Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10a24
(714 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 24 1.6
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 5.0
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 6.6
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 6.6
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 6.6
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 6.6
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 6.6
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 6.6
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 6.6
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 22 6.6
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 6.6
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 8.8
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 8.8
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 8.8
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 8.8
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 8.8
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 8.8
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 8.8
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 8.8
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 8.8
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 8.8
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 415 KDSLLRETTL*CGNRNHSLRN 353
K SLL+E T+ C H L+N
Sbjct: 379 KQSLLKENTVTCQEAMHMLKN 399
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 157 KNLYFSKPRYLRSAYSLKTRTC 92
KN F KP + ++Y+L + C
Sbjct: 1613 KNCLFRKPEHFVASYALISNQC 1634
Score = 21.8 bits (44), Expect = 6.6
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -3
Query: 382 CGNRNHSLRNEYIG 341
CGN +H N+++G
Sbjct: 1598 CGNFDHDSTNDFVG 1611
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.6
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = +3
Query: 180 CNDPHLCKIIENNYNY 227
C +P + + NNY Y
Sbjct: 76 CKEPKIISSLSNNYKY 91
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.6
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = +3
Query: 180 CNDPHLCKIIENNYNY 227
C +P + + NNY Y
Sbjct: 76 CKEPKIISSLSNNYKY 91
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.6
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = +3
Query: 180 CNDPHLCKIIENNYNY 227
C +P + + NNY Y
Sbjct: 76 CKEPKIISSLSNNYKY 91
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.6
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = +3
Query: 180 CNDPHLCKIIENNYNY 227
C +P + + NNY Y
Sbjct: 76 CKEPKIISSLSNNYKY 91
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.6
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = +3
Query: 180 CNDPHLCKIIENNYNY 227
C +P + + NNY Y
Sbjct: 76 CKEPKIISSLSNNYKY 91
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.6
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = +3
Query: 180 CNDPHLCKIIENNYNY 227
C +P + + NNY Y
Sbjct: 76 CKEPKIISSLSNNYKY 91
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.6
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = +3
Query: 180 CNDPHLCKIIENNYNY 227
C +P + + NNY Y
Sbjct: 76 CKEPKIISSLSNNYKY 91
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 445 NTTTCGNPHVKDSL 404
NT C NP+ +DSL
Sbjct: 106 NTKNCVNPYDRDSL 119
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 235 KYLKRPPTTCATSGTI 282
K + PP CA SG+I
Sbjct: 309 KSITEPPKNCADSGSI 324
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/62 (22%), Positives = 25/62 (40%)
Frame = +3
Query: 42 LQSKWICLRLNDAIIKRHVLVLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNY 221
L+ + C R + + + L +E KY K + + +P + + NNY
Sbjct: 30 LEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTEREKSKEPKIISSLSNNY 89
Query: 222 NY 227
NY
Sbjct: 90 NY 91
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/62 (22%), Positives = 25/62 (40%)
Frame = +3
Query: 42 LQSKWICLRLNDAIIKRHVLVLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNY 221
L+ + C R + + + L +E KY K + + +P + + NNY
Sbjct: 30 LEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTEREKSKEPKIISSLSNNY 89
Query: 222 NY 227
NY
Sbjct: 90 NY 91
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/62 (22%), Positives = 25/62 (40%)
Frame = +3
Query: 42 LQSKWICLRLNDAIIKRHVLVLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNY 221
L+ + C R + + + L +E KY K + + +P + + NNY
Sbjct: 30 LEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTEREKSKEPKIISSLSNNY 89
Query: 222 NY 227
NY
Sbjct: 90 NY 91
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/62 (22%), Positives = 25/62 (40%)
Frame = +3
Query: 42 LQSKWICLRLNDAIIKRHVLVLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNY 221
L+ + C R + + + L +E KY K + + +P + + NNY
Sbjct: 30 LEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTEREKSKEPKIISSLSNNY 89
Query: 222 NY 227
NY
Sbjct: 90 NY 91
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/62 (22%), Positives = 25/62 (40%)
Frame = +3
Query: 42 LQSKWICLRLNDAIIKRHVLVLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNY 221
L+ + C R + + + L +E KY K + + +P + + NNY
Sbjct: 263 LEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTEREKSKEPKIISSLSNNY 322
Query: 222 NY 227
NY
Sbjct: 323 NY 324
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/62 (22%), Positives = 25/62 (40%)
Frame = +3
Query: 42 LQSKWICLRLNDAIIKRHVLVLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNY 221
L+ + C R + + + L +E KY K + + +P + + NNY
Sbjct: 263 LEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTEREKSKEPKIISSLSNNY 322
Query: 222 NY 227
NY
Sbjct: 323 NY 324
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/62 (22%), Positives = 25/62 (40%)
Frame = +3
Query: 42 LQSKWICLRLNDAIIKRHVLVLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNY 221
L+ + C R + + + L +E KY K + + +P + + NNY
Sbjct: 263 LEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTEREKSKEPKIISSLSNNY 322
Query: 222 NY 227
NY
Sbjct: 323 NY 324
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/62 (22%), Positives = 25/62 (40%)
Frame = +3
Query: 42 LQSKWICLRLNDAIIKRHVLVLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNY 221
L+ + C R + + + L +E KY K + + +P + + NNY
Sbjct: 263 LEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTEREKSKEPKIISSLSNNY 322
Query: 222 NY 227
NY
Sbjct: 323 NY 324
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/62 (22%), Positives = 25/62 (40%)
Frame = +3
Query: 42 LQSKWICLRLNDAIIKRHVLVLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNY 221
L+ + C R + + + L +E KY K + + +P + + NNY
Sbjct: 263 LEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTEREKSKEPKIISSLSNNY 322
Query: 222 NY 227
NY
Sbjct: 323 NY 324
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 8.8
Identities = 14/62 (22%), Positives = 25/62 (40%)
Frame = +3
Query: 42 LQSKWICLRLNDAIIKRHVLVLSEYADLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNY 221
L+ + C R + + + L +E KY K + + +P + + NNY
Sbjct: 252 LEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTEREKSKEPKIISSLSNNY 311
Query: 222 NY 227
NY
Sbjct: 312 NY 313
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,630
Number of Sequences: 438
Number of extensions: 4964
Number of successful extensions: 44
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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