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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0053
         (548 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ...   116   1e-26
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ...   115   2e-26
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ...    99   2e-21
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)...    60   1e-09
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)...    60   1e-09
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E...    60   1e-09
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E...    60   1e-09
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E...    60   1e-09
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)...    60   1e-09
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ...    59   2e-09
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ...    59   2e-09
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id...    59   2e-09
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ...    59   2e-09
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ...    59   2e-09
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E...    58   3e-09
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro...    58   3e-09
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ...    55   3e-08
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ...    55   3e-08
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ...    55   3e-08
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ...    55   3e-08
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ...    55   3e-08
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ...    55   3e-08
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E...    54   6e-08
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E...    54   6e-08
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E...    54   6e-08
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E...    53   1e-07
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ...    48   5e-06
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E...    47   1e-05
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ...    46   1e-05
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)...    46   2e-05
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ...    46   2e-05
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)...    44   7e-05
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)...    42   4e-04
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ...    41   5e-04
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ...    41   6e-04
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ...    40   0.001
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)...    39   0.003
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ...    38   0.003
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E...    38   0.003
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E...    38   0.004
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E...    35   0.031
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro...    35   0.031
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro...    35   0.041
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro...    33   0.13 
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro...    33   0.13 
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si...    33   0.17 
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro...    33   0.17 
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro...    32   0.29 
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro...    31   0.38 
At5g03470.1 68418.m00303 serine/threonine protein phosphatase 2A...    31   0.51 
At2g39740.1 68415.m04880 expressed protein                             30   0.89 
At5g59460.1 68418.m07452 scarecrow-like transcription factor 11 ...    29   2.0  
At4g22400.1 68417.m03237 expressed protein                             29   2.7  
At3g60630.1 68416.m06784 scarecrow transcription factor family p...    29   2.7  
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro...    29   2.7  
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro...    29   2.7  
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)...    29   2.7  
At4g19190.1 68417.m02832 zinc knuckle (CCHC-type) family protein...    28   3.6  
At3g44610.1 68416.m04796 protein kinase family protein similar t...    28   4.7  
At5g54880.1 68418.m06836 DTW domain-containing protein contains ...    27   6.2  
At1g23670.2 68414.m02987 expressed protein contains Pfam profile...    27   6.2  
At1g23670.1 68414.m02986 expressed protein contains Pfam profile...    27   6.2  
At5g63810.1 68418.m08008 beta-galactosidase, putative / lactase,...    27   8.3  

>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
           similar to ubiquitin conjugating enzyme 6 from [Homo
           sapiens] GI:14029267, [Mus musculus] GI:14029263;
           contains Pfam profile PF00179: Ubiquitin-conjugating
           enzyme
          Length = 237

 Score =  116 bits (278), Expect = 1e-26
 Identities = 46/84 (54%), Positives = 64/84 (76%)
 Frame = +3

Query: 3   YLRLKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYM 182
           Y  L  +PV +V A P P++ILEWHYV++G E +P+ GG+Y+ KI FP E+P+KPP I M
Sbjct: 14  YRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITM 73

Query: 183 ITPNGRFKTNTRLCLSITDFHPDT 254
            TPNGRF T  ++CLS++DFHP++
Sbjct: 74  TTPNGRFMTQKKICLSMSDFHPES 97



 Score = 84.6 bits (200), Expect = 4e-17
 Identities = 46/105 (43%), Positives = 62/105 (59%)
 Frame = +2

Query: 137 YFPKGISVQTTFDLHDNTEWQVQDKHTIVPQYYRLSSGHWNPAWSISTILTGLLSFMLEK 316
           Y P GI++ T      N  +  Q K  +    +   S  WNP WS+S+ILTGLLSFM++ 
Sbjct: 66  YKPPGITMTTP-----NGRFMTQKKICLSMSDFHPES--WNPMWSVSSILTGLLSFMMDT 118

Query: 317 TPTLGSIETSEYQKRCLAAESLEINIKNKMFCELFPEYVEEIEQQ 451
           +PT GS+ T+  +K+ LA  SL  N K   F +LFPEYVE+  QQ
Sbjct: 119 SPTTGSVNTTVIEKQRLAKSSLAFNCKTPAFRKLFPEYVEKYNQQ 163


>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
           similar to ubiquitin conjugating enzyme 6 from [Homo
           sapiens] GI:14029267, [Mus musculus] GI:14029263;
           contains Pfam profile PF00179: Ubiquitin-conjugating
           enzyme
          Length = 243

 Score =  115 bits (277), Expect = 2e-26
 Identities = 46/84 (54%), Positives = 64/84 (76%)
 Frame = +3

Query: 3   YLRLKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYM 182
           Y  L  +PV +V A P P++ILEWHYV++G E +P+ GG+Y+ KI FP E+P+KPP I M
Sbjct: 14  YRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITM 73

