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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301A12f
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    26   0.26 
DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    21   7.5  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    21   7.5  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    21   7.5  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    21   7.5  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    21   7.5  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    21   7.5  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    21   7.5  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    21   7.5  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    21   7.5  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    21   7.5  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    21   10.0 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   10.0 

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -1

Query: 498 VLLTELSFSGLVIVCVLQPK*PITSVPTGYSVFLLSIT 385
           V++    F G +I C++  + P    PT Y +F L+++
Sbjct: 41  VVIFVTGFVGNIITCIVIWRNPSMQTPTNYYLFNLAVS 78


>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 151 QITETFCRKYGYSEKNNSSKPI 216
           +I  +    Y Y+  NN+ KP+
Sbjct: 80  KIISSLSNNYNYNNYNNNYKPL 101


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 151 QITETFCRKYGYSEKNNSSKPI 216
           +I  +    Y Y+  NN+ KP+
Sbjct: 80  KIISSLSNNYNYNNYNNNYKPL 101


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 151 QITETFCRKYGYSEKNNSSKPI 216
           +I  +    Y Y+  NN+ KP+
Sbjct: 80  KIISSLSNNYNYNNYNNNYKPL 101


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 151 QITETFCRKYGYSEKNNSSKPI 216
           +I  +    Y Y+  NN+ KP+
Sbjct: 80  KIISSLSNNYNYNNYNNNYKPL 101


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 151 QITETFCRKYGYSEKNNSSKPI 216
           +I  +    Y Y+  NN+ KP+
Sbjct: 313 KIISSLSNNYNYNNYNNNYKPL 334


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 151 QITETFCRKYGYSEKNNSSKPI 216
           +I  +    Y Y+  NN+ KP+
Sbjct: 313 KIISSLSNNYNYNNYNNNYKPL 334


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 151 QITETFCRKYGYSEKNNSSKPI 216
           +I  +    Y Y+  NN+ KP+
Sbjct: 313 KIISSLSNNYNYNNYNNNYKPL 334


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 151 QITETFCRKYGYSEKNNSSKPI 216
           +I  +    Y Y+  NN+ KP+
Sbjct: 313 KIISSLSNNYNYNNYNNNYKPL 334


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 151 QITETFCRKYGYSEKNNSSKPI 216
           +I  +    Y Y+  NN+ KP+
Sbjct: 313 KIISSLSNNYNYNNYNNNYKPL 334


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 151 QITETFCRKYGYSEKNNSSKPI 216
           +I  +    Y Y+  NN+ KP+
Sbjct: 302 KIISSLSNNYNYNNYNNNYKPL 323


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 399 LLSITLAICPPIISQGYTL 343
           LLS  +A+  P+IS G  L
Sbjct: 117 LLSADVAVATPLISMGALL 135


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 421  DTGYGSLWLENTYNH*T 471
            D G  S ++ENT+ H T
Sbjct: 1340 DAGEYSCYVENTFGHDT 1356


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,694
Number of Sequences: 438
Number of extensions: 3070
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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