65.3 bits (152), Expect = 3e-11
 Identities = 36/87 (41%), Positives = 51/87 (58%)
 Frame = +2

Query: 305 VFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETV 484
           V I   D R KS   +L+N+ID+PGHV+FS E+TA+ R+ DG + +VD   GV + TE  
Sbjct: 64  VSIVAQDSRSKS---YLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEGVMMNTERA 120

Query: 485 LRQAXAERSSLFCS*TKWTVLFLSSNL 565
           +R A  ER ++    +K   L L   L
Sbjct: 121 IRHAIQERLAVTLCISKIDRLLLELKL 147



 Score = 34.7 bits (76), Expect = 0.055
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +3

Query: 84  MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKA-GIIAGARAGETRFTDTRKDEQDRCITLN 260
           MD    +RN+++  H+ HGK+T  D L+ +       A   + RFTD    E+ R  ++ 
Sbjct: 1   MDCPHIMRNVAIAGHLHHGKTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRGCSIK 60

Query: 261 LRP 269
            +P
Sbjct: 61  SQP 63


>AC006714-2|AAK29716.2|  689|Caenorhabditis elegans Hypothetical
           protein Y119D3B.14 protein.
          Length = 689

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 29/51 (56%), Positives = 35/51 (68%)
 Frame = +2

Query: 344 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETVLRQA 496
           KG  INLID+PGHVDF  EV   +RV DG + V+D  +GV  QT TV RQ+
Sbjct: 88  KGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAGVQPQTLTVWRQS 138



 Score = 39.1 bits (87), Expect = 0.003
 Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
 Frame = +3

Query: 102 IRNMSVIAHVDHGKSTLTDSLVSKAGII--AGARAGETRFTDTRKDEQDRCITL 257
           +RN+ VIAHVD GK+T+T+ L+  AG I  AG        TD    E++R IT+
Sbjct: 25  LRNIGVIAHVDAGKTTVTERLLYLAGAIHVAGHVDKGNTVTDFLDIERERGITV 78


>Z81519-1|CAB04216.1|  750|Caenorhabditis elegans Hypothetical
           protein F29C12.4 protein.
          Length = 750

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 31/59 (52%), Positives = 36/59 (61%)
 Frame = +2

Query: 347 GFLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETVLRQAXAERSSLFC 523
           G  IN+ID+PGHVDF+ EV  ALRV DGA+ V+  V GV  QT TV RQ         C
Sbjct: 111 GTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCGVGGVQSQTFTVNRQLARYNVPFIC 169



 Score = 32.7 bits (71), Expect = 0.22
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = +3

Query: 102 IRNMSVIAHVDHGKSTLTDSLVSKAGII 185
           IRN+ + AH+D GK+T+T+ ++  AG I
Sbjct: 44  IRNIGISAHIDSGKTTVTERILYYAGRI 71


>L13200-4|AAA28191.2|  645|Caenorhabditis elegans Hypothetical
           protein ZK1236.1 protein.
          Length = 645

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 25/44 (56%), Positives = 33/44 (75%)
 Frame = +2

Query: 344 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQT 475
           +G+L+NLID+PGHVDFS+EV+ +L V DG L +V    GV  QT
Sbjct: 100 RGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQGVQAQT 143



 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 22/52 (42%), Positives = 32/52 (61%)
 Frame = +3

Query: 102 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITL 257
           IRN  ++AHVDHGKSTL D L+   G +     G+ +  D  + E++R IT+
Sbjct: 42  IRNFGIVAHVDHGKSTLADRLLEMCGAVP---PGQKQMLDKLQVERERGITV 90


>D38472-1|BAA07492.1|  495|Caenorhabditis elegans elongation factor
           Tu homologueprecursor protein.
          Length = 495

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +3

Query: 108 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITLN 260
           N+  I HVDHGK+TLT ++        GA+  +    D   +E+ R IT+N
Sbjct: 51  NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITIN 101



 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 365 IDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQT 475
           ID PGH D+   +       +GA+ VV    G   QT
Sbjct: 117 IDCPGHADYIKNMITGAAQMEGAILVVAATDGPMPQT 153


>D38471-1|BAA07491.1|  496|Caenorhabditis elegans elongation factor
           Tu homologueprecursor protein.
          Length = 496

