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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_A17
         (896 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical pr...    57   2e-08
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ...    43   3e-04
AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical ...    40   0.003
AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical ...    39   0.004
AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical ...    38   0.007
Z83219-3|CAD57687.1|  965|Caenorhabditis elegans Hypothetical pr...    33   0.28 
U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical pr...    32   0.48 
U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical pr...    32   0.64 
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical...    31   1.5  
Z74026-2|CAD54122.1|  588|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr...    29   6.0  
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll...    29   6.0  
Z81553-9|CAB04500.2|  663|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AC024812-3|AAF59551.1|  183|Caenorhabditis elegans Hypothetical ...    28   7.9  

>U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical
           protein F31A9.6 protein.
          Length = 358

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 2/239 (0%)
 Frame = +1

Query: 10  LVLIIRDYLSNRSFLISSRGNAFPAPXTSQPESRKAPPSPRLLFSLYINDIPRSPETHLA 189
           L++ + ++LSNRSF +            +    + A  SP LLF +Y+NDI       +A
Sbjct: 46  LLIWVNEFLSNRSFRVRIGQTLSSRKFATCGVPQGAVLSP-LLFGIYVNDISSILPEKVA 104

Query: 190 L--FADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNT 363
              FADDT +Y S   K      LQ+A   +  W +  ++ +N +K              
Sbjct: 105 CKQFADDTKLYAS-TPKTESENNLQSALDAVVDWTKGSKLTLNQSK-------------- 149

Query: 364 TLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAF 543
           T+ + +  RR++          +   PI      + LG  +  ++ F  H +   + A F
Sbjct: 150 TVHVTVGKRRID------FKYHLDGYPIERKAITRDLGFLISEKLDFSDHWRKCINLAKF 203

Query: 544 ILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMIYASVVFAHAARIHLKSFQIIQSRFCR 720
            L  ++      +K  +   + LYKT IRP + Y +VV +   +   K+ + +Q+ F R
Sbjct: 204 QLANMFNKYSTSNKKLM---ILLYKTFIRPRLEYGTVVSSPTKKSDEKTIESVQNAFTR 259


>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
            protein F21E9.1 protein.
          Length = 1170

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 5/218 (2%)
 Frame = +1

Query: 25   RDYLSNRSFLISSRGNAFPAPXTSQPESRKAPP---SPRLLFSLYIND--IPRSPETHLA 189
            +++L NR+F  S + N F +   S P S   P    S  LLF L+IN+  I  +P  +++
Sbjct: 854  KEFLENRTF--SVKINKFVSK-NSYPISSGVPQGSVSGPLLFILFINNLLIDLAPTINIS 910

Query: 190  LFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTL 369
             FADD  I+++          +Q +   +  W +   + + PTKS               
Sbjct: 911  CFADDVKIFHTDPTI------IQNSIDIIVSWSKLNELPLAPTKSAL------------- 951

Query: 370  SIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFIL 549
             + L TR  N      +  ++   PI  +  V+ LG+  D ++ F  HI  V   +   +
Sbjct: 952  -LALGTRNKN------QSYSVDGVPITPSSTVRDLGLITDCKLKFEHHIVKV---SCLAM 1001

Query: 550  GRLYPMICRRSKMSLRNKVTLYKTCIRPVMIYASVVFA 663
             R   ++   S  S +    LYKT + P+M Y S V+A
Sbjct: 1002 LRSKQILKAFSSNSPKFYAHLYKTYVAPIMNYCSEVYA 1039


>AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical
           protein C44B12.7 protein.
          Length = 389

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 59/238 (24%), Positives = 96/238 (40%), Gaps = 26/238 (10%)
 Frame = +1

Query: 28  DYLSNRSFLISSRGNAFPAPXTSQPESRKAPPSPRLLFSLYINDIPRS--PETHLALFAD 201
           D+LS+R+F +    +  P          K   S   LF ++IN +  S  P    + FAD
Sbjct: 31  DFLSSRTFSVKVNNHIDPNIHPISSGVPKGSVSGPFLFLIFINSLLLSVPPSISCSAFAD 90

Query: 202 DTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSI-P 378
           D  +Y       L+    QT    +  W    ++ +   K+ A+L K G   N  L + P
Sbjct: 91  DLKVY--SHSPPLI----QTTIDLITTWSENNKLPLAVHKA-ALLNKLGFSSNCVLLLAP 143

Query: 379 LPTRRVNNPAPAVR--------------------PITMFD-QPIPWAPK--VKYLGVTLD 489
           L    V     A R                    P T++    +P +P    + LG+  D
Sbjct: 144 LINSLVCRLLAASRTGVSTVAHSKTCLLHLGKKNPKTVYKINNLPISPSNIARDLGILTD 203

Query: 490 SRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMIYASVVFA 663
           S++TF+PHIK +    +  L R   ++     +       L+KT I P++ Y S V++
Sbjct: 204 SKLTFKPHIKKI---VSLALLRCKQLLKSFKSLCPEFYCNLFKTYILPLIEYGSAVYS 258


>AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical
           protein R11E3.3 protein.
          Length = 931

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 31/127 (24%), Positives = 53/127 (41%)
 Frame = +1

Query: 136 LFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINP 315
           LF+ Y+ D+P   +T L  +ADD +I    +K      ++Q     + ++ ++  + I+ 
Sbjct: 543 LFTFYLKDMPTQQDTMLISYADDMSIIARDKKIEKAAEKVQLHIDEIAKYLKERGMSISA 602

Query: 316 TKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSR 495
            KST  +F              P      P      I   D PIP     K LG+TL++ 
Sbjct: 603 EKSTVTVFSCD-----------PKEHKTKP-----DIYWMDDPIPVINAPKLLGITLNTM 646

Query: 496 MTFRPHI 516
              + H+
Sbjct: 647 TGTKDHV 653


>AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical
           protein K09H9.4 protein.
          Length = 328

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 25/93 (26%), Positives = 43/93 (46%)
 Frame = +1

Query: 442 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKT 621
           PI      + LG  +  ++ F  H K   + A F L  ++      +K  +   + LYKT
Sbjct: 140 PIERKTITRDLGFLISEKLDFSEHWKKSINLAKFQLANIFNQYSTSNKKLM---ILLYKT 196

Query: 622 CIRPVMIYASVVFAHAARIHLKSFQIIQSRFCR 720
            IRP + Y +VV +   +   K+ + +Q+ F R
Sbjct: 197 FIRPRLEYGTVVSSPTKKSDEKAIESVQNAFTR 229


>Z83219-3|CAD57687.1|  965|Caenorhabditis elegans Hypothetical
           protein C31C9.6 protein.
          Length = 965

 Score = 33.1 bits (72), Expect = 0.28
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +1

Query: 322 STAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAP 459
           ST   +    PP T    P P  R+ NP+P+ +P  +   P P  P
Sbjct: 449 STGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 494


>U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical
           protein B0280.13 protein.
          Length = 616

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +1

Query: 322 STAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAP 459
           ST   +    PP T    P P  R+ NP+P+ +P  +   P P  P
Sbjct: 456 STGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501


>U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical protein
            M02E1.1a protein.
          Length = 1077

 Score = 31.9 bits (69), Expect = 0.64
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = +1

Query: 367  LSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRA 537
            ++ PLP+     P   VRP T FD  IP+     ++G     + T    +   R RA
Sbjct: 890  MATPLPSFN-GRPPSVVRPRTAFDMNIPYGTDSNFIGAKQFKKNTLSVEMTNARQRA 945


>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
           protein Y75B8A.13 protein.
          Length = 1420

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +1

Query: 340 KRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAP 459
           K  +PP   + +PLP RR +   P V P  +   P P  P
Sbjct: 233 KTTKPPQHLIILPLPPRRASPAPPRVIPHVIMQPPRPRPP 272


>Z74026-2|CAD54122.1|  588|Caenorhabditis elegans Hypothetical
           protein B0240.4 protein.
          Length = 588

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 382 PTRRVNNPAPAVRPITMFDQPIPW 453
           P R V++P    +PIT+FDQ + W
Sbjct: 46  PNRTVSSPRVQQKPITIFDQIVDW 69


>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
            K04H4.1b protein.
          Length = 1502

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 741  PRGSDGYPAKTGLNNLKG 688
            PRG DG+P + GL+ L G
Sbjct: 1153 PRGDDGFPGRDGLDGLPG 1170


>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
            K04H4.1a protein.
          Length = 1759

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 741  PRGSDGYPAKTGLNNLKG 688
            PRG DG+P + GL+ L G
Sbjct: 1410 PRGDDGFPGRDGLDGLPG 1427


>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
            protein.
          Length = 1758

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 741  PRGSDGYPAKTGLNNLKG 688
            PRG DG+P + GL+ L G
Sbjct: 1409 PRGDDGFPGRDGLDGLPG 1426


>Z81553-9|CAB04500.2|  663|Caenorhabditis elegans Hypothetical
           protein F56H6.11 protein.
          Length = 663

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -1

Query: 398 LTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRNHCPM 273
           LT  VG G+L ++    PLL +  + ++G +S   +  H P+
Sbjct: 275 LTATVGTGLLMLLSENNPLLSNKVLTYIGDISYSLYLVHWPI 316


>AC024812-3|AAF59551.1|  183|Caenorhabditis elegans Hypothetical
           protein Y54E10BR.5 protein.
          Length = 183

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = -1

Query: 428 VIGRTAGAGLLTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRN 285
           V+GRT G  LL  +   GM++++    P LK   + F+GL  + H  N
Sbjct: 141 VVGRTKG--LLPYV---GMVTIIMNDYPKLKYAVLAFLGLFVLLHKEN 183


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,042,945
Number of Sequences: 27780
Number of extensions: 454198
Number of successful extensions: 1566
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1565
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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