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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0019.Seq
         (451 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    23   1.5  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    23   2.0  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    22   2.7  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    22   2.7  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    22   2.7  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    22   2.7  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    22   2.7  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    22   2.7  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   2.7  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   3.6  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   3.6  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   3.6  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   4.7  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    21   4.7  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    21   4.7  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    21   6.2  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    21   6.2  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   6.2  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    21   8.2  

>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = -3

Query: 290 CTTIIQFS-LNVWHVE*TCSQCSES 219
           C++ +Q S   +W +E +C  C ES
Sbjct: 57  CSSYLQVSGSKIWQMERSCMCCQES 81


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 60  NLNYIHENRWNLNYNS 107
           N NY + N +N NYN+
Sbjct: 88  NYNYSNYNNYNNNYNN 103


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 57  LNLNYIHENRWNLNYNS 107
           L+ N IH N +  NYN+
Sbjct: 84  LSNNTIHNNNYKYNYNN 100



 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 66  NYIHENRWNLNYNS*IFFN 122
           NY + N  N NYN  +++N
Sbjct: 97  NYNNNNYNNNNYNKKLYYN 115



 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 58  KKVYIAVININKLYIP 11
           KK+Y  +INI ++ +P
Sbjct: 110 KKLYYNIINIEQIPVP 125


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 57  LNLNYIHENRWNLNYNS 107
           L+ N IH N +  NYN+
Sbjct: 84  LSNNTIHNNNYKYNYNN 100



 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 66  NYIHENRWNLNYNS*IFFN 122
           NY + N  N NYN  +++N
Sbjct: 97  NYNNNNYNNNNYNKKLYYN 115



 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 58  KKVYIAVININKLYIP 11
           KK+Y  +INI ++ +P
Sbjct: 110 KKLYYNIINIEQIPVP 125


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 57  LNLNYIHENRWNLNYNS 107
           L+ N IH N +  NYN+
Sbjct: 85  LSNNTIHNNNYKYNYNN 101


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 57  LNLNYIHENRWNLNYNS 107
           L+ N IH N +  NYN+
Sbjct: 85  LSNNTIHNNNYKYNYNN 101


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 57  LNLNYIHENRWNLNYNS 107
           L+ N IH N +  NYN+
Sbjct: 85  LSNNTIHNNNYKYNYNN 101


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 57  LNLNYIHENRWNLNYNS 107
           L+ N IH N +  NYN+
Sbjct: 85  LSNNTIHNNNYKYNYNN 101


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -1

Query: 61  FKKVYIAVININKLYIP 11
           +KK+Y  +INI ++ +P
Sbjct: 349 YKKLYYNIINIEQIPVP 365


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
 Frame = -3

Query: 182 DFRANFICNLISFYFICLSKIKEN---LTVV 99
           D R  + C L      CL  IKEN   LTVV
Sbjct: 410 DVRPKYDCTLEKSQDDCLKAIKENNADLTVV 440


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
 Frame = -3

Query: 182 DFRANFICNLISFYFICLSKIKEN---LTVV 99
           D R  + C L      CL  IKEN   LTVV
Sbjct: 410 DVRPKYDCTLEKSQDDCLKAIKENNADLTVV 440


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
 Frame = -3

Query: 182 DFRANFICNLISFYFICLSKIKEN---LTVV 99
           D R  + C L      CL  IKEN   LTVV
Sbjct: 410 DVRPKYDCTLEKSQDDCLKAIKENNADLTVV 440


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
 Frame = -3

Query: 227 SESAVTYFGFTF*TS-----DFRANFICNLISFYFICLSKIK 117
           SE+ + +F + F        D   NFI +L ++Y I  SK+K
Sbjct: 557 SENHIEWFDYAFIPGNLKWLDIHGNFIESLGNYYKIRDSKVK 598


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 67  FKFKKVYIAVININKLYIP 11
           +  KK+Y  +INI ++ +P
Sbjct: 318 YNSKKLYYNIINIEQIPVP 336


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 67  FKFKKVYIAVININKLYIP 11
           +  KK+Y  +INI ++ +P
Sbjct: 329 YNSKKLYYNIINIEQIPVP 347


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 58  KKVYIAVININKLYIP 11
           KK+Y  +INI ++ +P
Sbjct: 330 KKLYYNIINIEQIPVP 345


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 58  KKVYIAVININKLYIP 11
           KK+Y  +INI ++ +P
Sbjct: 334 KKLYYNIINIEQIPVP 349


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 58  KKVYIAVININKLYIP 11
           KK+Y  +INI ++ +P
Sbjct: 352 KKLYYNIINIEQIPVP 367


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 150 IFLFYMSFKN*RKFNCCNSNSNDFHVCN 67
           IF F+MS ++   +  CN+  N  +  N
Sbjct: 85  IFYFFMSMRSELPWGSCNNYWNTKNCVN 112


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,925
Number of Sequences: 438
Number of extensions: 1969
Number of successful extensions: 23
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)

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