Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30100
(637 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 159 2e-39
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 158 3e-39
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 158 3e-39
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 158 3e-39
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 156 1e-38
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 155 2e-38
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 155 2e-38
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 150 7e-37
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 150 7e-37
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 150 9e-37
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 136 9e-33
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 113 9e-26
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 65 4e-11
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 60 9e-10
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 59 3e-09
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 56 1e-08
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 49 3e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 48 5e-06
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 39 0.002
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 33 0.21
At5g43500.2 68418.m05318 expressed protein 30 1.5
At5g43500.1 68418.m05319 expressed protein 30 1.5
At1g53510.1 68414.m06068 mitogen-activated protein kinase, putat... 28 6.0
At1g05580.1 68414.m00578 cation/hydrogen exchanger, putative (CH... 27 7.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 159 bits (385), Expect = 2e-39
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
RCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM K
Sbjct: 258 RCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSK 317
Query: 182 EITALAPSTMKIKIIAPPERKY 247
EITALAPS+MKIK++APPERKY
Sbjct: 318 EITALAPSSMKIKVVAPPERKY 339
Score = 74.5 bits (175), Expect = 5e-14
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
IGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 343 IGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 158 bits (383), Expect = 3e-39
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
RCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+ GIADRM K
Sbjct: 258 RCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSK 317
Query: 182 EITALAPSTMKIKIIAPPERKY 247
EITALAPS+MKIK++APPERKY
Sbjct: 318 EITALAPSSMKIKVVAPPERKY 339
Score = 72.9 bits (171), Expect = 2e-13
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
IGGSILASLSTFQQMWISK EYDE+GP IVHRKCF
Sbjct: 343 IGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 158 bits (383), Expect = 3e-39
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
RCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+ GIADRM K
Sbjct: 258 RCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSK 317
Query: 182 EITALAPSTMKIKIIAPPERKY 247
EITALAPS+MKIK++APPERKY
Sbjct: 318 EITALAPSSMKIKVVAPPERKY 339
Score = 31.5 bits (68), Expect = 0.48
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISK 312
IGGSILASLSTFQQ+ I +
Sbjct: 343 IGGSILASLSTFQQVKIDQ 361
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 158 bits (383), Expect = 3e-39
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
RCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+ GIADRM K
Sbjct: 258 RCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSK 317
Query: 182 EITALAPSTMKIKIIAPPERKY 247
EITALAPS+MKIK++APPERKY
Sbjct: 318 EITALAPSSMKIKVVAPPERKY 339
Score = 72.9 bits (171), Expect = 2e-13
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
IGGSILASLSTFQQMWISK EYDE+GP IVHRKCF
Sbjct: 343 IGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 156 bits (379), Expect = 1e-38
Identities = 70/82 (85%), Positives = 76/82 (92%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
RCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM K
Sbjct: 258 RCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSK 317
Query: 182 EITALAPSTMKIKIIAPPERKY 247
EITALAPS+MKIK++APPERKY
Sbjct: 318 EITALAPSSMKIKVVAPPERKY 339
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
IGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct: 343 IGGSILASLSTFQQMWISKSEYDESGPSIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 155 bits (377), Expect = 2e-38
Identities = 69/82 (84%), Positives = 75/82 (91%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
RCPE L+QPS +GME GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM K
Sbjct: 258 RCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSK 317
Query: 182 EITALAPSTMKIKIIAPPERKY 247
EITALAPS+MKIK++APPERKY
Sbjct: 318 EITALAPSSMKIKVVAPPERKY 339
Score = 74.5 bits (175), Expect = 5e-14