Query: 183 ITPNGRFKTNTRLCLSITDFHPDT 254
            TPNGRF T  ++CLS++DFHP++
Sbjct: 74  TTPNGRFVTQKKICLSMSDFHPES 97



 Score = 87.4 bits (207), Expect = 6e-18
 Identities = 40/73 (54%), Positives = 52/73 (71%)
 Frame = +2

Query: 254 WNPAWSISTILTGLLSFMLEKTPTLGSIETSEYQKRCLAAESLEINIKNKMFCELFPEYV 433
           WNP WS+S+ILTGLLSFM++ +PT GS+ TS  +K+ LA  SL  N K+  F +LFPEYV
Sbjct: 98  WNPMWSVSSILTGLLSFMMDNSPTTGSVNTSVAEKQRLAKSSLAFNCKSVTFRKLFPEYV 157

Query: 434 EEIEQQLKQRQEA 472
           E+  QQ    +EA
Sbjct: 158 EKYSQQQVAEEEA 170


>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
           similar to Non-Canonical UBiquitin Conjugating Enzyme 1
           (NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
           GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
           profile PF00179: Ubiquitin-conjugating enzyme
          Length = 309

 Score = 99.1 bits (236), Expect = 2e-21
 Identities = 35/68 (51%), Positives = 53/68 (77%)
 Frame = +3

Query: 48  PVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITPNGRFKTNTRLCL 227
           P+  NI EW + ++GP  + +EGG YH +I  P ++PFKPPS  ++TPNGRF+TNT++CL
Sbjct: 35  PLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYPFKPPSFMLLTPNGRFETNTKICL 94

Query: 228 SITDFHPD 251
           SI+++HP+
Sbjct: 95  SISNYHPE 102



 Score = 41.1 bits (92), Expect = 5e-04
 Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +2

Query: 251 HWNPAWSISTILTGLLSFM-LEKTPTLGSIETSEYQKRCLAAESLE 385
           HW P+WS+ T L  L++FM       LGS++  + ++R LA +S E
Sbjct: 103 HWQPSWSVRTALVALIAFMPTSPNGALGSVDYPKDERRTLAIKSRE 148


>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
           E2; identical to gi:297877, SP:P35133
          Length = 148

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
 Frame = +3

Query: 12  LKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP 191
           L+ DP    +A PV  ++  W   + GP +SPY GG +   I FP ++PFKPP +   T 
Sbjct: 13  LQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTK 72

Query: 192 --NGRFKTNTRLCLSI 233
             +    +N  +CL I
Sbjct: 73  VFHPNINSNGSICLDI 88


>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
           E2; identical to gi:297877, SP:P35133
          Length = 148

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
 Frame = +3

Query: 12  LKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP 191
           L+ DP    +A PV  ++  W   + GP +SPY GG +   I FP ++PFKPP +   T 
Sbjct: 13  LQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTK 72

Query: 192 --NGRFKTNTRLCLSI 233
             +    +N  +CL I
Sbjct: 73  VFHPNINSNGSICLDI 88


>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
           identical to gi:297882, SP:P35131
          Length = 145

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
 Frame = +3

Query: 12  LKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP 191
           L+ DP    +A PV  ++  W   + GP +SPY GG +   I FP ++PFKPP +   T 
Sbjct: 13  LQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTK 72

Query: 192 --NGRFKTNTRLCLSI 233
             +    +N  +CL I
Sbjct: 73  VFHPNINSNGSICLDI 88


>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
           identical to gi:297882, SP:P35131
          Length = 148

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
 Frame = +3

Query: 12  LKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP 191
           L+ DP    +A PV  ++  W   + GP +SPY GG +   I FP ++PFKPP +   T 
Sbjct: 13  LQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTK 72

Query: 192 --NGRFKTNTRLCLSI 233
             +    +N  +CL I
Sbjct: 73  VFHPNINSNGSICLDI 88


>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
           identical to gi:297882, SP:P35131
          Length = 148

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
 Frame = +3

Query: 12  LKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP 191
           L+ DP    +A PV  ++  W   + GP +SPY GG +   I FP ++PFKPP +   T 
Sbjct: 13  LQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTK 72

Query: 192 --NGRFKTNTRLCLSI 233
             +    +N  +CL I
Sbjct: 73  VFHPNINSNGSICLDI 88


>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
           E2; identical to gi:12643427, SP:P35134
          Length = 148

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
 Frame = +3

Query: 12  LKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP 191
           L+ DP    +A PV  ++  W   + GP +SPY GG +   I FP ++PFKPP +   T 
Sbjct: 13  LQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTK 72

Query: 192 --NGRFKTNTRLCLSI 233
             +    +N  +CL I
Sbjct: 73  VYHPNINSNGSICLDI 88


>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
           (UBC9) E2; identical to gi:297883, SP:P35132; identical
           to cDNA UBC9 for ubiquitin conjugating enzyme homolog
           GI:297883
          Length = 178

