Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0064
(499 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 153 8e-38
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 151 2e-37
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 150 4e-37
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 150 4e-37
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 150 4e-37
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 149 8e-37
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 149 8e-37
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 144 2e-35
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 144 3e-35
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 90 7e-19
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 86 1e-17
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 86 1e-17
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 79 1e-15
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 79 1e-15
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 79 1e-15
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 79 1e-15
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 62 2e-10
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 62 2e-10
At3g21420.1 68416.m02703 oxidoreductase, 2OG-Fe(II) oxygenase fa... 30 0.75
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 153 bits (370), Expect = 8e-38
Identities = 68/89 (76%), Positives = 78/89 (87%)
Frame = +1
Query: 1 TMSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTL 180
TMSG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GF PLTSRG+QQYRALTVPELT
Sbjct: 232 TMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQ 291
Query: 181 QMFDAKNMMVACDPRHGRYLTVATISGGE 267
QM+DAKNMM A DPRHGRYLT + + G+
Sbjct: 292 QMWDAKNMMCAADPRHGRYLTASAMFRGK 320
Score = 97.1 bits (231), Expect = 6e-21
Identities = 46/76 (60%), Positives = 53/76 (69%)
Frame = +3
Query: 255 FRGRMSMKEVXEQLANIQXXNSTYFVXXIPNNCKIAVCXIPPRGLXXASTFIGNTXGIQT 434
FRG+MS KEV EQ+ N+Q NS+YFV IPNN K VC IPP GL ASTFIGN+ IQ
Sbjct: 317 FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQE 376
Query: 435 IFXKVSEQFVXXSRXK 482
+F +VSEQF R K
Sbjct: 377 MFRRVSEQFTAMFRRK 392
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 151 bits (367), Expect = 2e-37
Identities = 67/89 (75%), Positives = 78/89 (87%)
Frame = +1
Query: 1 TMSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTL 180
TMSG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GF PLTSRG+QQYRALTVPELT
Sbjct: 232 TMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQ 291
Query: 181 QMFDAKNMMVACDPRHGRYLTVATISGGE 267
QM+D+KNMM A DPRHGRYLT + + G+
Sbjct: 292 QMWDSKNMMCAADPRHGRYLTASAMFRGK 320
Score = 96.7 bits (230), Expect = 8e-21
Identities = 46/76 (60%), Positives = 54/76 (71%)
Frame = +3
Query: 255 FRGRMSMKEVXEQLANIQXXNSTYFVXXIPNNCKIAVCXIPPRGLXXASTFIGNTXGIQT 434
FRG+MS KEV EQ+ N+Q NS+YFV IPNN K +VC I PRGL ASTFIGN+ IQ
Sbjct: 317 FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRGLSMASTFIGNSTSIQE 376
Query: 435 IFXKVSEQFVXXSRXK 482
+F +VSEQF R K
Sbjct: 377 MFRRVSEQFTAMFRRK 392
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 150 bits (364), Expect = 4e-37
Identities = 66/89 (74%), Positives = 78/89 (87%)
Frame = +1
Query: 1 TMSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTL 180
TMSG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GF PLTSRG+QQYR+LTVPELT
Sbjct: 232 TMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQ 291
Query: 181 QMFDAKNMMVACDPRHGRYLTVATISGGE 267
QM+D+KNMM A DPRHGRYLT + + G+
Sbjct: 292 QMWDSKNMMCAADPRHGRYLTASAMFRGK 320
