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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021012X
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024824-1|AAK85503.1|  679|Caenorhabditis elegans Hypothetical ...    29   1.5  
AC024822-1|AAF59593.1|  117|Caenorhabditis elegans Hypothetical ...    29   2.0  
Z83233-8|CAB05759.2|  378|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p...    29   2.6  
U41510-8|AAK39385.1|  493|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp...    29   2.6  
Z46794-9|CAA86781.1|   99|Caenorhabditis elegans Hypothetical pr...    28   3.4  
U50066-1|AAA93437.2|  378|Caenorhabditis elegans Resistance to i...    28   3.4  
AL132948-25|CAC51048.1|  438|Caenorhabditis elegans Hypothetical...    28   3.4  
AF003139-10|AAB54160.3|  294|Caenorhabditis elegans Hypothetical...    28   3.4  
AC024211-6|AAF36067.2| 1454|Caenorhabditis elegans Hypothetical ...    28   3.4  
Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr...    28   4.6  
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.      28   4.6  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    27   6.0  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    27   6.0  
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical...    27   6.0  
Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical pr...    27   8.0  
Z68011-3|CAA92014.2|  821|Caenorhabditis elegans Hypothetical pr...    27   8.0  
X96762-1|CAA65537.1|  806|Caenorhabditis elegans DNA topoisomera...    27   8.0  
U97006-5|AAC47967.1|  222|Caenorhabditis elegans Hypothetical pr...    27   8.0  
U64599-3|AAB04561.1|  120|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical ...    27   8.0  

>AC024824-1|AAK85503.1|  679|Caenorhabditis elegans Hypothetical
           protein Y55B1BR.3 protein.
          Length = 679

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 21/72 (29%), Positives = 37/72 (51%)
 Frame = +2

Query: 299 ADMLDEGEQQYILNRLSKQPQLLSNIPDTEEQKTKSRKRVKVDKERPMKLKRVTPSSDSC 478
           +D  DE E+    ++ SK+  + S+  D EE+K  S+KR K  K+   + ++ + S +  
Sbjct: 285 SDDEDEEEKPEKRSKKSKKAVIDSSSEDEEEEK-SSKKRSKKSKKESDEEQQASDSEEEV 343

Query: 479 AETDEESGSEWK 514
            E  + S S  K
Sbjct: 344 VEVKKNSKSPKK 355


>AC024822-1|AAF59593.1|  117|Caenorhabditis elegans Hypothetical
           protein Y55B1BL.1 protein.
          Length = 117

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +2

Query: 344 LSKQPQLLSNIPDTEEQKTKSRKRVKVDKERPMKLK-RVTPSSDSCAETDEESGS 505
           L  +P+   N PD E +  +  + V  +K     +K  + P++  C+  DE++ S
Sbjct: 38  LPHRPRCRVNFPDIENELEQQYQYVMNNKNSTRNMKDHLVPNNSKCSSDDEDNSS 92


>Z83233-8|CAB05759.2|  378|Caenorhabditis elegans Hypothetical
           protein K06B4.8 protein.
          Length = 378

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +2

Query: 20  ILKE-SIKLNQNLLKFITYYLLDSKTLIKSLKN 115
           +LKE +IK  +N  KFI YY  +  +L+  LKN
Sbjct: 107 LLKELTIKDGKNYTKFINYYSNEDPSLVDVLKN 139


>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical protein
            K08F8.6 protein.
          Length = 2862

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 12/42 (28%), Positives = 25/42 (59%)
 Frame = +3

Query: 162  HTTNKMRKQGQLKLQRHRTKVQKQNHPQSKPKRITAARVSRL 287
            H    +++Q Q ++Q HR ++Q QN   S+P +   A++ ++
Sbjct: 1413 HQQQMVQQQQQQQMQMHRQQMQMQNQNMSQPFQPPTAQMLQM 1454


>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical protein
            T01H10.8 protein.
          Length = 2692

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 323  QQYILNR-LSKQPQLLSNIPDTEEQKTKSRKRV 418
            ++Y L R LS+QP L  N  D+EE++  +R+R+
Sbjct: 1168 EEYALERELSRQPILRLNGDDSEEEEEVTRRRI 1200


