Silkworm BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0075
         (624 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   2.4  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   2.4  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   2.4  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   2.4  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   3.2  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   5.6  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              22   5.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   5.6  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   9.8  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 119 FFFIHYKNT 93
           FFFIHYK T
Sbjct: 480 FFFIHYKGT 488


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 119 FFFIHYKNT 93
           FFFIHYK T
Sbjct: 466 FFFIHYKGT 474


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 119 FFFIHYKNT 93
           FFFIHYK T
Sbjct: 500 FFFIHYKGT 508


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 119 FFFIHYKNT 93
           FFFIHYK T
Sbjct: 449 FFFIHYKGT 457


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +2

Query: 326 LYHVSCLIFYLI 361
           LY +SC++F+LI
Sbjct: 205 LYQLSCILFFLI 216


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 511 FGISSLELRMDAWKPRPKNI 452
           F + +L +   AWKP P+N+
Sbjct: 7   FCLMALSIVDAAWKPLPENL 26


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 13 VFFFFFCIKPFLAPRRSVINK 75
          +F F FC+   LA     INK
Sbjct: 5  IFIFAFCLVGILAVSEESINK 25


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 511 FGISSLELRMDAWKPRPKNI 452
           F + +L +   AWKP P+N+
Sbjct: 7   FCLMALSIVDAAWKPLPENL 26


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 418 REYDKQNSKYH*YFSVLASMRP 483
           R  DK    YH + +V+ASM P
Sbjct: 159 RNGDKPPLTYHQFQTVVASMDP 180


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,769
Number of Sequences: 438
Number of extensions: 3014
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)