Score = 97.1 bits (231), Expect = 6e-21
Identities = 46/76 (60%), Positives = 53/76 (69%)
Frame = +3
Query: 255 FRGRMSMKEVXEQLANIQXXNSTYFVXXIPNNCKIAVCXIPPRGLXXASTFIGNTXGIQT 434
FRG+MS KEV EQ+ N+Q NS+YFV IPNN K VC IPP GL ASTFIGN+ IQ
Sbjct: 317 FRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQE 376
Query: 435 IFXKVSEQFVXXSRXK 482
+F +VSEQF R K
Sbjct: 377 MFRRVSEQFTAMFRRK 392
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 150 bits (364), Expect = 4e-37
Identities = 66/89 (74%), Positives = 78/89 (87%)
Frame = +1
Query: 1 TMSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTL 180
TMSG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GF PLTSRG+QQYR+LTVPELT
Sbjct: 232 TMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQ 291
Query: 181 QMFDAKNMMVACDPRHGRYLTVATISGGE 267
QM+D+KNMM A DPRHGRYLT + + G+
Sbjct: 292 QMWDSKNMMCAADPRHGRYLTASAMFRGK 320
Score = 97.1 bits (231), Expect = 6e-21
Identities = 46/76 (60%), Positives = 53/76 (69%)
Frame = +3
Query: 255 FRGRMSMKEVXEQLANIQXXNSTYFVXXIPNNCKIAVCXIPPRGLXXASTFIGNTXGIQT 434
FRG+MS KEV EQ+ N+Q NS+YFV IPNN K VC IPP GL ASTFIGN+ IQ
Sbjct: 317 FRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQE 376
Query: 435 IFXKVSEQFVXXSRXK 482
+F +VSEQF R K
Sbjct: 377 MFRRVSEQFTAMFRRK 392
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 150 bits (364), Expect = 4e-37
Identities = 67/89 (75%), Positives = 77/89 (86%)
Frame = +1
Query: 1 TMSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTL 180
TMSG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GF PLTSRG+QQYR LTVPELT
Sbjct: 232 TMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQ 291
Query: 181 QMFDAKNMMVACDPRHGRYLTVATISGGE 267
QM+DAKNMM A DPRHGRYLT + + G+
Sbjct: 292 QMWDAKNMMCAADPRHGRYLTASAMFRGK 320
Score = 97.1 bits (231), Expect = 6e-21
Identities = 46/76 (60%), Positives = 53/76 (69%)
Frame = +3
Query: 255 FRGRMSMKEVXEQLANIQXXNSTYFVXXIPNNCKIAVCXIPPRGLXXASTFIGNTXGIQT 434
FRG+MS KEV EQ+ N+Q NS+YFV IPNN K VC IPP GL ASTFIGN+ IQ
Sbjct: 317 FRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQE 376
Query: 435 IFXKVSEQFVXXSRXK 482
+F +VSEQF R K
Sbjct: 377 MFRRVSEQFTAMFRRK 392
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 149 bits (362), Expect = 8e-37
Identities = 66/89 (74%), Positives = 77/89 (86%)
Frame = +1
Query: 1 TMSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTL 180
TMSG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GF PLTSRG+QQY AL+VPELT
Sbjct: 232 TMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQ 291
Query: 181 QMFDAKNMMVACDPRHGRYLTVATISGGE 267
QM+DAKNMM A DPRHGRYLT + + G+
Sbjct: 292 QMWDAKNMMCAADPRHGRYLTASAVFRGK 320
Score = 94.7 bits (225), Expect = 3e-20
Identities = 45/76 (59%), Positives = 54/76 (71%)
Frame = +3
Query: 255 FRGRMSMKEVXEQLANIQXXNSTYFVXXIPNNCKIAVCXIPPRGLXXASTFIGNTXGIQT 434
FRG++S KEV EQ+ NIQ NS+YFV IPNN K +VC I P+GL ASTFIGN+ IQ
Sbjct: 317 FRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSVCDIAPKGLKMASTFIGNSTSIQE 376
Query: 435 IFXKVSEQFVXXSRXK 482
+F +VSEQF R K
Sbjct: 377 MFRRVSEQFTAMFRRK 392
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 149 bits (362), Expect = 8e-37
Identities = 66/89 (74%), Positives = 77/89 (86%)
Frame = +1
Query: 1 TMSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTL 180
TMSG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GF PLTSRG+QQY AL+VPELT
Sbjct: 232 TMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQ 291
Query: 181 QMFDAKNMMVACDPRHGRYLTVATISGGE 267
QM+DAKNMM A DPRHGRYLT + + G+