 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
 Frame = +3

Query: 12  LKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP 191
           L+ DP    +A PV  ++  W   + GP  SPY GG +   I FP ++PFKPP +   T 
Sbjct: 43  LQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTK 102

Query: 192 --NGRFKTNTRLCLSI 233
             +    +N  +CL I
Sbjct: 103 VFHPNINSNGSICLDI 118


>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
           (UBC9) E2; identical to gi:297883, SP:P35132; identical
           to cDNA UBC9 for ubiquitin conjugating enzyme homolog
           GI:297883
          Length = 148

 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
 Frame = +3

Query: 12  LKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP 191
           L+ DP    +A PV  ++  W   + GP  SPY GG +   I FP ++PFKPP +   T 
Sbjct: 13  LQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTK 72

Query: 192 --NGRFKTNTRLCLSI 233
             +    +N  +CL I
Sbjct: 73  VFHPNINSNGSICLDI 88


>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
           identical to ubiquitin-conjugating enzyme COP10
           [Arabidopsis thaliana] GI:20065779; contains Pfam
           profile PF00179: Ubiquitin-conjugating enzyme
          Length = 182

 Score = 58.8 bits (136), Expect = 2e-09
 Identities = 25/59 (42%), Positives = 33/59 (55%)
 Frame = +3

Query: 12  LKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMIT 188
           L  DP P  +A P   N+  W   + GP  +PYEGG +   IIFP ++PFKPP +   T
Sbjct: 48  LNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKT 106


>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
           strong similarity to SP|P35133 Ubiquitin-conjugating
           enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
           ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
           thaliana}; contains Pfam profile PF00179:
           Ubiquitin-conjugating enzyme
          Length = 148

 Score = 58.8 bits (136), Expect = 2e-09
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
 Frame = +3

Query: 12  LKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP 191
           L+ DP    +A P   ++  W   + GP +SPY GG +   I FP ++PFKPP +   T 
Sbjct: 13  LQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTK 72

Query: 192 --NGRFKTNTRLCLSI 233
             +    +N  +CL I
Sbjct: 73  VFHPNINSNGNICLDI 88


>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
           identical or nearly so to Ubiquitin-conjugating enzymes
           SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
           thaliana}; contains Pfam profile PF00179:
           Ubiquitin-conjugating enzyme
          Length = 148

 Score = 58.8 bits (136), Expect = 2e-09
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
 Frame = +3

Query: 12  LKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP 191
           L+ DP    +A PV  ++  W   + GP  SPY GG +   I FP ++PFKPP +   T 
Sbjct: 13  LQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTK 72

Query: 192 --NGRFKTNTRLCLSI 233
             +    +N  +CL I
Sbjct: 73  VFHPNVNSNGSICLDI 88


>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
           identical to gi:297882, SP:P35131
          Length = 149

 Score = 58.4 bits (135), Expect = 3e-09
 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
 Frame = +3

Query: 15  KNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP- 191
           K+ P   + A PV  ++  W   + GP +SPY GG +   I FP ++PFKPP +   T  
Sbjct: 15  KDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKV 74

Query: 192 -NGRFKTNTRLCLSI 233
            +    +N  +CL I
Sbjct: 75  FHPNINSNGSICLDI 89


>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
           protein similar to  Ubiquitin-conjugating enzyme E2-16
           kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
           carrier protein) from {Schizosaccharomyces pombe}
           SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
           Pfam profile PF00179: Ubiquitin-conjugating enzyme
          Length = 154

 Score = 58.4 bits (135), Expect = 3e-09
 Identities = 22/45 (48%), Positives = 31/45 (68%)
 Frame = +3

Query: 57  SNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP 191
           +NI EW  V++GP+ +PYEGG ++  I FP ++PFKPP     TP
Sbjct: 34  NNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTP 78


>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
           strong similarity to ubiquitin-conjugating enzyme UBC2
           [Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
           sativum] GI:456568; contains Pfam profile PF00179:
           Ubiquitin-conjugating enzyme
          Length = 148

 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
 Frame = +3

Query: 12  LKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP 191
           L+ DP    +A P   ++ +W   + GP  SP+ GG +   I FP ++PFKPP +   T 
Sbjct: 13  LQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTK 72

Query: 192 --NGRFKTNTRLCLSI 233
             +    +N  +CL I
Sbjct: 73  VYHPNINSNGSICLDI 88


>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
           strong similarity to ubiquitin-conjugating enzyme UBC2
           [Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
           sativum] GI:456568; contains Pfam profile PF00179:
           Ubiquitin-conjugating enzyme
          Length = 148

 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
 Frame = +3

Query: 12  LKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP 191
           L+ DP    +A P   ++ +W   + GP  SP+ GG +   I FP ++PFKPP +   T 
Sbjct: 13  LQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTK 72

