Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0197.Seq
(788 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 186 1e-47
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 186 1e-47
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 186 1e-47
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 186 1e-47
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 113 1e-25
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 97 9e-21
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 66 2e-11
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 66 3e-11
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 38 0.006
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 38 0.006
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 38 0.008
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 38 0.010
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 35 0.071
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 33 0.16
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 33 0.16
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 33 0.22
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 33 0.22
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.29
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.29
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.29
At1g21630.1 68414.m02708 calcium-binding EF hand family protein ... 31 0.66
At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 31 0.87
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 31 1.2
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.5
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 30 1.5
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 2.0
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 2.0
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.7
At3g50370.1 68416.m05508 expressed protein 28 6.1
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 6.1
At5g62410.1 68418.m07832 SMC2-like condensin, putative (SMC2) (T... 28 8.1
At1g14020.1 68414.m01656 expressed protein contains Pfam PF03138... 28 8.1
At1g12570.1 68414.m01459 glucose-methanol-choline (GMC) oxidored... 28 8.1
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 186 bits (453), Expect = 1e-47
Identities = 101/173 (58%), Positives = 118/173 (68%)
Frame = +1
Query: 256 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 435
ALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTRE
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 135
Query: 436 HALLAFTLGVKQLIVGVNKMDSTEHHTVSPDLRKSRRKYPHTFKKIGYNPAAVAFVPISG 615
HALLAFTLGVKQ+I NKMD+T + ++ KK+GYNP + FVPISG
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISG 195
Query: 616 WHGDNMLEPSTKMLGSXDGSGA*GRPS*XEMPH*SLDAILPTARPTDKPXVFP 774
+ GDNM+E ST L G P+ E +LD I RP+DKP P
Sbjct: 196 FEGDNMIERSTN-LDWYKG------PTLLE----ALDQINEPKRPSDKPLRLP 237
Score = 130 bits (313), Expect = 1e-30
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 212
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 213 DKLKAERE 236
DKLKAERE
Sbjct: 61 DKLKAERE 68
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 186 bits (453), Expect = 1e-47
Identities = 101/173 (58%), Positives = 118/173 (68%)
Frame = +1
Query: 256 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 435
ALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTRE
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 135
Query: 436 HALLAFTLGVKQLIVGVNKMDSTEHHTVSPDLRKSRRKYPHTFKKIGYNPAAVAFVPISG 615
HALLAFTLGVKQ+I NKMD+T + ++ KK+GYNP + FVPISG
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISG 195
Query: 616 WHGDNMLEPSTKMLGSXDGSGA*GRPS*XEMPH*SLDAILPTARPTDKPXVFP 774
+ GDNM+E ST L G P+ E +LD I RP+DKP P
Sbjct: 196 FEGDNMIERSTN-LDWYKG------PTLLE----ALDQINEPKRPSDKPLRLP 237
Score = 130 bits (313), Expect = 1e-30
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 212
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 213 DKLKAERE 236
DKLKAERE
Sbjct: 61 DKLKAERE 68
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 186 bits (453), Expect = 1e-47
Identities = 101/173 (58%), Positives = 118/173 (68%)
Frame = +1
Query: 256 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 435
ALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTRE
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 135
Query: 436 HALLAFTLGVKQLIVGVNKMDSTEHHTVSPDLRKSRRKYPHTFKKIGYNPAAVAFVPISG 615
HALLAFTLGVKQ+I NKMD+T + ++ KK+GYNP + FVPISG
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISG 195
Query: 616 WHGDNMLEPSTKMLGSXDGSGA*GRPS*XEMPH*SLDAILPTARPTDKPXVFP 774
+ GDNM+E ST L G P+ E +LD I RP+DKP P
Sbjct: 196 FEGDNMIERSTN-LDWYKG------PTLLE----ALDQINEPKRPSDKPLRLP 237
Score = 130 bits (313), Expect = 1e-30
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 212
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 213 DKLKAERE 236
DKLKAERE
Sbjct: 61 DKLKAERE 68
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 186 bits (453), Expect = 1e-47
Identities = 101/173 (58%), Positives = 118/173 (68%)
Frame = +1
Query: 256 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 435
ALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTRE
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 135
Query: 436 HALLAFTLGVKQLIVGVNKMDSTEHHTVSPDLRKSRRKYPHTFKKIGYNPAAVAFVPISG 615
HALLAFTLGVKQ+I NKMD+T + ++ KK+GYNP + FVPISG
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISG 195
Query: 616 WHGDNMLEPSTKMLGSXDGSGA*GRPS*XEMPH*SLDAILPTARPTDKPXVFP 774
+ GDNM+E ST L G P+ E +LD I RP+DKP P
Sbjct: 196 FEGDNMIERSTN-LDWYKG------PTLLE----ALDQINEPKRPSDKPLRLP 237
Score = 130 bits (313), Expect = 1e-30
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +3
Query: 33 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 212
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 213 DKLKAERE 236
DKLKAERE
Sbjct: 61 DKLKAERE 68
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 113 bits (272), Expect = 1e-25
Identities = 60/123 (48%), Positives = 74/123 (60%), Gaps = 1/123 (0%)
Frame = +1
Query: 268 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 447
FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + GQTREH L
Sbjct: 174 FETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQL 233
Query: 448 AFTLGVKQLIVGVNKMDSTEHHTVSPDLRKSRRKYPHTFKKIGYNPAA-VAFVPISGWHG 624
A TLGV +LIV VNKMD + + +K K GYN V F+PISG G
Sbjct: 234 AKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGYNTKKDVVFLPISGLMG 293
Query: 625 DNM 633
NM
Sbjct: 294 KNM 296
Score = 68.1 bits (159), Expect = 6e-12
Identities = 28/64 (43%), Positives = 46/64 (71%)
Frame = +3
Query: 42 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 221
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 222 KAER 233
+ ER
Sbjct: 158 EEER 161
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 97.5 bits (232), Expect = 9e-21
Identities = 49/134 (36%), Positives = 78/134 (58%), Gaps = 2/134 (1%)
Frame = +1
Query: 268 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK-NGQTREHAL 444
F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG GQTREHA
Sbjct: 312 FNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQTREHAR 371
Query: 445 LAFTLGVKQLIVGVNKMDSTEHHTVSPDLRKSRRKYPHTFKKIGYNPAAVAFVPISGWHG 624
+ GV+Q+IV +NKMD + DL K + + + +++ ++P+S
Sbjct: 372 VLRGFGVEQVIVAINKMDIVGYSKERFDLIK--QHVGSFLQSCRFKDSSLTWIPLSAMEN 429
Query: 625 DNML-EPSTKMLGS 663
N++ PS L S
Sbjct: 430 QNLVAAPSDNRLSS 443
Score = 77.4 bits (182), Expect = 1e-14
Identities = 32/63 (50%), Positives = 46/63 (73%)
Frame = +3
Query: 48 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 227
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 228 ERE 236
ERE
Sbjct: 298 ERE 300
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +1
Query: 265 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 444
++ET + +D PGH D++KNMITG +Q D A+L+V+ G QT+EH L
Sbjct: 136 EYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHIL 188
Query: 445 LAFTLGVKQLIVGVNKMDSTE 507
LA +GV ++V +NK D +
Sbjct: 189 LAKQVGVPDMVVFLNKEDQVD 209
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 30 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 164
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 65.7 bits (153), Expect = 3e-11
Identities = 32/78 (41%), Positives = 48/78 (61%)
Frame = +1
Query: 265 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 444
++ET+K + +D PGH D++KNMITG +Q D +L+V+ G QT+EH L
Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHIL 176
Query: 445 LAFTLGVKQLIVGVNKMD 498