Sbjct: 292 QMWDAKNMMCAADPRHGRYLTASAVFRGK 320
Score = 94.3 bits (224), Expect = 4e-20
Identities = 45/76 (59%), Positives = 53/76 (69%)
Frame = +3
Query: 255 FRGRMSMKEVXEQLANIQXXNSTYFVXXIPNNCKIAVCXIPPRGLXXASTFIGNTXGIQT 434
FRG+MS KEV EQ+ N+Q NS+YFV IPNN K +VC I P GL ASTFIGN+ IQ
Sbjct: 317 FRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIAPTGLKMASTFIGNSTSIQE 376
Query: 435 IFXKVSEQFVXXSRXK 482
+F +VSEQF R K
Sbjct: 377 MFRRVSEQFTAMFRRK 392
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 144 bits (350), Expect = 2e-35
Identities = 65/89 (73%), Positives = 76/89 (85%)
Frame = +1
Query: 1 TMSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTL 180
TMSG+T LRFPGQLN+DLRKLAVN++PFPRLHF+ GF PLTSRG+QQY +LTVPELT
Sbjct: 233 TMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQ 292
Query: 181 QMFDAKNMMVACDPRHGRYLTVATISGGE 267
QM+D+KNMM A DPRHGRYLT + I G+
Sbjct: 293 QMWDSKNMMCAADPRHGRYLTASAIFRGQ 321
Score = 97.1 bits (231), Expect = 6e-21
Identities = 45/76 (59%), Positives = 55/76 (72%)
Frame = +3
Query: 255 FRGRMSMKEVXEQLANIQXXNSTYFVXXIPNNCKIAVCXIPPRGLXXASTFIGNTXGIQT 434
FRG+MS KEV EQ+ NIQ NS+YFV IPNN K +VC IPP+GL A+TF+GN+ IQ
Sbjct: 318 FRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMAATFVGNSTSIQE 377
Query: 435 IFXKVSEQFVXXSRXK 482
+F +VSEQF R K
Sbjct: 378 MFRRVSEQFTAMFRRK 393
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 144 bits (349), Expect = 3e-35
Identities = 65/89 (73%), Positives = 76/89 (85%)
Frame = +1
Query: 1 TMSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTL 180
TMSG+T LRFPGQLN+DLRKLAVN++PFPRLHF+ GF PLTSRG+QQY +LTVPELT
Sbjct: 233 TMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQ 292
Query: 181 QMFDAKNMMVACDPRHGRYLTVATISGGE 267
QM+DAKNMM A DPRHGRYLT + + G+
Sbjct: 293 QMWDAKNMMCAADPRHGRYLTASAMFRGK 321
Score = 96.3 bits (229), Expect = 1e-20
Identities = 44/76 (57%), Positives = 54/76 (71%)
Frame = +3
Query: 255 FRGRMSMKEVXEQLANIQXXNSTYFVXXIPNNCKIAVCXIPPRGLXXASTFIGNTXGIQT 434
FRG+MS KEV EQ+ N+Q NS+YFV IPNN K +VC IPP G+ ASTF+GN+ IQ
Sbjct: 318 FRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPTGIKMASTFVGNSTSIQE 377
Query: 435 IFXKVSEQFVXXSRXK 482
+F +VSEQF R K
Sbjct: 378 MFRRVSEQFTAMFRRK 393
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 90.2 bits (214), Expect = 7e-19
Identities = 36/93 (38%), Positives = 56/93 (60%)
Frame = +1
Query: 1 TMSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTL 180
T+S +TT LRF G +N D+ + N+VP+PR+HF + P+ S + +VPE+T
Sbjct: 234 TISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITT 293
Query: 181 QMFDAKNMMVACDPRHGRYLTVATISGGECL*K 279
+F+ NMM CDPRHG+Y+ + G+ + K
Sbjct: 294 SVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPK 326
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 86.2 bits (204), Expect = 1e-17
Identities = 35/92 (38%), Positives = 56/92 (60%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S +TT LRF G +N D+ + N+VP+PR+HF + P+ S + L+VPE+T
Sbjct: 235 ISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNA 294
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*K 279
+F+ +MM CDPRHG+Y+ + G+ + K
Sbjct: 295 VFEPASMMAKCDPRHGKYMACCLMYRGDVVPK 326
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 86.2 bits (204), Expect = 1e-17
Identities = 35/92 (38%), Positives = 56/92 (60%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S +TT LRF G +N D+ + N+VP+PR+HF + P+ S + L+VPE+T
Sbjct: 235 ISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNA 294
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*K 279
+F+ +MM CDPRHG+Y+ + G+ + K