>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical protein
            T01H10.8 protein.
          Length = 2692

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 323  QQYILNR-LSKQPQLLSNIPDTEEQKTKSRKRV 418
            ++Y L R LS+QP L  N  D+EE++  +R+R+
Sbjct: 1168 EEYALERELSRQPILRLNGDDSEEEEEVTRRRI 1200


>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
            protein K08F8.6 protein.
          Length = 2862

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 12/42 (28%), Positives = 25/42 (59%)
 Frame = +3

Query: 162  HTTNKMRKQGQLKLQRHRTKVQKQNHPQSKPKRITAARVSRL 287
            H    +++Q Q ++Q HR ++Q QN   S+P +   A++ ++
Sbjct: 1413 HQQQMVQQQQQQQMQMHRQQMQMQNQNMSQPFQPPTAQMLQM 1454


>U41510-8|AAK39385.1|  493|Caenorhabditis elegans Hypothetical
           protein ZC449.5 protein.
          Length = 493

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +2

Query: 383 TEEQKTKSRKRVKVDKER-PMKLKRV-TPSSDSCAETDEESGS 505
           +E++KT+S+K VK      P +     TPSS+    T+EESG+
Sbjct: 118 SEKKKTESKKAVKTTTTAAPAESAETETPSSEENKTTEEESGN 160


>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
            subunit Med13 protein.
          Length = 2862

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 12/42 (28%), Positives = 25/42 (59%)
 Frame = +3

Query: 162  HTTNKMRKQGQLKLQRHRTKVQKQNHPQSKPKRITAARVSRL 287
            H    +++Q Q ++Q HR ++Q QN   S+P +   A++ ++
Sbjct: 1413 HQQQMVQQQQQQQMQMHRQQMQMQNQNMSQPFQPPTAQMLQM 1454


>Z46794-9|CAA86781.1|   99|Caenorhabditis elegans Hypothetical
           protein R06F6.11 protein.
          Length = 99

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +2

Query: 299 ADMLDEGEQQYILNRLSKQPQLLSNIPDTEEQKTKSRKRVKVDKERPMKLKRVTPS 466
           A + DEGEQQ  L  +S Q +   N+    E  +     +K  +E+ M      P+
Sbjct: 43  AGLADEGEQQLQLVDVSPQDEGQQNVAHVREMFSNVFNSIKTQREQAMAANGSQPT 98


>U50066-1|AAA93437.2|  378|Caenorhabditis elegans Resistance to
           inhibitors of cholinesteraseprotein 3 protein.
          Length = 378

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 425 DKERPMKLKRVTPSSDSCAETDEESGSE 508
           DK +  KLKR   SSD   E +EE+ SE
Sbjct: 267 DKAKMKKLKRKDSSSDEDEEDEEENSSE 294


>AL132948-25|CAC51048.1|  438|Caenorhabditis elegans Hypothetical
           protein Y39B6A.33 protein.
          Length = 438

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 383 TEEQKTKSRKRVKVDKERPMKLKRVTPSSDS 475
           T+EQK K  K  K+DKE   +L+      DS
Sbjct: 286 TKEQKKKKAKAQKLDKEEKRRLEEKAKEQDS 316


>AF003139-10|AAB54160.3|  294|Caenorhabditis elegans Hypothetical
           protein F53G12.4 protein.
          Length = 294

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +2

Query: 335 LNRLSKQPQLLSNIPDTEEQKTKS-RKRVKVDKERPMKLKRVT--PSSDSCAETDEESGS 505
           +N + KQ   L   P ++E+  K+ RKR+++++ER  +L       S DS + +D  + S
Sbjct: 77  INMVDKQRAPLKITPLSDEEFRKTMRKRMEMERERLARLSNQAEDDSDDSSSSSDSSTSS 136


>AC024211-6|AAF36067.2| 1454|Caenorhabditis elegans Hypothetical
           protein Y76B12C.7 protein.
          Length = 1454

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 308 LDEGEQQYILNRLSKQPQLLSNIPDTEEQKTKSRKRVKVDKE 433
           L E E  Y + R S  P+LL ++   EE+K +  K  +  KE
Sbjct: 790 LPEMEVVYQIGRFSNVPELLVDLTVEEEEKERKAKAQQAAKE 831


>Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical
           protein F57C7.1b protein.
          Length = 1087

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +2

Query: 347 SKQPQLLSNIPDTEEQKTKSRKRVKVDKERPMKLKRVTPSSDSCAETDEES 499
           S QP++++  P     +  S+KR   + E  + +K  TP++   A   EE+
Sbjct: 480 SVQPEVVNEEPKPSTSQPPSKKRKAENGEPAVAVKIATPATPVAAHPQEET 530


>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical
           protein F57C7.1a protein.
          Length = 1209

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +2

Query: 347 SKQPQLLSNIPDTEEQKTKSRKRVKVDKERPMKLKRVTPSSDSCAETDEES 499
           S QP++++  P     +  S+KR   + E  + +K  TP++   A   EE+
Sbjct: 480 SVQPEVVNEEPKPSTSQPPSKKRKAENGEPAVAVKIATPATPVAAHPQEET 530


>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
            C52A11.4f protein.
          Length = 2371

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 347  SKQPQLLSNIPDTEEQKTKSRKRVKVDKERP 439
            SK+ +  S+ PD + + T  R+ + V++E+P
Sbjct: 1594 SKEEEATSSSPDIQRENTVKRRSMDVEREQP 1624


>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
            C52A11.4a protein.
          Length = 2393

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 347  SKQPQLLSNIPDTEEQKTKSRKRVKVDKERP 439
            SK+ +  S+ PD + + T  R+ + V++E+P
Sbjct: 1616 SKEEEATSSSPDIQRENTVKRRSMDVEREQP 1646


>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
            C52A11.4e protein.
          Length = 2184

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 347  SKQPQLLSNIPDTEEQKTKSRKRVKVDKERP 439
            SK+ +  S+ PD + + T  R+ + V++E+P
Sbjct: 1407 SKEEEATSSSPDIQRENTVKRRSMDVEREQP 1437


>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
            C52A11.4d protein.
          Length = 2491

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 347  SKQPQLLSNIPDTEEQKTKSRKRVKVDKERP 439
            SK+ +  S+ PD + + T  R+ + V++E+P
Sbjct: 1714 SKEEEATSSSPDIQRENTVKRRSMDVEREQP 1744


>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
            C52A11.4f protein.
          Length = 2371

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 347  SKQPQLLSNIPDTEEQKTKSRKRVKVDKERP 439
            SK+ +  S+ PD + + T  R+ + V++E+P
Sbjct: 1594 SKEEEATSSSPDIQRENTVKRRSMDVEREQP 1624


>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
            C52A11.4a protein.
          Length = 2393

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 347  SKQPQLLSNIPDTEEQKTKSRKRVKVDKERP 439
            SK+ +  S+ PD + + T  R+ + V++E+P
Sbjct: 1616 SKEEEATSSSPDIQRENTVKRRSMDVEREQP 1646


>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
            C52A11.4e protein.
          Length = 2184

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 347  SKQPQLLSNIPDTEEQKTKSRKRVKVDKERP 439
            SK+ +  S+ PD + + T  R+ + V++E+P
Sbjct: 1407 SKEEEATSSSPDIQRENTVKRRSMDVEREQP 1437


>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
            C52A11.4d protein.
          Length = 2491

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 347  SKQPQLLSNIPDTEEQKTKSRKRVKVDKERP 439
            SK+ +  S+ PD + + T  R+ + V++E+P
Sbjct: 1714 SKEEEATSSSPDIQRENTVKRRSMDVEREQP 1744


>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
            C52A11.4c protein.
          Length = 2202

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 347  SKQPQLLSNIPDTEEQKTKSRKRVKVDKERP 439
            SK+ +  S+ PD + + T  R+ + V++E+P
Sbjct: 1425 SKEEEATSSSPDIQRENTVKRRSMDVEREQP 1455


>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
          Length = 2166

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 347  SKQPQLLSNIPDTEEQKTKSRKRVKVDKERP 439
            SK+ +  S+ PD + + T  R+ + V++E+P
Sbjct: 1385 SKEEEATSSSPDIQRENTVKRRSMDVEREQP 1415


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
           protein Y57A10A.18b protein.
          Length = 1459