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +3

Query: 108 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITLN 260
           N+  I HVDHGK+TLT ++        GA+  +    D   +E+ R IT+N
Sbjct: 52  NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITIN 102



 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 365 IDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQT 475
           ID PGH D+   +       +GA+ VV    G   QT
Sbjct: 118 IDCPGHADYIKNMITGAAQMEGAILVVAATDGPMPQT 154


>AC024859-25|AAK29979.1|  496|Caenorhabditis elegans Tu elongation
           factor (ef-tu), mitochondrialprotein 1 protein.
          Length = 496

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +3

Query: 108 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITLN 260
           N+  I HVDHGK+TLT ++        GA+  +    D   +E+ R IT+N
Sbjct: 52  NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITIN 102



 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 365 IDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQT 475
           ID PGH D+   +       +GA+ VV    G   QT
Sbjct: 118 IDCPGHADYIKNMITGAAQMEGAILVVAATDGPMPQT 154


>U80437-9|AAN84843.1|  439|Caenorhabditis elegans Tu elongation
           factor (ef-tu), mitochondrialprotein 2 protein.
          Length = 439

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 21/63 (33%), Positives = 33/63 (52%)
 Frame = +3

Query: 108 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITLNLRPSLCSSS 287
           N+  I H+DHGK+TLT ++         A+  +    D  K+E+ R IT+N+      S 
Sbjct: 47  NVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAHIGYESP 106

Query: 288 LKR 296
           L+R
Sbjct: 107 LRR 109



 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 368 DSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTE 478
           D PGH DF   +       D A+ V+    GV  QT+
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVMEQTK 150


>AB010028-1|BAA31345.1|  439|Caenorhabditis elegans mitochondrial
           elongation factorTu homologue protein.
          Length = 439

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 21/63 (33%), Positives = 33/63 (52%)
 Frame = +3

Query: 108 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITLNLRPSLCSSS 287
           N+  I H+DHGK+TLT ++         A+  +    D  K+E+ R IT+N+      S 
Sbjct: 47  NVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAHIGYESP 106

Query: 288 LKR 296
           L+R
Sbjct: 107 LRR 109



 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 368 DSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTE 478
           D PGH DF   +       D A+ V+    GV  QT+
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVMEQTK 150


>Z99709-7|CAB16862.2|  500|Caenorhabditis elegans Hypothetical
           protein C47B2.7b protein.
          Length = 500

 Score = 35.1 bits (77), Expect = 0.041
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = +2

Query: 338 SEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQT 475
           S  G  + LID PGH      V AA  V D A+ ++D V+G+  QT
Sbjct: 68  SLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQT 113



 Score = 27.5 bits (58), Expect = 8.3
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 108 NMSVIAHVDHGKSTLTDSLVSKAGIIA-GARAGETRFTDTRKDEQD 242
           N+ ++ HVD GK+TLT  +       A  A A  T     R++  D
Sbjct: 15  NLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLD 60


>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
           translation initiationfactor eIF5B protein.
          Length = 1074

 Score = 34.3 bits (75), Expect = 0.072
 Identities = 20/43 (46%), Positives = 26/43 (60%)
 Frame = +2

Query: 347 GFLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQT 475
           GFLI  ID+PGH  FS+  T    + D A+ VVD + G+  QT
Sbjct: 550 GFLI--IDTPGHESFSNLRTRGSSLCDFAILVVDIMHGLEPQT 590


>U51994-9|AAO21383.1|  267|Caenorhabditis elegans Elongation factor
           protein 4, isoformc protein.
          Length = 267

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +3

Query: 84  MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 179
           M K++   N+ VI HVD GKST T  L+ K G
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32



 Score = 31.9 bits (69), Expect = 0.39
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 350 FLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSG 460
           + I +ID+PGH DF   +       D A+ VV C +G
Sbjct: 85  YYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTG 121


>U51994-8|AAO21382.1|   77|Caenorhabditis elegans Elongation factor
           protein 4, isoformb protein.
          Length = 77

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +3

Query: 84  MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 179
           M K++   N+ VI HVD GKST T  L+ K G
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32


>U51994-7|AAO21384.1|  429|Caenorhabditis elegans Elongation factor
           protein 4, isoformd protein.
          Length = 429

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +3

Query: 84  MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 179
           M K++   N+ VI HVD GKST T  L+ K G
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32