LA +GV L+ +NK+D
Sbjct: 177 LARQVGVPSLVCFLNKVD 194
Score = 32.7 bits (71), Expect = 0.29
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 39 KEKTHINIVVIGHVDSGKSTTT 104
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +1
Query: 274 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 453
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 454 TLGVKQLIVGVNKMD 498
+ +K +I+ NK+D
Sbjct: 178 MMRLKHIIILQNKID 192
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +1
Query: 274 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 453
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 454 TLGVKQLIVGVNKMD 498
+ +K +I+ NK+D
Sbjct: 178 MMRLKHIIILQNKID 192
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 37.9 bits (84), Expect = 0.008
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +1
Query: 268 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 435
FE SK +V+ +D PGH + M+ G + D A+L++AA QT E
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 436 HALLAFTLGVKQLIVGVNKMD 498
H + +K +I+ NK+D
Sbjct: 166 HLAAVEIMQLKHIIILQNKID 186
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +1
Query: 286 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 465
+V+ +D PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 466 KQLIVGVNKMD 498
K +I+ NK+D
Sbjct: 174 KDIIIIQNKID 184
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 34.7 bits (76), Expect = 0.071
Identities = 28/93 (30%), Positives = 42/93 (45%)
Frame = +1
Query: 271 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 450
E S Y + +ID PGH DF + S A+L+V A G QT + LA
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG-------VQAQTVANFYLA 183
Query: 451 FTLGVKQLIVGVNKMDSTEHHTVSPDLRKSRRK 549
F + ++ +NK+D T P+ K++ K
Sbjct: 184 FEANL-TIVPVINKIDQP---TADPERVKAQLK 212
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 21 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK 140
D K EK N +I H+D GKST L+ G I K
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 274 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
+ Y I+D PGH +F M AD AVLIV A G
Sbjct: 206 SKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 274 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
+ Y I+D PGH +F M AD AVLIV A G
Sbjct: 206 SKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +1
Query: 253 YALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 432
Y WK Y V IID PGH DF + D A+L++ + G I+ + Q R
Sbjct: 127 YCTWK----DYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMR 182
Query: 433 EH 438
+
Sbjct: 183 RY 184
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCGGI 134
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +1
Query: 253 YALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 432
Y WK Y V IID PGH DF + D A+L++ + G I+ + Q R
Sbjct: 127 YCTWK----DYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMR 182
Query: 433 EH 438
+
Sbjct: 183 RY 184
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCGGI 134
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 289 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 32.7 bits (71), Expect = 0.29
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCGG 131
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 283 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 74 YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 32.7 bits (71), Expect = 0.29
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 45 KTHINIVVIGHVDSGKSTTTGHLIYKCG 128
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At1g21630.1 68414.m02708 calcium-binding EF hand family protein
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain; ESTs gb|T44428 and gb|AA395440 come from this
gene
Length = 1218
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/64 (28%), Positives = 25/64 (39%)
Frame = -3
Query: 774 GKDXGLVSGPGSWQDGIETSMRHFXSAWPSLRSTAIX*TKHFG*RLQHVVSVPSRNGHES 595
GK LV P WQ GI+ + W L K +Q+V++ P E
Sbjct: 741 GKPTSLVELPFGWQPGIQEGAADWDEDWDKLEDEGFTFVKELTLDIQNVIAPPK----EK 796
Query: 594 DSSW 583
S+W
Sbjct: 797 SSAW 800
>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 319
Score = 31.1 bits (67), Expect = 0.87
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +1
Query: 298 IDAPGHRDFIKNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 474
