Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0034.Seq
(678 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70... 145 2e-35
At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1 (HS... 142 2e-34
At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein, puta... 136 1e-32
At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2 (HS... 134 4e-32
At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3 (HS... 134 5e-32
At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70... 134 7e-32
At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)... 114 4e-26
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 113 1e-25
At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)... 112 2e-25
At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)... 112 2e-25
At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)... 87 1e-17
At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial, p... 85 4e-17
At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70... 84 7e-17
At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)... 81 5e-16
At4g16660.1 68417.m02517 heat shock protein 70, putative / HSP70... 69 3e-12
At1g11660.1 68414.m01339 heat shock protein, putative strong sim... 65 5e-11
At2g32120.2 68415.m03926 heat shock protein 70 family protein / ... 64 8e-11
At2g32120.1 68415.m03925 heat shock protein 70 family protein / ... 64 8e-11
At1g79930.1 68414.m09340 heat shock protein, putative contains P... 52 3e-07
At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70... 52 3e-07
At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70... 52 3e-07
At1g15740.1 68414.m01888 leucine-rich repeat family protein 29 2.8
At2g01730.1 68415.m00101 metallo-beta-lactamase family protein s... 29 3.7
At1g69570.1 68414.m08001 Dof-type zinc finger domain-containing ... 29 3.7
At1g48500.1 68414.m05421 expressed protein ; expression supporte... 29 3.7
At1g03080.1 68414.m00282 kinase interacting family protein simil... 29 3.7
At3g54280.1 68416.m05999 SNF2 domain-containing protein / helica... 28 6.5
At3g55150.1 68416.m06125 exocyst subunit EXO70 family protein co... 27 8.6
At2g42820.1 68415.m05301 abscisic acid-responsive HVA22 family p... 27 8.6
>At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein
GI:425194 [Spinacia oleracea]
Length = 650
Score = 145 bits (352), Expect = 2e-35
Identities = 69/84 (82%), Positives = 76/84 (90%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 181
RAKRTLSS+ Q +I IDSLFEGIDFYT+ITRARFEELN DLFR MEPVEK LRDAKMDK
Sbjct: 275 RAKRTLSSTAQTTIEIDSLFEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDK 334
Query: 182 AQIHDIVLVGGSTRIPKVQKLLQD 253
+ +HD+VLVGGSTRIPKVQ+LLQD
Sbjct: 335 SSVHDVVLVGGSTRIPKVQQLLQD 358
Score = 102 bits (244), Expect = 3e-22
Identities = 48/56 (85%), Positives = 52/56 (92%)
Frame = +3
Query: 510 LIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS 677
LIQV+EGERA TKDNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA +K+
Sbjct: 445 LIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKT 500
Score = 76.2 bits (179), Expect = 2e-14
Identities = 41/85 (48%), Positives = 45/85 (52%)
Frame = +1
Query: 253 FFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 432
FFNGKEL KSINPDE IL G+ +E+VQD G+ETAGGVMT
Sbjct: 359 FFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTV 418
Query: 433 LIKRNXXXXXXXXXXXXXYSDNQPG 507
LI RN YSDNQPG
Sbjct: 419 LIPRNTTIPTKKEQIFSTYSDNQPG 443
>At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1
(HSC70-1) (HSP70-1) identical to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}
Length = 651
Score = 142 bits (344), Expect = 2e-34
Identities = 67/84 (79%), Positives = 76/84 (90%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 181
RAKRTLSS+ Q +I IDSL+EGIDFY++ITRARFEELN DLFR MEPVEK LRDAKMDK