Query: 192 --NGRFKTNTRLCLSI 233
             +    +N  +CL I
Sbjct: 73  VYHPNINSNGSICLDI 88


>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
           similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
           kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
           carrier protein) {Pichia angusta}; contains Pfam profile
           PF00179: Ubiquitin-conjugating enzyme
          Length = 157

 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
 Frame = +3

Query: 57  SNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMIT----PNGRFKTNTRLC 224
           +NI +W  ++KGP ++PYEGG +      P  +P +PP +  +T    PN  FKT   +C
Sbjct: 32  TNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTG-EIC 90

Query: 225 LSI 233
           L I
Sbjct: 91  LDI 93


>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
           nearly identical to ubiquitin-conjugating enzyme E2
           [Catharanthus roseus] GI:5381319; contains Pfam profile
           PF00179: Ubiquitin-conjugating enzyme
          Length = 153

 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
 Frame = +3

Query: 9   RLKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMIT 188
           RL ++P P ++A P   N+  ++ ++ GP +SPYEGG +  ++  P E+P   P +  +T
Sbjct: 16  RLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT 75

Query: 189 P--NGRFKTNTRLCLSI 233
              +       R+CL I
Sbjct: 76  KIYHPNIDKLGRICLDI 92


>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
           nearly identical to ubiquitin-conjugating enzyme E2
           [Catharanthus roseus] GI:5381319; contains Pfam profile
           PF00179: Ubiquitin-conjugating enzyme
          Length = 112

 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
 Frame = +3

Query: 9   RLKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMIT 188
           RL ++P P ++A P   N+  ++ ++ GP +SPYEGG +  ++  P E+P   P +  +T
Sbjct: 16  RLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT 75

Query: 189 P--NGRFKTNTRLCLSI 233
              +       R+CL I
Sbjct: 76  KIYHPNIDKLGRICLDI 92


>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
           nearly identical to ubiquitin-conjugating enzyme E2
           [Catharanthus roseus] GI:5381319; contains Pfam profile
           PF00179: Ubiquitin-conjugating enzyme
          Length = 153

 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
 Frame = +3

Query: 9   RLKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMIT 188
           RL ++P P ++A P   N+  ++ ++ GP +SPYEGG +  ++  P E+P   P +  +T
Sbjct: 16  RLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT 75

Query: 189 P--NGRFKTNTRLCLSI 233
              +       R+CL I
Sbjct: 76  KIYHPNIDKLGRICLDI 92


>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
           identical to gi:2689242, SP:P42745
          Length = 152

 Score = 54.0 bits (124), Expect = 6e-08
 Identities = 19/62 (30%), Positives = 39/62 (62%)
 Frame = +3

Query: 3   YLRLKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYM 182
           + RL+ DP   ++  P  +NI+ W+ V+ GP+ +P++GG +   + F  ++P KPP++  
Sbjct: 13  FKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRF 72

Query: 183 IT 188
           ++
Sbjct: 73  VS 74


>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
           identical to gi:431259, SP:P25865
          Length = 152

 Score = 54.0 bits (124), Expect = 6e-08
 Identities = 19/62 (30%), Positives = 39/62 (62%)
 Frame = +3

Query: 3   YLRLKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYM 182
           + RL+ DP   ++  P  +NI+ W+ V+ GP+ +P++GG +   + F  ++P KPP++  
Sbjct: 13  FKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRF 72

Query: 183 IT 188
           ++
Sbjct: 73  VS 74


>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
           identical to gi:431259, SP:P25865
          Length = 152

 Score = 54.0 bits (124), Expect = 6e-08
 Identities = 19/62 (30%), Positives = 39/62 (62%)
 Frame = +3

Query: 3   YLRLKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYM 182
           + RL+ DP   ++  P  +NI+ W+ V+ GP+ +P++GG +   + F  ++P KPP++  
Sbjct: 13  FKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRF 72

Query: 183 IT 188
           ++
Sbjct: 73  VS 74


>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
           identical to gi:431261, SP:P42746
          Length = 150

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 19/62 (30%), Positives = 38/62 (61%)
 Frame = +3

Query: 3   YLRLKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYM 182
           + RL+ DP   ++  P  +NI+ W+ ++ GPE +P++GG +   + F  ++P KPP +  
Sbjct: 13  FKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRF 72

Query: 183 IT 188
           ++
Sbjct: 73  VS 74


>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
           strong similar to ubiquitin-conjugating enzymes E2-17
           from [Arabidopsis thaliana] SP|P35134, SP|P35132,
           SP|P35133; contains Pfam profile PF00179:
           Ubiquitin-conjugating enzyme
          Length = 149

 Score = 47.6 bits (108), Expect = 5e-06
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
 Frame = +3

