Silkworm BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0022
         (448 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    25   0.38 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   1.5  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   2.7  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   3.5  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   4.6  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    21   6.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   6.1  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         21   8.1  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 25.0 bits (52), Expect = 0.38
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -1

Query: 247 STLNVVPGRTTSSMRDLKPW 188
           STLNV+ G+T    R LKP+
Sbjct: 89  STLNVISGKTGKGGRLLKPY 108


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 378 EHWSHTVPTSPRLPGILLPLHQPRRI 301
           E W  T PT+P  P ++ P    RRI
Sbjct: 442 ERW--TTPTTPHSPLLVAPFGAGRRI 465


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 347 RGFPGYYFPYTNQEGYLSPLV 285
           +GFPG   PYT  +  L  LV
Sbjct: 27  QGFPGKNSPYTVTQAILIALV 47



 Score = 22.2 bits (45), Expect = 2.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 82  NFIL*LFIYTSIYFFIFCVS 141
           +F + LF+   +Y+ IFC +
Sbjct: 210 SFYIPLFVMIQVYYKIFCAA 229


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 163 INISMCTEPMASSLSYLM 216
           + IS  TEP +S+ SY++
Sbjct: 191 VEISQMTEPSSSTKSYVL 208


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 159 VESTNSRHAEDKEVYRRIYE*LENKIY 79
           +ES NS+   DK+    I + L N ++
Sbjct: 80  IESDNSKEVNDKKEENFIVDRLRNDLF 106


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/33 (24%), Positives = 18/33 (54%)
 Frame = +1

Query: 169 ISMCTEPMASSLSYLMLFAQARHSMLINMPVLG 267
           I++C   + S   + +L ++   S  + +P+LG
Sbjct: 267 IALCINILLSQTMFFLLISEIIPSTSLALPLLG 299


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -3

Query: 368 PIQYLPHRGFPGYYFPY 318
           P  Y PH+  P  Y P+
Sbjct: 313 PPSYHPHQHHPSQYHPH 329


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 182 QSPWLQVSHT*C 217
           QS WL ++H+ C
Sbjct: 70  QSKWLSINHSAC 81


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,483
Number of Sequences: 438
Number of extensions: 2879
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)