Silkworm BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0017
         (820 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    28   0.12 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    25   0.84 
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     24   1.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   4.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   4.5  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   5.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   7.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   7.8  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    22   7.8  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    22   7.8  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 27.9 bits (59), Expect = 0.12
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +2

Query: 215 INRSDGRPRSRHVLSGYTQRGGDILGP 295
           I R DG P + +V+SG T +GG +L P
Sbjct: 81  ILRYDGVPSTLNVISGKTGKGGRLLKP 107


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 25.0 bits (52), Expect = 0.84
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 215 INRSDGRPRSRHVLSGYTQRGGDILGP 295
           I R+DG P S +V+S     GG +L P
Sbjct: 81  ILRNDGVPSSLNVISNKIGNGGPLLEP 107


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 435 PQCRWTRRLTAETTWRYS 488
           P+C+W+R+    T W  S
Sbjct: 153 PECKWSRKGFLRTRWSIS 170


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 231 PSLRLMNPAPRAAPVLSPPP 172
           P+L L  P  +   V+SPPP
Sbjct: 887 PALALAEPYNQRGTVVSPPP 906


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 231 PSLRLMNPAPRAAPVLSPPP 172
           P+L L  P  +   V+SPPP
Sbjct: 925 PALALAEPYNQRGTVVSPPP 944


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +2

Query: 491 WGPHHASSLASTSRVTSRIAWRTQHASVPASTLANIHHIQLLNLF 625
           W    A+    T  VTS +   TQHA   AS L  + +++ ++ F
Sbjct: 267 WIKPEAAPARVTLGVTSLLTLSTQHAKSQAS-LPPVSYLKAVDAF 310


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 404 DYRGSEYVY 430
           DYRG EY+Y
Sbjct: 253 DYRGEEYLY 261


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 404 DYRGSEYVY 430
           DYRG EY+Y
Sbjct: 253 DYRGEEYLY 261


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 419 EYVYPAAVPLDSETHGGDDVA 481
           EY+ P  +P   E H  +D+A
Sbjct: 31  EYLMPDIMPCADELHISEDIA 51


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 419 EYVYPAAVPLDSETHGGDDVA 481
           EY+ P  +P   E H  +D+A
Sbjct: 31  EYLMPDIMPCADELHISEDIA 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,184
Number of Sequences: 438
Number of extensions: 5333
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)