Query: 12  LKNDPVPYVTAEPVPS-NILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMIT 188
           ++  P    +A PV   +I  W   + GP  SPY GG +   I F  ++PFKPP +   T
Sbjct: 13  MQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKT 72

Query: 189 P--NGRFKTNTRLCLSI 233
              +    +   +CL I
Sbjct: 73  KVYHPNIDSKGSICLDI 89


>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
           identical to gi:992703, SP:P42747
          Length = 198

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
 Frame = +3

Query: 60  NILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP--NGRFKTNTRLCLSI 233
           NI EW   + GP  + YEGG+++  + FP+ +P  PP++   +   +    ++ R+C+SI
Sbjct: 65  NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISI 124

Query: 234 TDFHP 248
              HP
Sbjct: 125 --LHP 127


>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
           similar to Ubiquitin-conjugating enzyme E2
           (Ubiquitin-protein ligase) (Ubiquitin carrier protein)
           from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
           pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
           contains Pfam profile PF00179: Ubiquitin-conjugating
           enzyme
          Length = 409

 Score = 46.4 bits (105), Expect = 1e-05
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +3

Query: 84  VKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP--NGRFKTNTRLCLSITDFHPDTG 257
           ++GPE + Y  G ++ KI  P  +PF+PP +   TP  +     + R+CL I +  P   
Sbjct: 51  IEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPK-- 108

Query: 258 TLLGLFLRSLQVC*VLCWRRLL 323
              G +  SL +  VL   RLL
Sbjct: 109 ---GAWQPSLNISTVLTSMRLL 127



 Score = 27.1 bits (57), Expect = 8.3
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 248 GHWNPAWSISTILTGLLSFMLEKTPTLG 331
           G W P+ +IST+LT +   + E  P  G
Sbjct: 109 GAWQPSLNISTVLTSMRLLLSEPNPDDG 136


>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
           E2; identical to gi:992706
          Length = 166

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
 Frame = +3

Query: 60  NILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP--NGRFKTNTRLCLSI 233
           NI EW   + GP  + YEGG+++  + FP+ +P  PP++   +   +     + R+C+SI
Sbjct: 33  NIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISI 92

Query: 234 TDFHP 248
              HP
Sbjct: 93  --LHP 95


>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
           similar to ubiquitin conjugating enzyme from [Oryza
           sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
           SP|P35131; contains Pfam profile PF00179:
           Ubiquitin-conjugating enzyme
          Length = 177

 Score = 45.6 bits (103), Expect = 2e-05
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +3

Query: 48  PVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSI 176
           P P NI  W   V GP   PYE G +   +  P ++P++PP I
Sbjct: 54  PSPENIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKI 96


>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
           E2; UbcAT3; identical to gi:2129757, S46656
          Length = 167

 Score = 44.0 bits (99), Expect = 7e-05
 Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
 Frame = +3

Query: 60  NILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP--NGRFKTNTRLCLSI 233
           N+ +W   + GP  + YEGG+++  + FP  +P  PP++   +   +    ++ ++C+SI
Sbjct: 34  NVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISI 93

Query: 234 TDFHP 248
              HP
Sbjct: 94  --LHP 96


>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
           nearly identical to ubiquitin-conjugating enzyme UBC20
           [Arabidopsis thaliana] GI:22530867; contains Pfam
           profile PF00179: Ubiquitin-conjugating enzyme
          Length = 180

 Score = 41.5 bits (93), Expect = 4e-04
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +3

Query: 30  PYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSI 176
           P ++A P   NI  W   + G + + +EG  Y   + F  ++PFKPP +
Sbjct: 53  PGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKV 101


>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
           strong similarity to SP|P50550 Ubiquitin-like protein
           SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
           ligase) (Ubiquitin carrier protein)
           (Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
           contains Pfam profile PF00179: Ubiquitin-conjugating
           enzyme
          Length = 160

 Score = 41.1 bits (92), Expect = 5e-04
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
 Frame = +3

Query: 15  KNDPVPYV----TAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYM 182
           KN P  +V    T +    N++ WH  + G   + +EGG++   + F  ++P KPP    
Sbjct: 19  KNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKF 78

Query: 183 ITPNGRFKTNT----RLCLSI 233
             P G F  N      +CLSI
Sbjct: 79  --PQGFFHPNVYPSGTVCLSI 97


>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
           nearly identical to ubiquitin-conjugating enzyme E2
           [Catharanthus roseus] GI:5381319; contains Pfam profile
           PF00179: Ubiquitin-conjugating enzyme
          Length = 120

 Score = 40.7 bits (91), Expect = 6e-04
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +3

Query: 72  WHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP--NGRFKTNTRLCLSI 233
           ++ ++ GP +SPYEGG +  ++  P E+P   P +  +T   +       R+CL I
Sbjct: 4   FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 59