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
IGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 343 IGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 155 bits (377), Expect = 2e-38
Identities = 69/82 (84%), Positives = 75/82 (91%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
RCPE L+QPS +GME GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM K
Sbjct: 258 RCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSK 317
Query: 182 EITALAPSTMKIKIIAPPERKY 247
EITALAPS+MKIK++APPERKY
Sbjct: 318 EITALAPSSMKIKVVAPPERKY 339
Score = 74.5 bits (175), Expect = 5e-14
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
IGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 343 IGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 150 bits (364), Expect = 7e-37
Identities = 68/82 (82%), Positives = 73/82 (89%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
RCPE LFQPS +GME GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+ GI DRM K
Sbjct: 258 RCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSK 317
Query: 182 EITALAPSTMKIKIIAPPERKY 247
EITALAPS+MKIK++APPERKY
Sbjct: 318 EITALAPSSMKIKVVAPPERKY 339
Score = 74.5 bits (175), Expect = 5e-14
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
IGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 343 IGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 150 bits (364), Expect = 7e-37
Identities = 68/82 (82%), Positives = 73/82 (89%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
RCPE LFQPS +GME GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+ GI DRM K
Sbjct: 258 RCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSK 317
Query: 182 EITALAPSTMKIKIIAPPERKY 247
EITALAPS+MKIK++APPERKY
Sbjct: 318 EITALAPSSMKIKVVAPPERKY 339
Score = 74.5 bits (175), Expect = 5e-14
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
IGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 343 IGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 150 bits (363), Expect = 9e-37
Identities = 67/82 (81%), Positives = 72/82 (87%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
RCPE LFQ S +GME GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM K
Sbjct: 259 RCPEVLFQTSLIGMETSGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMNK 318
Query: 182 EITALAPSTMKIKIIAPPERKY 247
EI ALAP +MKIK++APPERKY
Sbjct: 319 EINALAPPSMKIKVVAPPERKY 340
Score = 61.3 bits (142), Expect = 5e-10
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
+GGSILASLS+F MWI+K EYDE G +IVHRKCF
Sbjct: 344 VGGSILASLSSFAPMWITKAEYDEQGGAIVHRKCF 378
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 136 bits (330), Expect = 9e-33
Identities = 62/82 (75%), Positives = 68/82 (82%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
RCPE LFQPS +GME GIHE TYNSIMKCD DIRKDLY N VLSGGTTM+ GI +RM K
Sbjct: 210 RCPEVLFQPSLIGMETSGIHEKTYNSIMKCDDDIRKDLYGNIVLSGGTTMFRGIEERMTK 269
Query: 182 EITALAPSTMKIKIIAPPERKY 247
EI ALA + M+IKI+APPERKY
Sbjct: 270 EINALAAANMRIKIVAPPERKY 291
Score = 65.7 bits (153), Expect = 2e-11
Identities = 27/35 (77%), Positives = 33/35 (94%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
IGGSILASLST++QMWI+K EY+E+GP+IVH KCF
Sbjct: 295 IGGSILASLSTYEQMWITKAEYEENGPAIVHTKCF 329
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 113 bits (272), Expect = 9e-26
Identities = 47/78 (60%), Positives = 61/78 (78%)
Frame = +2
Query: 5 CPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 184
CPE LFQPS +G E+ GIHE T NSI+KC VD R+D+Y N +++GGTTM GI +RM KE
Sbjct: 248 CPEVLFQPSVIGKESSGIHEATRNSILKCPVDTRRDMYGNILMTGGTTMLHGIKERMTKE 307
Query: 185 ITALAPSTMKIKIIAPPE 238
+ AL PS+MK+K++ PPE
Sbjct: 308 LNALVPSSMKVKVVVPPE 325
Score = 62.5 bits (145), Expect = 2e-10
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 357
IGGSILASLSTF QMWI+K EY+E G +IVHRKC
Sbjct: 332 IGGSILASLSTFHQMWITKDEYEEHGAAIVHRKC 365
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 64.9 bits (151), Expect = 4e-11
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
+ PEALF P + +E G+ + + I + D+D R LY + VLSGG+TMYPG+ R++K
Sbjct: 257 QAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEK 316
Query: 182 EI 187
EI
Sbjct: 317 EI 318
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 60.5 bits (140), Expect = 9e-10
Identities = 26/72 (36%), Positives = 43/72 (59%)
Frame = +2
Query: 8 PEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 187
PE LFQP+ LGM G+ E +I C ++ LY + +L+GG+T++P + +R++ E+
Sbjct: 303 PETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFPQLKERLEGEL 362
Query: 188 TALAPSTMKIKI 223
L P +KI
Sbjct: 363 RPLVPDHFDVKI 374
Score = 34.3 bits (75), Expect = 0.069
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 259 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
GGS+LAS F+ M ++K EY+E G + R+ F
