Silkworm BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0052
         (352 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      21   3.2  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    20   7.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    20   9.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    20   9.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    20   9.8  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    20   9.8  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           20   9.8  

>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 275 SHHQLNDIKIYHQQNIHIM 331
           SHH L+  ++ +QQ+ ++M
Sbjct: 72  SHHHLHHHQVLYQQSPYLM 90


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 334 VHYMNVLLVVNFD 296
           +H+ NV+  +NFD
Sbjct: 1   MHFNNVIKYINFD 13


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +1

Query: 256 NLFSLNLPSSIE*YQNLPPAEHSYNELPI 342
           N  SL L    E  +NL   E  ++ LPI
Sbjct: 70  NHISLTLDLEYELVENLQANEKPWSTLPI 98


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +1

Query: 256 NLFSLNLPSSIE*YQNLPPAEHSYNELPI 342
           N  SL L    E  +NL   E  ++ LPI
Sbjct: 108 NHISLTLDLEYELVENLQANEKPWSTLPI 136


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 135 EYRRGIPAKPKKCCGKNVIFTPIN 64
           ++  GIP   K     +VIF  IN
Sbjct: 134 QFGSGIPMGAKYLMDSDVIFVTIN 157


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
          protein.
          Length = 588

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 43 KNSIFYNIY 69
          KN+IFY +Y
Sbjct: 26 KNAIFYQVY 34


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 135 EYRRGIPAKPKKCCGKNVIFTPIN 64
           ++  GIP   K     +VIF  IN
Sbjct: 134 QFGSGIPMGAKYLMDSDVIFVTIN 157


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,068
Number of Sequences: 438
Number of extensions: 1546
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8060325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)