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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0049
         (517 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    23   1.4  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              21   5.7  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    21   5.7  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    21   5.7  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    21   5.7  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    21   5.7  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    21   5.7  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    21   5.7  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    21   5.7  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   5.7  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   5.7  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   5.7  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   5.7  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   5.7  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   5.7  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   5.7  

>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 57  SVSDTPSLKDLPKVATDLKS 116
           SVS  PS+K + K ATD  S
Sbjct: 156 SVSCVPSVKHVAKCATDFSS 175


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +3

Query: 105 DLKSQLEGFNTSCLRDVDTNEKIV 176
           +LKS L    + C++++ T ++I+
Sbjct: 21  ELKSGLHTVQSVCMKEIGTAQQII 44


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +2

Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
           R YRE      E  RD  E   S + R       EQIP
Sbjct: 54  REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 91


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +2

Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
           R YRE      E  RD  E   S + R       EQIP
Sbjct: 54  REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 91


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +2

Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
           R YRE      E  RD  E   S + R       EQIP
Sbjct: 54  REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 91


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +2

Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
           R YRE      E  RD  E   S + R       EQIP
Sbjct: 54  REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 91


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +2

Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
           R YRE      E  RD  E   S + R       EQIP
Sbjct: 54  REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 91


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +2

Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
           R YRE      E  RD  E   S + R       EQIP
Sbjct: 54  REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 91


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +2

Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
           R YRE      E  RD  E   S + R       EQIP
Sbjct: 54  REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 91


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +2

Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
           R YRE      E  RD  E   S + R       EQIP
Sbjct: 303 REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 340


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +2

Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
           R YRE      E  RD  E   S + R       EQIP
Sbjct: 303 REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 340


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +2

Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
           R YRE      E  RD  E   S + R       EQIP
Sbjct: 303 REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 340


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +2

Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
           R YRE      E  RD  E   S + R       EQIP
Sbjct: 303 REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 340


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +2

Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
           R YRE      E  RD  E   S + R       EQIP
Sbjct: 303 REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 340


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +2

Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
           R YRE      E  RD  E   S + R       EQIP
Sbjct: 303 REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 340


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +2

Query: 227 RRYREV*FEPAEAHRDSGEEPASGQRRYRSGEGKEQIP 340
           R YRE      E  RD  E   S + R       EQIP
Sbjct: 303 REYREYRETSRERSRDRRERGRSREHRIIPSHYIEQIP 340


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,614
Number of Sequences: 438
Number of extensions: 2843
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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