 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 350 FLINLIDSPGHVDFSSEVTAALRVTDGALXVVDC 451
           + I +ID+PGH DF   +       D A+ VV C
Sbjct: 85  YYITIIDAPGHRDFIKNMITGTSQADCAVLVVAC 118


>U51994-6|AAA96068.1|  463|Caenorhabditis elegans Elongation factor
           protein 4, isoforma protein.
          Length = 463

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +3

Query: 84  MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 179
           M K++   N+ VI HVD GKST T  L+ K G
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32



 Score = 31.9 bits (69), Expect = 0.39
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 350 FLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSG 460
           + I +ID+PGH DF   +       D A+ VV C +G
Sbjct: 85  YYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTG 121


>U40935-2|AAA81688.1|  463|Caenorhabditis elegans Elongation factor
           protein 3 protein.
          Length = 463

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +3

Query: 84  MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 179
           M K++   N+ VI HVD GKST T  L+ K G
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32



 Score = 31.9 bits (69), Expect = 0.39
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 350 FLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSG 460
           + I +ID+PGH DF   +       D A+ VV C +G
Sbjct: 85  YYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTG 121


>AL132862-30|CAB60565.3|  716|Caenorhabditis elegans Hypothetical
           protein Y73F8A.1 protein.
          Length = 716

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
 Frame = +3

Query: 33  HKPSKMVNFTVDEIRGMMDKKRN-IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGET 209
           H P K+     DE+  M ++KRN + N    A+++     + +S+ S    I G  A   
Sbjct: 610 HVPEKVAEDIADEVARMTEQKRNYMENHRDYANLNRRVDQMQESVFSIVDRIEGVNATLQ 669

Query: 210 RFTDTRKDEQDRCITLNLRPSLCSSSLKRKI*YSSQTLTSV 332
                R  +QD    ++L   L +    R+      T+TS+
Sbjct: 670 TIEKQRVQQQDGGNLMDLSALLTNQVRNRESAARRPTITSI 710


>Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical
           protein K07A12.4b protein.
          Length = 592

 Score = 32.3 bits (70), Expect = 0.29
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 356 INLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSG 460
           I L+D+PGH DF S +       D A+ VV+  +G
Sbjct: 250 IVLLDAPGHKDFISNMITGTSQADAAILVVNATTG 284



 Score = 28.3 bits (60), Expect = 4.8
 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 15/82 (18%)
 Frame = +3

Query: 96  RNIRNMSVIAHVDHGKSTLTDSLVSKAGII----------AGARAGETRFT-----DTRK 230
           +++ N+ V+ HVD GKSTL   L+    ++            AR G+  F      D  +
Sbjct: 168 KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETE 227

Query: 231 DEQDRCITLNLRPSLCSSSLKR 296
           +E++R +T+++  +   +S +R
Sbjct: 228 EERERGVTMDIGRTSFETSHRR 249


>Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical
           protein K07A12.4a protein.
          Length = 610

 Score = 32.3 bits (70), Expect = 0.29
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 356 INLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSG 460
           I L+D+PGH DF S +       D A+ VV+  +G
Sbjct: 268 IVLLDAPGHKDFISNMITGTSQADAAILVVNATTG 302



 Score = 28.3 bits (60), Expect = 4.8
 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 15/82 (18%)
 Frame = +3

Query: 96  RNIRNMSVIAHVDHGKSTLTDSLVSKAGII----------AGARAGETRFT-----DTRK 230
           +++ N+ V+ HVD GKSTL   L+    ++            AR G+  F      D  +
Sbjct: 186 KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETE 245

Query: 231 DEQDRCITLNLRPSLCSSSLKR 296
           +E++R +T+++  +   +S +R
Sbjct: 246 EERERGVTMDIGRTSFETSHRR 267


>U39996-6|AAA81092.1|  595|Caenorhabditis elegans Hypothetical
           protein C56E6.5 protein.
          Length = 595

 Score = 31.9 bits (69), Expect = 0.39
 Identities = 21/65 (32%), Positives = 31/65 (47%)
 Frame = +3

Query: 114 SVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITLNLRPSLCSSSLK 293
           +++   D GK+TL ++L S AG   G  A   +F  TR+     C  +N R    SS   
Sbjct: 51  AIVGVADSGKTTLLEALTSGAGGDIGGIAMLDKFMLTRRRFNKFCSHINYRNQYPSSLSV 110