>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
           similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
           kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
           carrier protein) {Homo sapiens}; contains Pfam profile
           PF00179: Ubiquitin-conjugating enzyme
          Length = 251

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
 Frame = +3

Query: 84  VKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP--NGRFKTNTRLCLSI--TDFHPD 251
           ++GP  +PYE G +  K+    +FP  PP  Y +T   +    +N  +C++    D++P 
Sbjct: 46  IEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTLKKDWNPS 105

Query: 252 TG 257
            G
Sbjct: 106 LG 107


>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
           nearly identical to ubiquitin-conjugating enzyme UBC19
           [Arabidopsis thaliana] GI:22530865; contains Pfam
           profile PF00179: Ubiquitin-conjugating enzyme
          Length = 181

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +3

Query: 30  PYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSI 176
           P ++A P   NI  W   + G + + +EG  Y   + F  ++PFK P +
Sbjct: 54  PGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKV 102


>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
           strong similarity to ubiquitin conjugating enzyme
           [Lycopersicon esculentum] GI:886679; contains Pfam
           profile PF00179: Ubiquitin-conjugating enzyme
          Length = 192

 Score = 38.3 bits (85), Expect = 0.003
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +3

Query: 48  PVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMIT 188
           P   N+      + GP  +PYEGG +   I  P  +PF+PP +   T
Sbjct: 27  PKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFST 73


>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
           identical to gi:431265, SP:P42748
          Length = 187

 Score = 38.3 bits (85), Expect = 0.003
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +3

Query: 45  EPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMIT 188
           E +   + E++    GP+ S Y+GG +  ++  P  +P+K PS+  IT
Sbjct: 23  ETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYPYKSPSVGFIT 70


>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
           identical to gi:431269, SP:P42749
          Length = 185

 Score = 37.9 bits (84), Expect = 0.004
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +3

Query: 45  EPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMIT 188
           E +   + E+     GP+ S YEGG +  ++  P  +P+K PS+  IT
Sbjct: 23  EMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYPYKSPSVGFIT 70


>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
           identical to gi|431267, SP:P42750, PIR:S52661; contains
           a ubiquitin-conjugating enzymes active site (PDOC00163)
          Length = 183

 Score = 35.1 bits (77), Expect = 0.031
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +3

Query: 66  LEWHYVV-KGPEKSPYEGGYYHXKIIFPREFPFKPPSI 176
           L+  YV   GP  S Y+GG +  K+  P  +P+K PS+
Sbjct: 29  LQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSV 66


>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
           protein similar to ubiquitin-conjugating enzyme
           GB:3319990 from [Mus musculus]; contains Pfam profile
           PF00179: Ubiquitin-conjugating enzyme
          Length = 1163

 Score = 35.1 bits (77), Expect = 0.031
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
 Frame = +3

Query: 12  LKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP 191
           L+ND    ++     S +     V+ G E +PY  G +   I FP  +P  PP+++  + 
Sbjct: 283 LENDLPEAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSG 342

Query: 192 NGRFKTNT----RLCLSI 233
             R   N     ++CLS+
Sbjct: 343 GLRINPNLYNCGKVCLSL 360



 Score = 35.1 bits (77), Expect = 0.031
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +3

Query: 81   VVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITPNGRFKTNTRLC 224
            V+ G E +PY  G +   I FP  +P  PP++Y  +   R   N   C
Sbjct: 952  VIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHSGGLRINPNLYNC 999



 Score = 33.1 bits (72), Expect = 0.13
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +3

Query: 81  VVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITPNGRFKTNTRLC 224
           V+ G E +PY  G +   I FP  +P  PP ++  +   R   N   C
Sbjct: 640 VIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRINPNLYKC 687


>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
           protein low similarity to ubiquitin-conjugating
           BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
           ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
           contains Pfam profile PF00179: Ubiquitin-conjugating
           enzyme
          Length = 907

 Score = 34.7 bits (76), Expect = 0.041
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +3

Query: 90  GPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITPNGRFKTNT----RLCLSITDFHPDTG 257
           G   +PY  G +   I+ P ++P +PP ++  +   R   N     R+CLS+ +    +G
Sbjct: 700 GAPGTPYHDGLFFFDIMLPPQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLLNTWSGSG 759

Query: 258 T 260
           T
Sbjct: 760 T 760


>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
           protein similar to DNA-binding protein CROC-1B [Homo
           sapiens] GI:1066082; contains Pfam profile PF00179:
           Ubiquitin-conjugating enzyme
          Length = 146

 Score = 33.1 bits (72), Expect = 0.13
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +3

Query: 72  WHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSI 176
           W   + GP  + +EG  Y  K+   +++P KPP++
Sbjct: 49  WTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTV 83