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = -3

Query: 340 VQDVLLLALVEHISPHLARRLTLAAVIRLGLDWGWFCFCTF 218
           + D+ +++   ++ PH ARR T     +   DWG+ CF T+
Sbjct: 244 IADMRMISYKPNV-PHFARRTTHTYTSKEN-DWGYSCFMTW 282


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
           protein Y57A10A.18a protein.
          Length = 1456

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = -3

Query: 340 VQDVLLLALVEHISPHLARRLTLAAVIRLGLDWGWFCFCTF 218
           + D+ +++   ++ PH ARR T     +   DWG+ CF T+
Sbjct: 244 IADMRMISYKPNV-PHFARRTTHTYTSKEN-DWGYSCFMTW 282


>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
            protein F15E6.1 protein.
          Length = 1655

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = +2

Query: 320  EQQYILNRLSKQPQLLSNIPDTEEQKTKSRKRVKVDKERPMKLKRVTPSSDSCAETDEES 499
            EQ+ ILNRL    +      +  EQK KS +     K  PM L++  P+    A+ ++ S
Sbjct: 878  EQERILNRLRAAARKQKRKSEPVEQKQKSSQPSTSRKSAPMALQQ--PAEPRVAQLNDYS 935


>Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical
           protein F28C1.1 protein.
          Length = 672

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
 Frame = +2

Query: 350 KQPQLLSNIPDTEEQKTK---SRKRVKVDKERPMKLKRVTPSSDSCAETDEESGSEWK 514
           K  ++ S++ D+E++K +    ++RVK+ K + +K KR   S+D  ++ D +   +WK
Sbjct: 548 KMLEIRSSMSDSEKEKAEIENRKRRVKLTK-KLIKEKRGQTSNDRSSDED-DGEQQWK 603


>Z68011-3|CAA92014.2|  821|Caenorhabditis elegans Hypothetical
           protein T21B6.3 protein.
          Length = 821

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = +3

Query: 174 KMRKQGQLKLQRHRTKVQKQNHPQSKPKRIT 266
           + R+Q Q + Q+ + + Q+Q +PQ +P++ T
Sbjct: 293 RQREQQQQQQQQQQQQQQRQQNPQQQPQQTT 323


>X96762-1|CAA65537.1|  806|Caenorhabditis elegans DNA topoisomerase
           protein.
          Length = 806

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = +2

Query: 380 DTEEQKTKS---RKRVKVDKERPMKLKRVTPSSDSCAETDEESGSE 508
           D EEQK K    RK+ K +K++  + KR+   +    E D+E   +
Sbjct: 151 DEEEQKRKEKERRKKEKREKKKRKEKKRLEKENRKIKEEDDEDSDD 196


>U97006-5|AAC47967.1|  222|Caenorhabditis elegans Hypothetical
           protein C13F10.7 protein.
          Length = 222

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +2

Query: 335 LNRLSKQPQLLSNIPDTEEQKTKSRKRVKVDKERPMKLKRVTPSSDSCAETDEE 496
           L +  K+ + L      E++K K  ++ +  KER  K +R   S DS    +EE
Sbjct: 125 LEKQRKKEKKLKKKAKKEKKKAKKLEKKERKKERKEKRRRRDDSDDSSDSDEEE 178


>U64599-3|AAB04561.1|  120|Caenorhabditis elegans Hypothetical
           protein F56B6.6 protein.
          Length = 120

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
 Frame = -1

Query: 435 RSLSTFTLFRDLVF-CSSVSGMLDKSCG---CLESL--FKMYCCSPSSSISA 298
           R+LSTF LF  LVF  SS +   D  CG   C+  +      CC P    +A
Sbjct: 3   RTLSTFLLFSVLVFKASSGACSSDSDCGGAPCVMDVKAGSHVCCKPKPGTTA 54


>AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical
           protein F55A3.3 protein.
          Length = 1030

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 358 WLFGKPVQDVLLLALVEHI 302
           WLFG  + D +LL L +HI
Sbjct: 57  WLFGHEIADTVLLLLKDHI 75


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,731,857
Number of Sequences: 27780
Number of extensions: 172704
Number of successful extensions: 802
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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