Sbjct: 295 VFEPASMMAKCDPRHGKYMACCLMYRGDVVPK 326
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 79.4 bits (187), Expect = 1e-15
Identities = 34/92 (36%), Positives = 53/92 (57%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S +T LRF G LN D+ + N+VP+PR+HF + P+ S + L+V E+T
Sbjct: 235 ISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNS 294
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*K 279
F+ +MM CDPRHG+Y+ + G+ + K
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPK 326
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 79.4 bits (187), Expect = 1e-15
Identities = 34/92 (36%), Positives = 53/92 (57%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S +T LRF G LN D+ + N+VP+PR+HF + P+ S + L+V E+T
Sbjct: 235 ISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNS 294
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*K 279
F+ +MM CDPRHG+Y+ + G+ + K
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPK 326
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 79.4 bits (187), Expect = 1e-15
Identities = 34/92 (36%), Positives = 53/92 (57%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S +T LRF G LN D+ + N+VP+PR+HF + P+ S + L+V E+T
Sbjct: 235 ISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNS 294
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*K 279
F+ +MM CDPRHG+Y+ + G+ + K
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPK 326
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 79.4 bits (187), Expect = 1e-15
Identities = 34/92 (36%), Positives = 53/92 (57%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLTSRGAQQYRALTVPELTLQ 183
+S +T LRF G LN D+ + N+VP+PR+HF + P+ S + L+V E+T
Sbjct: 235 ISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNS 294
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*K 279
F+ +MM CDPRHG+Y+ + G+ + K
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPK 326
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 62.5 bits (145), Expect = 2e-10
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLT-SRGAQQYRALTVPELTL 180
MS TT LR+PG +N DL L +++P PR HF G+ PLT R A R TV ++
Sbjct: 236 MSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMR 295
Query: 181 QMFDAKNMMVACDPRH-----GRYLTVATISGGE 267
++ KN+MV+ R+ +Y+++ I GE
Sbjct: 296 RLLQTKNIMVSSYARNKEASQAKYISILNIIQGE 329
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 62.5 bits (145), Expect = 2e-10
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFXPLT-SRGAQQYRALTVPELTL 180
MS TT LR+PG +N DL L +++P PR HF G+ PLT R A R TV ++
Sbjct: 236 MSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMR 295
Query: 181 QMFDAKNMMVACDPRH-----GRYLTVATISGGE 267
++ KN+MV+ R+ +Y+++ I GE
Sbjct: 296 RLLQTKNIMVSSYARNKEASQAKYISILNIIQGE 329
>At3g21420.1 68416.m02703 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to SP|Q9ZWQ9 Flavonol synthase
(EC 1.14.11.-) {Citrus unshiu}; contains Pfam profile
PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family
Length = 364
Score = 30.3 bits (65), Expect = 0.75
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 111 RGVEMQARKRHHVHSQLPQISVQLSRKP 28
RGV + + K HH+H Q+P I + KP
Sbjct: 39 RGVVVSSLKTHHLHHQIPVIDLSKLSKP 66
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,062,475
Number of Sequences: 28952
Number of extensions: 148988
Number of successful extensions: 381
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 381
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 878448512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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