>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
           protein similar to DNA-binding protein CROC-1B [Homo
           sapiens] GI:1066082; contains Pfam profile PF00179:
           Ubiquitin-conjugating enzyme
          Length = 145

 Score = 33.1 bits (72), Expect = 0.13
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +3

Query: 72  WHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSI 176
           W   + GP  + +EG  Y  K+   +++P KPP++
Sbjct: 48  WTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTV 82


>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
           similar to ubiquitin-conjugating enzyme (GI:3319990)
           [Mus musculus]; similar to Baculoviral IAP
           repeat-containing protein 6 (Ubiquitin-conjugating
           BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
           sapiens];
          Length = 609

 Score = 32.7 bits (71), Expect = 0.17
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
 Frame = +3

Query: 81  VVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITPNGRFKTNT----RLCLSI 233
           V+ G + +PY  G +   I FP  +P  PP ++  +   R   N     ++CLS+
Sbjct: 367 VIIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYNCGKVCLSL 421


>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
           protein similar to TRAF6-regulated IKK activator 1 beta
           Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
           PF00179: Ubiquitin-conjugating enzyme
          Length = 158

 Score = 32.7 bits (71), Expect = 0.17
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +3

Query: 72  WHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSI 176
           W   + GP  + YEG  +  K+   +E+P  PP++
Sbjct: 47  WTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTV 81


>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
           protein similar to TRAF6-regulated IKK activator 1 beta
           Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
           PF00179: Ubiquitin-conjugating enzyme
          Length = 159

 Score = 31.9 bits (69), Expect = 0.29
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +3

Query: 72  WHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSI 176
           W   + GP  + YEG  +  K+   +++P  PP++
Sbjct: 47  WTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTV 81


>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
            low similarity to ubiquitin-conjugating BIR-domain enzyme
            APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
            enzyme [Mus musculus] GI:3319990; contains Pfam profile
            PF00179: Ubiquitin-conjugating enzyme
          Length = 1102

 Score = 31.5 bits (68), Expect = 0.38
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
 Frame = +3

Query: 81   VVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITPNGRFKTNT----RLCLSI 233
            V+ G   +PY+ G +      P ++P  PPS Y  +   R   N     ++CLS+
Sbjct: 885  VIVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSL 939


>At5g03470.1 68418.m00303 serine/threonine protein phosphatase 2A
           (PP2A) regulatory subunit B' (B'alpha) similar to
           SWISS-PROT:Q28653 serine/threonine protein phosphatase
           2A, 56 kDa regulatory subunit, delta isoform (PP2A, B
           subunit, B' delta isoform, PP2A, B subunit, B56 delta
           isoform, PP2A, B subunit, PR61 delta isoform, PP2A, B
           subunit, R5 delta isoform, PP2A, B subunit, B'-gamma)
           [Oryctolagus cuniculus]; contains Pfam domain, PF01603:
           Protein phosphatase 2A regulatory B subunit (B56 family)
          Length = 495

 Score = 31.1 bits (67), Expect = 0.51
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 368 AAESLEINIKNKMFCELFPEYVEEIEQQLKQRQ 466
           A   L  NIK +MF E+ PE  EE +QQ +++Q
Sbjct: 431 AVHGLSANIK-RMFMEMDPELFEECQQQYEEKQ 462


>At2g39740.1 68415.m04880 expressed protein
          Length = 474

 Score = 30.3 bits (65), Expect = 0.89
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 31  HMLRPNLCRPTYWNGITSLKGRRKVPTKG 117
           HM   N  RP Y NG+ S +   K+P++G
Sbjct: 436 HMNGVNSARPAYTNGVNSARPPSKIPSQG 464


>At5g59460.1 68418.m07452 scarecrow-like transcription factor 11
           (SCL11) identical to cDNA scarecrow-like 11 (SCL11)
           mRNA, partial cds gi:4580526
          Length = 172

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +3

Query: 189 PNGRF---KTNTRLCLSITDFHPDTGTLLG 269
           PNG F   +T  + C+ ITD+ P  G LLG
Sbjct: 33  PNGSFPSLRTVAKKCVVITDWDPQPGALLG 62


>At4g22400.1 68417.m03237 expressed protein
          Length = 327

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
 Frame = +2

Query: 203 QDKHTIVPQYYRLSSGHWNPAWSISTIL-TGLL-SFMLEK-TPTLGSIETSEYQKRC-LA 370
           +D +T++  Y   +SG W   WS++++L  G+  ++ +E  +P+   I    + KR    
Sbjct: 182 RDTYTLLIYYVAKTSGRWEQNWSVASMLVVGIFDTWYIESISPSPDKISIEIWPKRYDFT 241

Query: 371 AESLEINIKN 400
            ++ E N+ N
Sbjct: 242 FQTQEWNVSN 251


>At3g60630.1 68416.m06784 scarecrow transcription factor family
           protein scarecrow-like 6, Arabidopsis thaliana,
           EMBL:AF036303
          Length = 623

