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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060093.seq
         (693 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                23   2.1  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   6.4  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    21   8.4  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    21   8.4  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    21   8.4  

>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -2

Query: 605 GAALDQRIWLCLSLNLHHYCILSTLSCAF*T*HSNGTV 492
           G  L  R+   + +     CIL +++CA    H+ G V
Sbjct: 140 GTTLQNRLDEAILIKNERICILKSITCALQFCHNAGIV 177


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1

Query: 201 SAFCMMRFFLIENCFVCHFCWYFYLHLRIPIL 106
           +A C M++ LIE+ F      +F L + I I+
Sbjct: 208 TARCSMKWTLIEHAFEISTMLFFVLPMTIIIV 239


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 235 YSCSSSSRLYAQRVLHDAIFSYR 167
           YSC + S L +    H  ++ YR
Sbjct: 24  YSCVNKSMLNSHLKSHSNVYQYR 46


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/31 (35%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
 Frame = -1

Query: 207 TPSAFCMMRFFLIENCFVCHFC--WYFYLHL 121
           TPS        +   CFVC     W  YLH+
Sbjct: 400 TPSDIDKYSRIVFPVCFVCFNLMYWIIYLHI 430


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/31 (35%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
 Frame = -1

Query: 207 TPSAFCMMRFFLIENCFVCHFC--WYFYLHL 121
           TPS        +   CFVC     W  YLH+
Sbjct: 400 TPSDIDKYSRIVFPVCFVCFNLMYWIIYLHI 430


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,806
Number of Sequences: 438
Number of extensions: 3028
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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