Sbjct: 387 GGSLLASSPDFESMCVTKAEYEELGSARCRRRFF 420
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 58.8 bits (136), Expect = 3e-09
Identities = 33/76 (43%), Positives = 40/76 (52%)
Frame = +2
Query: 11 EALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 190
EALFQPS LG+E GI E I + + L NTVL GGTT G R QKE
Sbjct: 242 EALFQPSILGLEEHGIVEQLVRIISTVSSENHRQLLENTVLCGGTTSMTGFESRFQKEAN 301
Query: 191 ALAPSTMKIKIIAPPE 238
L S ++ ++ PPE
Sbjct: 302 -LCSSAIRPTLVKPPE 316
Score = 48.4 bits (110), Expect = 4e-06
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
+GG+ILA + Q ++K +YDE+GPS+VHRKCF
Sbjct: 329 VGGAILAKVVFPQNQHVTKADYDETGPSVVHRKCF 363
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 56.4 bits (130), Expect = 1e-08
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 357
IGGSILASL +FQQMW SK EY+E G S + RKC
Sbjct: 407 IGGSILASLGSFQQMWFSKSEYEEHGASYIQRKC 440
Score = 55.2 bits (127), Expect = 3e-08
Identities = 28/88 (31%), Positives = 52/88 (59%), Gaps = 12/88 (13%)
Frame = +2
Query: 2 RCPEALFQPSFL----GMEAC--------GIHETTYNSIMKCDVDIRKDLYANTVLSGGT 145
+ P+ +F PS + GME G+ SI KCDVDIR++LY++ +L+GGT
Sbjct: 307 KVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCDVDIRRELYSSILLAGGT 366
Query: 146 TMYPGIADRMQKEITALAPSTMKIKIIA 229
+ + +R++K++ +P + ++K++A
Sbjct: 367 SSMQQLKERLEKDLIEESPHSARVKVLA 394
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Frame = +2
Query: 11 EALFQPSFLGMEACGIHETTYNSIMKCDV-DIRKD--LYANTVLSGGTTMYPGIADRMQK 181
E LFQP GM A +H+ + CD + D + VL+GG+ PG+++R+++
Sbjct: 354 EILFQPRLAGMRAMSLHQAVSLCMDHCDAAGLTGDDSWFKTVVLTGGSACLPGLSERLER 413
Query: 182 EITALAPSTMK--IKIIAPP 235
E+ PS++ I++I PP
Sbjct: 414 ELQDHLPSSISNGIRVIPPP 433
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 48.0 bits (109), Expect = 5e-06
Identities = 21/78 (26%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKC---DVDIRKDLYANTVLSGGTTMYPGIADR 172
RCPE LF P+ +G++ G+ E SI + + ++ + L ++ +++GG ++ PG+ +R
Sbjct: 597 RCPEILFHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCSLLPGMNER 656
Query: 173 MQKEITALAPSTMKIKII 226
++ I + P I ++
Sbjct: 657 LECGIRMIRPCGSPINVV 674
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 8 PEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 184
PE F P + + I +D R+ LY N VLSGG+TM+ R+Q++
Sbjct: 288 PEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKDFGRRLQRD 347
Query: 185 I 187
+
Sbjct: 348 L 348
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +1
Query: 181 GNHSSRPIDNED*DHCSSREEVLRMIGGSILASLSTFQQMWISKQEYDESGPSI 342
G +S+P++ H R V GGS+L+S F +K+EY+E G SI
Sbjct: 365 GEITSQPVEVNVVSHPVQRFAV--WFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 32.7 bits (71), Expect = 0.21
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = +2
Query: 56 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 235
I E Y I++ + KD Y N+ G + +YP ++K+ L ++ K + PP
Sbjct: 336 IRELIYREILEYHPQLLKD-YMNS--EGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPP 392
Query: 236 ERKY 247
+RK+
Sbjct: 393 DRKH 396
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 44 EACGIHETTYNSIMKCD-VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 220
E G+ E +SI+ +D+R+ L+++ L GG + G+ +++ + P T I
Sbjct: 458 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 517
Query: 221 II 226
+
Sbjct: 518 TV 519
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 44 EACGIHETTYNSIMKCD-VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 220
E G+ E +SI+ +D+R+ L+++ L GG + G+ +++ + P T I
Sbjct: 470 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 529
Query: 221 II 226
+
Sbjct: 530 TV 531
>At1g53510.1 68414.m06068 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK18) mitogen-activated protein
kinase (MAPK)(AtMPK18), PMID:12119167
Length = 603
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/64 (23%), Positives = 30/64 (46%)
Frame = +2
Query: 56 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 235
I E Y I++ + KD + + G +YP ++++ T L ++ + + P
Sbjct: 336 IRELIYREILEYHPQLLKDYMSGS--EGSNFVYPSAIGHLRQQFTYLEENSSRNGPVIPL 393
Query: 236 ERKY 247
ERK+
Sbjct: 394 ERKH 397
>At1g05580.1 68414.m00578 cation/hydrogen exchanger, putative
(CHX23) monovalent cation:proton antiporter family 2
(CPA2) member, PMID:11500563
Length = 867
Score = 27.5 bits (58), Expect = 7.9
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = -2
Query: 243 FLSGGAMILIFIVDGARAVISFCIRSAIPGYMVVPPDNTVLAYKSLRMSTSHFM 82
FLSG M L +I+ G RA I F ++ MVV ++ L + TS FM
Sbjct: 333 FLSGILMPLFYIICGLRADIGFMLQFTDKFMMVVVICSSFLVKIVTTVITSLFM 386
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,822,362
Number of Sequences: 28952
Number of extensions: 270350
Number of successful extensions: 740
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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