Silkworm BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0019
         (517 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    25   0.46 
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   3.3  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    22   3.3  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   3.3  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   3.3  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    21   7.5  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    21   7.5  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   10.0 
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   10.0 

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
 Frame = +1

Query: 202 RPPPNHEQIPSEPNQEP----PNYGEQDRFPPNHNGYRPPNGQNG 324
           +P P H ++  EP  EP    P Y  Q R PP+    R P  + G
Sbjct: 108 QPRPPHPRLRREPEAEPGNNRPVYIPQPR-PPHPRLRREPEAEPG 151



 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 202 RPPPNHEQIPSEPNQEPPN 258
           +P P H ++  EP  EP N
Sbjct: 134 QPRPPHPRLRREPEAEPGN 152



 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 190 VNQQRPPPNHEQIPSEPNQEPPN 258
           + Q RPP    +  +EP  EP N
Sbjct: 50  IPQPRPPHPRLRREAEPKAEPGN 72


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 190 VNQQRPPPNHEQIPSEPNQEPPN 258
           ++Q RPP    +  +EP  EP N
Sbjct: 105 ISQPRPPHPRLRREAEPEAEPGN 127



 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 190 VNQQRPPPNHEQIPSEPNQEPPN 258
           ++Q RPP    +  +EP  EP N
Sbjct: 161 ISQPRPPHPRLRREAEPEAEPGN 183



 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 190 VNQQRPPPNHEQIPSEPNQEPPN 258
           + Q RPP    +  +EP  EP N
Sbjct: 49  IPQPRPPHPRLRREAEPEAEPGN 71



 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 190 VNQQRPPPNHEQIPSEPNQEPPN 258
           + Q RPP    +  +EP  EP N
Sbjct: 189 IPQPRPPHPRLRREAEPEAEPGN 211



 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 190 VNQQRPPPNHEQIPSEPNQEPPN 258
           + Q RPP    +  +EP  EP N
Sbjct: 217 IPQPRPPHPRLRREAEPEAEPGN 239


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +1

Query: 175 HGQFGVNQQRPPPNHEQIPSEPNQEPPN 258
           HG F    + PP +   + S  N +P N
Sbjct: 73  HGGFKKTDKHPPKDFGDVDSLGNLDPAN 100


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +1

Query: 175 HGQFGVNQQRPPPNHEQIPSEPNQEPPN 258
           HG F    + PP +   + S  N +P N
Sbjct: 89  HGGFKKTDKHPPKDFGDVDSLGNLDPAN 116


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 12/45 (26%), Positives = 17/45 (37%)
 Frame = +1

Query: 190 VNQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 324
           + QQ   P+      +P+        Q   PPN +   PP G  G
Sbjct: 9   ITQQSQQPSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPG 53


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 190 VNQQRPPPNHEQIPSEPNQEPPN 258
           + Q RPP    +  +EP  EP N
Sbjct: 50  IPQPRPPHPRLRREAEPEAEPGN 72



 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 190 VNQQRPPPNHEQIPSEPNQEPPN 258
           + Q RPP    +  +EP  EP N
Sbjct: 78  IPQPRPPHPRLRREAEPEAEPGN 100



 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 190 VNQQRPPPNHEQIPSEPNQEPPN 258
           + Q RPP    +  +EP  EP N
Sbjct: 106 IPQPRPPHPRLRREAEPEAEPGN 128


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 190 VNQQRPPPNHEQIPSEPNQEPPN 258
           + Q RPP    +  +EP  EP N
Sbjct: 21  IPQPRPPHPRLRREAEPEAEPGN 43



 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 190 VNQQRPPPNHEQIPSEPNQEPPN 258
           + Q RPP    +  +EP  EP N
Sbjct: 49  IPQPRPPHPRLRREAEPEAEPGN 71



 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 190 VNQQRPPPNHEQIPSEPNQEPPN 258
           + Q RPP    +  +EP  EP N
Sbjct: 77  IPQPRPPHPRLRREAEPEAEPGN 99



 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 190 VNQQRPPPNHEQIPSEPNQEPPN 258
           + Q RPP    +  +EP  EP N
Sbjct: 105 IPQPRPPHPRLRREAEPEAEPGN 127



 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 190 VNQQRPPPNHEQIPSEPNQEPPN 258
           + Q RPP    +  +EP  EP N
Sbjct: 161 IPQPRPPHPRLRREAEPEAEPGN 183


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 313 RSEVCIRCGWVGIY 272
           R E+  RC W+GI+
Sbjct: 344 RQELQKRCKWMGIH 357


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 313 RSEVCIRCGWVGIY 272
           R E+  RC W+GI+
Sbjct: 344 RQELQKRCKWMGIH 357


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,859
Number of Sequences: 438
Number of extensions: 3459
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)