Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0031
(698 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 25 0.69
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 25 0.91
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 23 2.1
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 2.1
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 2.1
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 23 2.8
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 6.4
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 6.4
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 6.4
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 6.4
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 6.4
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 22 6.4
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 22 6.4
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 8.5
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 8.5
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 8.5
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 8.5
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 8.5
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 8.5
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 8.5
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 8.5
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 25.0 bits (52), Expect = 0.69
Identities = 16/66 (24%), Positives = 31/66 (46%)
Frame = -3
Query: 222 HNTYIQTKSINKICRKLHWYFFNIYSSIPLQSRITRALKGDFFSSLNLFNVFTYYYI*DT 43
++T ++ + + +K+ YF P S+ + G F S+N+ ++TY+ DT
Sbjct: 411 YSTSMRDPAFYMLYQKILSYFLRYKKLQPQYSQSELQMPGVKFESVNIDKLYTYFDKCDT 470
Query: 42 EDLNTV 25
N V
Sbjct: 471 LINNAV 476
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 24.6 bits (51), Expect = 0.91
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 405 YEVKFILNNILYWKYL 452
+ V FI+ NILYW ++
Sbjct: 452 FPVAFIIFNILYWSFI 467
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 231 DNHHNTYIQTKSINKICRKLHWYFFNIYSSIPL 133
DN + K I K + W+F ++ SSIPL
Sbjct: 148 DNAEQVILDPKLIAKHYLRT-WFFLDLISSIPL 179
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 231 DNHHNTYIQTKSINKICRKLHWYFFNIYSSIPL 133
DN + K I K + W+F ++ SSIPL
Sbjct: 148 DNAEQVILDPKLIAKHYLRT-WFFLDLISSIPL 179
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 231 DNHHNTYIQTKSINKICRKLHWYFFNIYSSIPL 133
DN + K I K + W+F ++ SSIPL
Sbjct: 148 DNAEQVILDPKLIAKHYLRT-WFFLDLISSIPL 179
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 23.0 bits (47), Expect = 2.8
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = -3
Query: 222 HNTYIQTKSINKICRKLHWYFFNIYSSIPLQSRITRALKGDFFSSLNLFNVFTYYYI*DT 43
++T ++ + + + + YF P S+ + G F S+N+ ++TY+ DT
Sbjct: 411 YSTSMRDPAFYMLYQNILSYFLRYKKLQPQYSQSELQMPGVKFESVNIDKLYTYFDKCDT 470
Query: 42 EDLNTV 25
N V
Sbjct: 471 LINNAV 476
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.8 bits (44), Expect = 6.4
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 150 YSSIPLQSRITRALKGDFFSSLNLFNVFTY 61
Y+S+ R +R + FF ++N+F F Y
Sbjct: 417 YNSVSKIDRASRIVFPLFFLAINVFYWFAY 446
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -3
Query: 228 NHHNTYIQTKSINKICRKLHWYFFNIYSSIPL 133
+++N Y N +KL +Y N IP+
Sbjct: 92 SNYNNYNNNNYNNNNYKKLQYYNINYIEQIPI 123
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -3
Query: 228 NHHNTYIQTKSINKICRKLHWYFFNIYSSIPL 133
+++N Y N +KL +Y N IP+
Sbjct: 92 SNYNNYNNNNYNNNNYKKLQYYNINYIEQIPI 123
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -3
Query: 228 NHHNTYIQTKSINKICRKLHWYFFNIYSSIPL 133
+++N Y N +KL +Y N IP+
Sbjct: 92 SNYNNYNNNNYNNNNYKKLQYYNINYIEQIPI 123
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -3
Query: 228 NHHNTYIQTKSINKICRKLHWYFFNIYSSIPL 133
+++N Y N +KL +Y N IP+
Sbjct: 92 SNYNNYNNNNYNNNNYKKLQYYNINYIEQIPI 123
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.8 bits (44), Expect = 6.4
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +1
Query: 208 NVCIMMIINRTDIRNLDRRPNRTRKKLDISGAEEYQRIY*DRYS 339
N ++ + +R DI + RR +R + Y+R DRY+
Sbjct: 101 NFPMISVFSRQDIETIIRRNSRYPLRPPQEVISHYRRTRRDRYT 144
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 419 KFYFVLSNTNNSKVLILI*PYL 354
KF+ +L+ TNN L+ + P L
Sbjct: 257 KFHSILNRTNNIFELVTVEPIL 278
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +1
Query: 130 LEWYRRVNIEEVPM 171
L++Y +NIE++P+
Sbjct: 108 LQYYNIINIEQIPV 121
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +1
Query: 130 LEWYRRVNIEEVPM 171
L++Y +NIE++P+
Sbjct: 108 LQYYNIINIEQIPV 121
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +1
Query: 130 LEWYRRVNIEEVPM 171
L++Y +NIE++P+
Sbjct: 108 LQYYNIINIEQIPV 121
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +1
Query: 130 LEWYRRVNIEEVPM 171
L++Y +NIE++P+
Sbjct: 108 LQYYNIINIEQIPV 121
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +1
Query: 130 LEWYRRVNIEEVPM 171
L++Y +NIE++P+
Sbjct: 108 LQYYNIINIEQIPV 121
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +1
Query: 130 LEWYRRVNIEEVPM 171
L++Y +NIE++P+
Sbjct: 108 LQYYNIINIEQIPV 121
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +1
Query: 130 LEWYRRVNIEEVPM 171
L++Y +NIE++P+
Sbjct: 112 LQYYNIINIEQIPV 125
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +1
Query: 130 LEWYRRVNIEEVPM 171
L++Y +NIE++P+
Sbjct: 108 LQYYNIINIEQIPV 121
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,324
Number of Sequences: 438
Number of extensions: 3265
Number of successful extensions: 27
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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