Silkworm BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_A05
         (840 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical pr...    29   4.1  
AL031632-4|CAA21007.1|  451|Caenorhabditis elegans Hypothetical ...    29   4.1  
AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA...    29   4.1  
Z68012-1|CAA92016.1|  304|Caenorhabditis elegans Hypothetical pr...    29   5.4  
AC084197-23|AAM44389.1|  610|Caenorhabditis elegans Hypothetical...    28   7.2  
Z74041-9|CAA98523.2|  801|Caenorhabditis elegans Hypothetical pr...    28   9.5  
Z74035-5|CAA98485.2|  801|Caenorhabditis elegans Hypothetical pr...    28   9.5  
Z69360-1|CAA93283.1|  390|Caenorhabditis elegans Hypothetical pr...    28   9.5  
AC087079-18|AAK27867.2|  830|Caenorhabditis elegans Hypothetical...    28   9.5  

>Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical protein
            C38C10.5b protein.
          Length = 1374

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 553  QWHPPRVWYSFHH*VLKQMNPPR 485
            QW+PP V  S+HH +  Q  PP+
Sbjct: 1352 QWNPPSVGQSYHHPLHHQQYPPQ 1374


>Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical protein
            C38C10.5a protein.
          Length = 1368

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 553  QWHPPRVWYSFHH*VLKQMNPPR 485
            QW+PP V  S+HH +  Q  PP+
Sbjct: 1346 QWNPPSVGQSYHHPLHHQQYPPQ 1368


>Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical protein
            C38C10.5b protein.
          Length = 1374

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 553  QWHPPRVWYSFHH*VLKQMNPPR 485
            QW+PP V  S+HH +  Q  PP+
Sbjct: 1352 QWNPPSVGQSYHHPLHHQQYPPQ 1374


>Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical protein
            C38C10.5a protein.
          Length = 1368

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 553  QWHPPRVWYSFHH*VLKQMNPPR 485
            QW+PP V  S+HH +  Q  PP+
Sbjct: 1346 QWNPPSVGQSYHHPLHHQQYPPQ 1368


>Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical
           protein W06D12.3 protein.
          Length = 333

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +1

Query: 592 GARLCSMYDSVAQPEESVFRECLLERCSVEENKIISGL 705
           GA +  +YD    PEE + R+C    C  E  K++  L
Sbjct: 295 GASIGMVYDRKTTPEEVIQRQCKKFGCETEREKMLHKL 332


>AL031632-4|CAA21007.1|  451|Caenorhabditis elegans Hypothetical
           protein Y32B12B.5 protein.
          Length = 451

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = +2

Query: 473 PCVVPWWIHLLQH 511
           PC++P W+H++QH
Sbjct: 124 PCIMPLWLHVIQH 136


>AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA
           fatty acid desaturaseFAT-5 protein.
          Length = 333

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +1

Query: 592 GARLCSMYDSVAQPEESVFRECLLERCSVEENKIISGL 705
           GA +  +YD    PEE + R+C    C  E  K++  L
Sbjct: 295 GASIGMVYDRKTTPEEVIQRQCKKFGCETEREKMLHKL 332


>Z68012-1|CAA92016.1|  304|Caenorhabditis elegans Hypothetical
           protein T24D5.1 protein.
          Length = 304

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
 Frame = +2

Query: 164 LRQFQTN-QRWILLNRSYQQMLKNGTLQITLLKRYPLTTLNLPHIDHLAPLYKVDFVKLK 340
           LR F T  +R + L +S  ++L +  + I  L+   L  L   + DH   LY +   K+K
Sbjct: 209 LRAFSTEVKRRVYLEKS--EVLDDQPIAIEFLE-LRLGQLLDGNDDHAVTLYTLMSNKIK 265

Query: 341 IKIHTIWMTCLIHLK 385
           I++ T+ ++ ++HL+
Sbjct: 266 IELDTVLLSLILHLE 280


>AC084197-23|AAM44389.1|  610|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.33 protein.
          Length = 610

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 19/45 (42%), Positives = 21/45 (46%)
 Frame = +1

Query: 169 AVSDEPKVDTSKSKLSADAKEWYPANYTSQALPAYNTEPAPYRPS 303
           A S  P  D S S     A  W  A Y SQA  AY+ EPA   P+
Sbjct: 507 AASTGPSYDQS-SAAGGYAASW-DAYYASQAQSAYSAEPASTYPT 549


>Z74041-9|CAA98523.2|  801|Caenorhabditis elegans Hypothetical
           protein F47G9.3 protein.
          Length = 801

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +1

Query: 607 SMYDSVAQPEESVFRECLLERCSVEE 684
           S+Y S + P+ES+  EC LE+C++ E
Sbjct: 272 SLYISYSNPDESLKSEC-LEKCTMSE 296


>Z74035-5|CAA98485.2|  801|Caenorhabditis elegans Hypothetical
           protein F47G9.3 protein.
          Length = 801

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +1

Query: 607 SMYDSVAQPEESVFRECLLERCSVEE 684
           S+Y S + P+ES+  EC LE+C++ E
Sbjct: 272 SLYISYSNPDESLKSEC-LEKCTMSE 296


>Z69360-1|CAA93283.1|  390|Caenorhabditis elegans Hypothetical
           protein F25H8.2 protein.
          Length = 390

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +1

Query: 220 DAKEWYPANYTSQALPAY--NTEPAPYRPSRPSVQGRLRQAQDQNPY 354
           D +      +++Q  PA   N  P P +PS P    R  Q+ + NPY
Sbjct: 329 DRRGGQKVRFSAQNPPARSDNLGPIPQQPSAPPPPARPAQSTESNPY 375


>AC087079-18|AAK27867.2|  830|Caenorhabditis elegans Hypothetical
           protein Y37E3.17a protein.
          Length = 830

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -3

Query: 178 LKLP*AAGARVP-GCSFATPGLVLLEH*YHRY 86
           L L  A+G   P G SF +PGLV   H  HRY
Sbjct: 55  LLLERASGVASPSGTSFHSPGLVSASHPAHRY 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,011,447
Number of Sequences: 27780
Number of extensions: 421070
Number of successful extensions: 1228
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)