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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0001
         (367 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    25   0.37 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   0.85 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   3.4  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   4.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   6.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   6.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   8.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   8.0  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    20   8.0  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    20   8.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    20   8.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   8.0  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    20   8.0  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    20   8.0  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    20   8.0  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    20   8.0  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    20   8.0  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    20   8.0  

>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.6 bits (51), Expect = 0.37
 Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
 Frame = +1

Query: 58  KQYGKLNGYS*ERCYRYP*NKQHA-SGEWSQSTNILKRTGSSSARRKLHNSNSWMSRQTS 234
           +QY KL+    +        K+++ S E  Q     KR            S +   R+ S
Sbjct: 17  RQYEKLHNEKEKFLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERERS 76

Query: 235 HRPPRLSSGASYISAWITKSNYRQIS*RYSTGHKK 339
             P  +S+  S  + +   +NY   +  Y+T +KK
Sbjct: 77  KEPKIISNNNSLSNNYNYNNNYNNYNNNYNTNYKK 111


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.4 bits (48), Expect = 0.85
 Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -2

Query: 93  FSTVTVEFSVLF-LCSCTASMSVQCLVSLN 7
           F T+  +  V F + SCTAS+   C++S++
Sbjct: 109 FGTIMCDLWVSFDVLSCTASILNLCMISVD 138


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 211  SWMSRQTSHRPPRLSSGASYI 273
            +W  +Q    PP  SSG +Y+
Sbjct: 1349 AWRQQQPPPPPPPPSSGQAYL 1369


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 95  GATDTLKTNNMQVANGVSQQIY 160
           G T  +K NN+  + G+  +IY
Sbjct: 44  GQTPLIKLNNIPKSYGIKCEIY 65


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 43  GTGTQKQYGKLNGYS*ERCYRYP*NKQHASGEWSQST 153
           GTG Q +  +LNG + E    Y    + + G+ +Q++
Sbjct: 376 GTGRQSELLRLNGINREDRGMYQCIVRRSEGDTAQAS 412


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 43  GTGTQKQYGKLNGYS*ERCYRYP*NKQHASGEWSQST 153
           GTG Q +  +LNG + E    Y    + + G+ +Q++
Sbjct: 376 GTGRQSELLRLNGINREDRGMYQCIVRRSEGDTAQAS 412


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +2

Query: 344 DGKWHKI 364
           DGKWH I
Sbjct: 347 DGKWHNI 353


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +2

Query: 344 DGKWHKI 364
           DGKWH I
Sbjct: 347 DGKWHNI 353


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -1

Query: 358 VPFPISLFCG 329
           VP P+ ++CG
Sbjct: 119 VPIPVPIYCG 128


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 182 VPAESYTTAIPGCHV 226
           +P+E+    +PGC V
Sbjct: 303 IPSEARELQLPGCEV 317


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 182 VPAESYTTAIPGCHV 226
           +P+E+    +PGC V
Sbjct: 318 IPSEARELQLPGCEV 332


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 297 VRLSNPGTDIGGSA 256
           +R S PG ++GGS+
Sbjct: 616 IRWSYPGEEMGGSS 629


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 358 VPFPISLFCG 329
           VP PI ++CG
Sbjct: 334 VPVPIPIYCG 343


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 358 VPFPISLFCG 329
           VP PI ++CG
Sbjct: 345 VPVPIPIYCG 354


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 358 VPFPISLFCG 329
           VP PI ++CG
Sbjct: 345 VPVPIPIYCG 354


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 358 VPFPISLFCG 329
           VP PI ++CG
Sbjct: 334 VPVPIPIYCG 343


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -2

Query: 270 IGGSAAKPRGAMRSLT*HPGIAVV*LSAGTT 178
           IGG    P G + +    PG+ V    AG T
Sbjct: 199 IGGIGTVPVGRVETGVLKPGMVVTFAPAGLT 229


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -2

Query: 270 IGGSAAKPRGAMRSLT*HPGIAVV*LSAGTT 178
           IGG    P G + +    PG+ V    AG T
Sbjct: 256 IGGIGTVPVGRVETGVLKPGMVVTFAPAGLT 286


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,036
Number of Sequences: 438
Number of extensions: 2294
Number of successful extensions: 40
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)

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