Query: 294 RKI*Y 308
           R + Y
Sbjct: 111 RSLLY 115


>Z70780-15|CAA94822.2|  702|Caenorhabditis elegans Hypothetical
           protein F46B6.6a protein.
          Length = 702

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 16/42 (38%), Positives = 26/42 (61%)
 Frame = +3

Query: 87  DKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 212
           D +R    ++++ HVDHGK+TL D++   + I AG   G T+
Sbjct: 151 DLERRPPIVTIMGHVDHGKTTLLDAM-RNSQIAAGEFGGITQ 191



 Score = 28.7 bits (61), Expect = 3.6
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +2

Query: 344 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETVLRQA 496
           KG  +  +D+PGH  F+S      +  D  + VV    GV  QT   ++ A
Sbjct: 202 KGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKEQTAQSIKFA 252


>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
           than wild-typeprotein 6 protein.
          Length = 1254

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/62 (25%), Positives = 25/62 (40%)
 Frame = -3

Query: 486 STVSVCTHTPDTQSTTXRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVMN 307
           ++  + T   +T STT   P +T +  + +E   T    S+     P  L  RW   V  
Sbjct: 697 ASTGIITTDEETTSTTSTTPEITSTKEIVTESAITQTSVSVVESSTPRQLPERWKAIVNK 756

Query: 306 TK 301
            K
Sbjct: 757 FK 758


>AF000264-4|AAC71125.3|  631|Caenorhabditis elegans Hypothetical
           protein F43E2.3 protein.
          Length = 631

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -3

Query: 456 DTQSTTXRAPSVTRSAAVTSEEKSTCPGESIK 361
           D+ +T  R+P  TRS ++TS +   C G+ I+
Sbjct: 174 DSANTILRSPYSTRSDSITSVDSGQCSGDQIE 205


>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
           protein 1 protein.
          Length = 1852

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -3

Query: 135 DRRGRSQTCCGYSASCPSSHG 73
           DRRGR  TC G    CP   G
Sbjct: 61  DRRGRCMTCAGNLTDCPGHFG 81


>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein (
           C.elegans RNA polymeraseII largest subunit (ama-1 IV)
           gene, complete cds. ).
          Length = 1859

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -3

Query: 135 DRRGRSQTCCGYSASCPSSHG 73
           DRRGR  TC G    CP   G
Sbjct: 61  DRRGRCMTCAGNLTDCPGHFG 81


>Z83225-2|CAB05722.1|  732|Caenorhabditis elegans Hypothetical
           protein F42H11.2 protein.
          Length = 732

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 50  GEFHGRRDPWDDGQEAEYPQHVCDR 124
           GEFHG    WD+  ++EY   + DR
Sbjct: 666 GEFHGTTKSWDNITKSEYGTFLLDR 690


>Z81097-19|CAB03177.1|  732|Caenorhabditis elegans Hypothetical
           protein F42H11.2 protein.
          Length = 732

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 50  GEFHGRRDPWDDGQEAEYPQHVCDR 124
           GEFHG    WD+  ++EY   + DR
Sbjct: 666 GEFHGTTKSWDNITKSEYGTFLLDR 690


>Z82053-8|CAB61018.2|  309|Caenorhabditis elegans Hypothetical
           protein T26E3.3a protein.
          Length = 309

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 245 LHHLKSTAISMFFELEEKDLVFITNPDQREKS 340
           LHHL+S   ++ +     DL+ ITN D   KS
Sbjct: 50  LHHLESVQFTLCYNSTGGDLLPITNDDNLRKS 81


>AF070968-1|AAD15926.1|  309|Caenorhabditis elegans PAR-6 protein.
          Length = 309

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 245 LHHLKSTAISMFFELEEKDLVFITNPDQREKS 340
           LHHL+S   ++ +     DL+ ITN D   KS
Sbjct: 50  LHHLESVQFTLCYNSTGGDLLPITNDDNLRKS 81


>Z99709-6|CAB16863.1|  459|Caenorhabditis elegans Hypothetical
           protein C47B2.7a protein.
          Length = 459

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 108 NMSVIAHVDHGKSTLTDSLVSKAGIIA-GARAGETRFTDTRKDEQD 242
           N+ ++ HVD GK+TLT  +       A  A A  T     R++  D
Sbjct: 15  NLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLD 60


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,448,942
Number of Sequences: 27780
Number of extensions: 262801
Number of successful extensions: 875
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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