Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0001
(367 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF023454-1|AAB82794.1| 707|Caenorhabditis elegans protein phosp... 29 1.0
AF003389-11|AAC71139.2| 707|Caenorhabditis elegans Phosphatase ... 29 1.0
Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical pr... 28 2.4
AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related n... 28 2.4
Z83239-10|CAB05812.2| 324|Caenorhabditis elegans Hypothetical p... 27 5.4
Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical pr... 27 5.4
AL032663-12|CAA21768.2| 324|Caenorhabditis elegans Hypothetical... 27 5.4
AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transport... 27 5.4
Z49969-3|CAA90267.1| 792|Caenorhabditis elegans Hypothetical pr... 26 9.5
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 26 9.5
>AF023454-1|AAB82794.1| 707|Caenorhabditis elegans protein
phosphatase with EF-hands protein.
Length = 707
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 118 KQHASGEWSQSTNILKRTGSSSARRKLHNSNSWMSRQTSHRPPRLSSGASYISAWITKSN 297
+Q+ S E +ST T SSS R +++N S + ++ SS + S KSN
Sbjct: 9 RQNPSTELKKSTRATTTTTSSSQRNNYNDNNQNTSSSSGNKKESSSSSKQHSSKKSKKSN 68
Query: 298 YRQ 306
++
Sbjct: 69 SKK 71
>AF003389-11|AAC71139.2| 707|Caenorhabditis elegans Phosphatase
with ef hands protein1, isoform a protein.
Length = 707
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 118 KQHASGEWSQSTNILKRTGSSSARRKLHNSNSWMSRQTSHRPPRLSSGASYISAWITKSN 297
+Q+ S E +ST T SSS R +++N S + ++ SS + S KSN
Sbjct: 9 RQNPSTELKKSTRATTTTTSSSQRNNYNDNNQNTSSSSGNKKESSSSSKQHSSKKSKKSN 68
Query: 298 YRQ 306
++
Sbjct: 69 SKK 71
>Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical
protein C01C7.1 protein.
Length = 1043
Score = 27.9 bits (59), Expect = 2.4
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +1
Query: 178 SSARRKLHNSNSWMSRQTSHRPPRLSSGASYISAWITKSNYRQIS*RYSTGHKK 339
S R L + N +S T+H+PP SS A ++T+ R+I+ + + H+K
Sbjct: 750 SEDRPLLDSMNRTISSSTTHQPPPQSSEARI--RFMTEQEVRKINEKSAREHRK 801
>AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related
non-receptor tyrosinekinase protein.
Length = 1043
Score = 27.9 bits (59), Expect = 2.4
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +1
Query: 178 SSARRKLHNSNSWMSRQTSHRPPRLSSGASYISAWITKSNYRQIS*RYSTGHKK 339
S R L + N +S T+H+PP SS A ++T+ R+I+ + + H+K
Sbjct: 750 SEDRPLLDSMNRTISSSTTHQPPPQSSEARI--RFMTEQEVRKINEKSAREHRK 801
>Z83239-10|CAB05812.2| 324|Caenorhabditis elegans Hypothetical
protein T09F5.11 protein.
Length = 324
Score = 26.6 bits (56), Expect = 5.4
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -2
Query: 135 ATCMLFVLRVSVAPFSTVTVEFSVLFLCSCTASMSVQCLVS 13
ATC +++ +A F TV F + C ++ C+VS
Sbjct: 60 ATCRFKEIKIEIASFYNPTVSFHLDDACITYETVGQSCIVS 100
>Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical
protein C34C6.4 protein.
Length = 599
Score = 26.6 bits (56), Expect = 5.4
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 118 KQHASGEWSQSTNILKRTGSSSARRKLHNSNSWMSRQTSHRPPR 249
K+H G W+ N K+ G S+ +HN W + + P R
Sbjct: 202 KEHPLG-WTNDMNGEKQEGISTMDMTIHNGERWSASKAYVHPIR 244
>AL032663-12|CAA21768.2| 324|Caenorhabditis elegans Hypothetical
protein T09F5.11 protein.
Length = 324
Score = 26.6 bits (56), Expect = 5.4
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -2
Query: 135 ATCMLFVLRVSVAPFSTVTVEFSVLFLCSCTASMSVQCLVS 13
ATC +++ +A F TV F + C ++ C+VS
Sbjct: 60 ATCRFKEIKIEIASFYNPTVSFHLDDACITYETVGQSCIVS 100
>AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transporter
family protein 4 protein.
Length = 1802
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +1
Query: 250 LSSGASYISAWITKSNYRQ 306
+SSG +Y++ W K+N+R+
Sbjct: 1501 ISSGDAYVNGWSVKNNWRE 1519
>Z49969-3|CAA90267.1| 792|Caenorhabditis elegans Hypothetical
protein W01C9.3 protein.
Length = 792
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 28 NRHGRGTGTQKQYGKLNGYS*ERCYRYP*NKQHAS 132
N++ +G Q+QYG NG S + +YP Q+ S
Sbjct: 489 NQNPQGAQQQQQYGNGNGQSPFQNTQYPNQNQNPS 523
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 186 PQKVTQQQFLDVTSNFASPPAA*QRSLLYQCLD 284
P+KV +QF D T +AS P + L LD
Sbjct: 100 PEKVACKQFADDTKLYASTPKTESENNLQSALD 132
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,653,381
Number of Sequences: 27780
Number of extensions: 168239
Number of successful extensions: 453
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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