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
 Frame = -1

Query: 233 NTEAQSCV---CLEPAIRCYHVNR-RWFERKFPWEN 138
           N EA + +   C++P+I+    NR RW ER  PW +
Sbjct: 527 NAEAATSIERFCVQPSIQKLLTNRYRWMERSPPWRS 562


>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
           protein similar to DNA-binding protein CROC-1B [Homo
           sapiens] GI:1066082; contains Pfam profile PF00179:
           Ubiquitin-conjugating enzyme
          Length = 147

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 72  WHYVVKGPEK-SPYEGGYYHXKIIFPREFPFKPPSI 176
           W   + GP   + +EG  Y  K+   +++P KPP++
Sbjct: 49  WTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTV 84


>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
           protein similar to DNA-binding protein CROC-1B [Homo
           sapiens] GI:1066082; contains Pfam profile PF00179:
           Ubiquitin-conjugating enzyme
          Length = 146

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 72  WHYVVKGPEK-SPYEGGYYHXKIIFPREFPFKPPSI 176
           W   + GP   + +EG  Y  K+   +++P KPP++
Sbjct: 48  WTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTV 83


>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
           E2; identical to gi:2801444, GB:AAC39325 from
           [Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
           (1993))
          Length = 161

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 254 WNPAWSISTILTGLLSFMLEKTPTLGSIETSEYQKRC 364
           W+PA ++S+I   +LS +   T      +   Y K C
Sbjct: 107 WSPAMTVSSICISILSMLSSSTEKQRPTDNDRYVKNC 143


>At4g19190.1 68417.m02832 zinc knuckle (CCHC-type) family protein
           contains Pfam domain, PF00098: Zinc knuckle
          Length = 595

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 6   LRLK-NDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGY 122
           LRLK +DP+  + A   PS  L+W    K P  SP  GG+
Sbjct: 240 LRLKRDDPLTAIIAHTDPSEPLKWELKQK-PGLSPPRGGF 278


>At3g44610.1 68416.m04796 protein kinase family protein similar to
           viroid symptom modulation protein (protein
           kinase)[Lycopersicon esculentum] gi|7672777|gb|AAF66637;
           contains protein kinase domain, Pfam:PF00069
          Length = 451

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
 Frame = -1

Query: 230 TEAQSCV---CLEPAIRCYHVNRRWFERKFPWENNLSMIISPFVGTFLRPFNDVMPFQYV 60
           T + SC+   C+ PA+ C+H   R  ++K    NN   +++  V        DV    +V
Sbjct: 263 TTSSSCMIPNCIVPAVSCFHPRIRRRKKKTDHRNNGPELVAEPV--------DVRSMSFV 314

Query: 59  GRHRF 45
           G H +
Sbjct: 315 GTHEY 319


>At5g54880.1 68418.m06836 DTW domain-containing protein contains
           Pfam domain, PF03942: DTW domain
          Length = 394

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
 Frame = +2

Query: 146 KGISVQTTFDLHDNTEWQVQDKHTIVPQYYRLSSGHWNPAWSISTILTGLLSFMLEKTPT 325
           K + V T FD+HD  E+ ++    I     ++ + H +  + +  + +  L     K  +
Sbjct: 98  KNVGVTTVFDVHDEAEFLIR---VIGSGCSKIDTNHLDSEYRVENVASLELDDSF-KLGS 153

Query: 326 LGSIETSEYQKRCLAAE--SLEI 388
            G++E  E +K  +  +  SLEI
Sbjct: 154 SGNVENLESEKNVVLVDHGSLEI 176


>At1g23670.2 68414.m02987 expressed protein contains Pfam profile
           PF02713: Domain of unknown function DUF220
          Length = 264

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 389 NIKNKMFCELFPEYVEEIEQQLK 457
           N+K K   E +PE  EE+++QLK
Sbjct: 25  NVKTKSVSETYPENREELKKQLK 47


>At1g23670.1 68414.m02986 expressed protein contains Pfam profile
           PF02713: Domain of unknown function DUF220
          Length = 219

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 389 NIKNKMFCELFPEYVEEIEQQLK 457
           N+K K   E +PE  EE+++QLK
Sbjct: 25  NVKTKSVSETYPENREELKKQLK 47


>At5g63810.1 68418.m08008 beta-galactosidase, putative / lactase,
           putative similar to beta-galactosidase GI:7939621 from
           [Lycopersicon esculentum]; contains Pfam profile
           PF01301: Glycosyl hydrolases family 35
          Length = 741

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 209 CLEPAIRCYHVNRRWFE 159
           C EP+ R YHV R WF+
Sbjct: 696 CGEPSQRWYHVPRSWFK 712


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,814,885
Number of Sequences: 28952
Number of extensions: 286513
Number of successful extensions: 936
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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