Sbjct: 275 RAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDK 334
Query: 182 AQIHDIVLVGGSTRIPKVQKLLQD 253
+ +HD+VLVGGSTRIPKVQ+LLQD
Sbjct: 335 STVHDVVLVGGSTRIPKVQQLLQD 358
Score = 102 bits (244), Expect = 3e-22
Identities = 48/56 (85%), Positives = 52/56 (92%)
Frame = +3
Query: 510 LIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS 677
LIQV+EGERA TKDNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA +K+
Sbjct: 445 LIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKT 500
Score = 78.2 bits (184), Expect = 5e-15
Identities = 42/85 (49%), Positives = 46/85 (54%)
Frame = +1
Query: 253 FFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 432
FFNGKEL KSINPDE IL G+ +E+VQD G+ETAGGVMTT
Sbjct: 359 FFNGKELCKSINPDEAVAYGAAVQGAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTT 418
Query: 433 LIKRNXXXXXXXXXXXXXYSDNQPG 507
LI RN YSDNQPG
Sbjct: 419 LIPRNTTIPTKKEQVFSTYSDNQPG 443
>At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein,
putative / HSC70, putative / HSP70, putative strong
similarity to heat shock cognate 70 kd protein 1
SP:P22953 [Arabidopsis thaliana (Mouse-ear cress)]
Length = 617
Score = 136 bits (329), Expect = 1e-32
Identities = 62/84 (73%), Positives = 74/84 (88%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 181
RAKRTLSS+ Q ++ +DSLFEGIDFY+ ITRA+FEE+N DLFR MEPV K LRD+KMDK
Sbjct: 275 RAKRTLSSTAQTTVEVDSLFEGIDFYSPITRAKFEEMNMDLFRKCMEPVMKCLRDSKMDK 334
Query: 182 AQIHDIVLVGGSTRIPKVQKLLQD 253
+ +HD+VLVGGSTRIPKVQ+LLQD
Sbjct: 335 SMVHDVVLVGGSTRIPKVQQLLQD 358
Score = 90.6 bits (215), Expect = 8e-19
Identities = 41/56 (73%), Positives = 49/56 (87%)
Frame = +3
Query: 510 LIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS 677
LIQV+EGERA T DNN+LG+F L+GIPPAPRG+PQ V FDID+NGILNVSA +K+
Sbjct: 445 LIQVYEGERARTIDNNILGQFVLSGIPPAPRGIPQFTVCFDIDSNGILNVSAEDKA 500
Score = 69.3 bits (162), Expect = 2e-12
Identities = 39/84 (46%), Positives = 43/84 (51%)
Frame = +1
Query: 253 FFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 432
FFNGKEL KSINPDE IL G+ +E+VQD GIET GGVMTT
Sbjct: 359 FFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGIETIGGVMTT 418
Query: 433 LIKRNXXXXXXXXXXXXXYSDNQP 504
LI+RN DNQP
Sbjct: 419 LIQRNTTIPAKKEQEFTTTVDNQP 442
>At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2
(HSC70-2) (HSP70-2) identical to SP|P22954 Heat shock
cognate 70 kDa protein 2 (Hsc70.2) {Arabidopsis
thaliana}
Length = 653
Score = 134 bits (325), Expect = 4e-32
Identities = 64/84 (76%), Positives = 73/84 (86%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 181
RAKRTLSS+ Q +I IDSL+ G DFY+ ITRARFEE+N DLFR MEPVEK LRDAKMDK
Sbjct: 275 RAKRTLSSTAQTTIEIDSLYGGADFYSPITRARFEEMNMDLFRKCMEPVEKCLRDAKMDK 334
Query: 182 AQIHDIVLVGGSTRIPKVQKLLQD 253
+ +H+IVLVGGSTRIPKVQ+LLQD
Sbjct: 335 STVHEIVLVGGSTRIPKVQQLLQD 358
Score = 103 bits (247), Expect = 1e-22
Identities = 49/56 (87%), Positives = 52/56 (92%)
Frame = +3
Query: 510 LIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS 677
LIQVFEGERA TKDNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA +K+
Sbjct: 445 LIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKT 500
Score = 79.0 bits (186), Expect = 3e-15
Identities = 42/85 (49%), Positives = 47/85 (55%)
Frame = +1
Query: 253 FFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 432
FFNGKEL KSINPDE IL G+ +E+VQD G+ETAGGVMTT
Sbjct: 359 FFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTT 418
Query: 433 LIKRNXXXXXXXXXXXXXYSDNQPG 507
LI+RN YSDNQPG
Sbjct: 419 LIQRNTTIPTKKEQVFSTYSDNQPG 443
>At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3
(HSC70-3) (HSP70-3) identical to SP|O65719 Heat shock
cognate 70 kDa protein 3 (Hsc70.3) {Arabidopsis
thaliana}
Length = 649
Score = 134 bits (324), Expect = 5e-32