I GH D+ + T Q +C + L+V TG F +KNG R+ LG +
Sbjct: 226 IKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAELE 285
Query: 475 IVGVNKMDSTEHHTV 519
+ +DS E V
Sbjct: 286 NLSTFTLDSDEEDEV 300
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 268 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
+E + + + +ID PGH DF + + + A+L+V A G
Sbjct: 147 YEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 155
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +1
Query: 295 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 474
+ID PGH F G+S D A+L+V + + G+ QT E +L + +
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756
Query: 475 IVGVNKMD 498
I+ +NK+D
Sbjct: 757 IIALNKVD 764
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +1
Query: 289 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 468
+ +ID PGH F G++ D A+L+V + G+ QT E L VK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610
Query: 469 QLIVGVNKMD 498
I+ +NK+D
Sbjct: 611 -FIIALNKVD 619
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 295 IIDAPGHRDFIKNMITGTSQADCAVLIV 378
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 295 IIDAPGHRDFIKNMITGTSQADCAVLIV 378
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 277 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 378
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 57 NIVVIGHVDSGKSTTTGHLIYKCG 128
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At3g50370.1 68416.m05508 expressed protein
Length = 2179
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -1
Query: 740 VGRMASRLQ*GISXQLGLPYAP--LPSXEPSILVEGSNMLSPCHPEMGTKAT 591
V +++++ + Q GL P +PS P+I + M P HP+ G+ T
Sbjct: 1124 VSTTSAQMEEPVKFQFGLFSGPSLIPSPFPAIQIGSIQMPLPLHPQFGSSLT 1175
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +1
Query: 298 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 477
+D PGH F G D A+++VAA G QT E A+ ++
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG-------IRPQTNE-AIAHAKAAAVPIV 608
Query: 478 VGVNKMD 498
+ +NK+D
Sbjct: 609 IAINKID 615
>At5g62410.1 68418.m07832 SMC2-like condensin, putative (SMC2)
(TITAN3) very strong similarity to SMC2-like condensin
(TITAN3) [Arabidopsis thaliana] GI:14279543; contains
Pfam profiles PF02483: SMC family C-terminal domain,
PF02463: RecF/RecN/SMC N terminal domain
Length = 1175
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +3
Query: 126 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAEREXVSQSICSLE 266
GG K EK + AQEM + S K D L E+E V + + S+E
Sbjct: 293 GGEVKTLSEKVDSLAQEMTRESSKLNNKEDTLLGEKENVEKIVHSIE 339
>At1g14020.1 68414.m01656 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown; previously annotated as
'growth regulator protein -related' based on similarity
to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana
tabacum], which, due to scienitific fraud was retracted.
Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908.
PMID:10400497.
Length = 499
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 159 EKEAQEMGKGSFKYAWVLDKLKAEREXVSQSICSL 263
E+EA+E+ K + Y W +K E +Q +C L
Sbjct: 280 EEEAEELKKMRYTYPWWREKEIVSEERRAQGLCPL 314
>At1g12570.1 68414.m01459 glucose-methanol-choline (GMC)
oxidoreductase family protein similar to mandelonitrile
lyase from Prunus serotina [SP|P52706, SP|P52707];
contains Pfam profile PF00732 GMC oxidoreductase
Length = 572
Score = 27.9 bits (59), Expect = 8.1
Identities = 32/125 (25%), Positives = 48/125 (38%), Gaps = 4/125 (3%)
Frame = +1
Query: 244 HNRYALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 423
H L ++ K ++ A HR + GT++ ++ TG+ K G
Sbjct: 211 HTAADLLEYADPKGITVLLHATVHRILFRTR--GTTKPIANGVVYRDRTGQAHRAYLKEG 268
Query: 424 QTREHALLAFTLGVKQLI----VGVNKMDSTEHHTVSPDLRKSRRKYPHTFKKIGYNPAA 591
E L A TLG QL+ VG + ++ TV D PH + + NP
Sbjct: 269 ALSEIILSAGTLGSPQLLMLSGVGPSAQLQAQNITVVMD-------QPHVGQGMYDNPMN 321
Query: 592 VAFVP 606
FVP
Sbjct: 322 AVFVP 326
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,456,576
Number of Sequences: 28952
Number of extensions: 373510
Number of successful extensions: 1198
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1775300800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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