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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20018
         (688 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    24   1.6  
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    24   1.6  
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    24   1.6  
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    24   1.6  
EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholi...    24   1.6  
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    24   1.6  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    24   1.6  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    24   1.6  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        23   2.1  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    21   8.3  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   8.3  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   8.3  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   8.3  

>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +2

Query: 479 PVSLGRSCRLAMLKAFISELPESILTQELHGQFEQATAIAEPQREATMTNLIIS 640
           P+S GR    A ++   + LP S + +ELH   ++   I +  ++A  ++ IIS
Sbjct: 373 PISTGRP---ATVEDTSASLPLSGMQEELHTILKELRFITDRMKKADESDEIIS 423


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +2

Query: 479 PVSLGRSCRLAMLKAFISELPESILTQELHGQFEQATAIAEPQREATMTNLIIS 640
           P+S GR    A ++   + LP S + +ELH   ++   I +  ++A  ++ IIS
Sbjct: 373 PISTGRP---ATVEDTSASLPLSGMQEELHTILKELRFITDRMKKADESDEIIS 423


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +2

Query: 479 PVSLGRSCRLAMLKAFISELPESILTQELHGQFEQATAIAEPQREATMTNLIIS 640
           P+S GR    A ++   + LP S + +ELH   ++   I +  ++A  ++ IIS
Sbjct: 373 PISTGRP---ATVEDTSASLPLSGMQEELHTILKELRFITDRMKKADESDEIIS 423


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +2

Query: 479 PVSLGRSCRLAMLKAFISELPESILTQELHGQFEQATAIAEPQREATMTNLIIS 640
           P+S GR    A ++   + LP S + +ELH   ++   I +  ++A  ++ IIS
Sbjct: 373 PISTGRP---ATVEDTSASLPLSGMQEELHTILKELRFITDRMKKADESDEIIS 423


>EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 2 protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +2

Query: 479 PVSLGRSCRLAMLKAFISELPESILTQELHGQFEQATAIAEPQREATMTNLIIS 640
           P+S GR    A ++   + LP S + +ELH   ++   I +  ++A  ++ IIS
Sbjct: 373 PISTGRP---ATVEDTSASLPLSGMQEELHTILKELRFITDRMKKADESDEIIS 423


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +2

Query: 479 PVSLGRSCRLAMLKAFISELPESILTQELHGQFEQATAIAEPQREATMTNLIIS 640
           P+S GR    A ++   + LP S + +ELH   ++   I +  ++A  ++ IIS
Sbjct: 373 PISTGRP---ATVEDTSASLPLSGMQEELHTILKELRFITDRMKKADESDEIIS 423


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +2

Query: 479 PVSLGRSCRLAMLKAFISELPESILTQELHGQFEQATAIAEPQREATMTNLIIS 640
           P+S GR    A ++   + LP S + +ELH   ++   I +  ++A  ++ IIS
Sbjct: 441 PISTGRP---ATVEDTSASLPLSGMQEELHTILKELRFITDRMKKADESDEIIS 491


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +2

Query: 479 PVSLGRSCRLAMLKAFISELPESILTQELHGQFEQATAIAEPQREATMTNLIIS 640
           P+S GR    A ++   + LP S + +ELH   ++   I +  ++A  ++ IIS
Sbjct: 441 PISTGRP---ATVEDTSASLPLSGMQEELHTILKELRFITDRMKKADESDEIIS 491


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -1

Query: 343 RPVSSWQRERSTDCCSGTPNIGSATPNVKILQKEHQMS 230
           RP ++W       C + TPN  SA      +Q+  +MS
Sbjct: 208 RPAANWGYYAYPYCYNLTPNQPSAQCEATTMQENDKMS 245


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = -1

Query: 151 WTFPYLC 131
           W FPYLC
Sbjct: 5   WRFPYLC 11


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = -1

Query: 151 WTFPYLC 131
           W FPYLC
Sbjct: 43  WRFPYLC 49


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = -1

Query: 151 WTFPYLC 131
           W FPYLC
Sbjct: 96  WRFPYLC 102


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 328 WQRERSTDCC 299
           WQ ERS  CC
Sbjct: 69  WQMERSCMCC 78


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,285
Number of Sequences: 438
Number of extensions: 3069
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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