Identities = 66/84 (78%), Positives = 71/84 (84%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 181
RAKRTLSS+ Q +I IDSLF+GIDFY ITRARFEELN DLFR MEPVEK LRDAKMDK
Sbjct: 275 RAKRTLSSTAQTTIEIDSLFDGIDFYAPITRARFEELNIDLFRKCMEPVEKCLRDAKMDK 334
Query: 182 AQIHDIVLVGGSTRIPKVQKLLQD 253
I D+VLVGGSTRIPKVQ+LL D
Sbjct: 335 NSIDDVVLVGGSTRIPKVQQLLVD 358
Score = 102 bits (244), Expect = 3e-22
Identities = 48/56 (85%), Positives = 52/56 (92%)
Frame = +3
Query: 510 LIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS 677
LIQV+EGERA TKDNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA +K+
Sbjct: 445 LIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKT 500
Score = 77.0 bits (181), Expect = 1e-14
Identities = 41/85 (48%), Positives = 46/85 (54%)
Frame = +1
Query: 253 FFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 432
FFNGKEL KSINPDE IL G+ +E+VQD G+ETAGGVMT
Sbjct: 359 FFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTV 418
Query: 433 LIKRNXXXXXXXXXXXXXYSDNQPG 507
LI+RN YSDNQPG
Sbjct: 419 LIQRNTTIPTKKEQVFSTYSDNQPG 443
>At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70,
putative similar to heat shock protein hsp70 GI:1771478
from [Pisum sativum]
Length = 646
Score = 134 bits (323), Expect = 7e-32
Identities = 61/84 (72%), Positives = 74/84 (88%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 181
RAKRTLSS+ Q +I IDSL EGIDFY +I+RARFEE+N DLFR M+PVEK L+DAK+DK
Sbjct: 274 RAKRTLSSTAQTTIEIDSLHEGIDFYATISRARFEEMNMDLFRKCMDPVEKVLKDAKLDK 333
Query: 182 AQIHDIVLVGGSTRIPKVQKLLQD 253
+ +HD+VLVGGSTRIPK+Q+LLQD
Sbjct: 334 SSVHDVVLVGGSTRIPKIQQLLQD 357
Score = 98.3 bits (234), Expect = 4e-21
Identities = 46/56 (82%), Positives = 50/56 (89%)
Frame = +3
Query: 510 LIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS 677
LIQV+EGERA T+DNNLLG FEL GIPPAPRGVPQI V FDIDANGILNVSA +K+
Sbjct: 444 LIQVYEGERARTRDNNLLGTFELKGIPPAPRGVPQINVCFDIDANGILNVSAEDKT 499
Score = 75.8 bits (178), Expect = 2e-14
Identities = 41/85 (48%), Positives = 45/85 (52%)
Frame = +1
Query: 253 FFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 432
FFNGKEL KSINPDE IL G+ SE+VQD G+ETAGGVMT
Sbjct: 358 FFNGKELCKSINPDEAVAYGAAVQAAILTGEGSEKVQDLLLLDVAPLSLGLETAGGVMTV 417
Query: 433 LIKRNXXXXXXXXXXXXXYSDNQPG 507
LI RN Y+DNQPG
Sbjct: 418 LIPRNTTVPCKKEQVFSTYADNQPG 442
>At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)
SWISS-PROT:Q9LKR3 PMID:8888624
Length = 669
Score = 114 bits (275), Expect = 4e-26
Identities = 55/84 (65%), Positives = 68/84 (80%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 181
RAKR LSS Q + I+SLF+G+DF +TRARFEELN DLFR TM PV+K++ DA + K
Sbjct: 300 RAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQK 359
Query: 182 AQIHDIVLVGGSTRIPKVQKLLQD 253
+QI +IVLVGGSTRIPKVQ+LL+D
Sbjct: 360 SQIDEIVLVGGSTRIPKVQQLLKD 383
Score = 93.9 bits (223), Expect = 9e-20
Identities = 42/55 (76%), Positives = 49/55 (89%)
Frame = +3
Query: 513 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS 677
IQVFEGER++TKD LLGKF+L GIPPAPRG PQIEVTF++DANGILNV A +K+
Sbjct: 471 IQVFEGERSLTKDCRLLGKFDLNGIPPAPRGTPQIEVTFEVDANGILNVKAEDKA 525
Score = 58.8 bits (136), Expect = 3e-09
Identities = 32/83 (38%), Positives = 36/83 (43%)
Frame = +1
Query: 253 FFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 432
FF GKE NK +NPDE IL G+ +E +D GIET GGVMT
Sbjct: 384 FFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTK 443
Query: 433 LIKRNXXXXXXXXXXXXXYSDNQ 501
LI RN Y D Q
Sbjct: 444 LIPRNTVIPTKKSQVFTTYQDQQ 466
>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
Similar to Arabidopsis luminal binding protein
(gb|D89342); contains Pfam domain PF00012: dnaK protein
Length = 678
Score = 113 bits (271), Expect = 1e-25
Identities = 52/83 (62%), Positives = 69/83 (83%)
Frame = +2
Query: 5 AKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 184
AKR+LS+ Q + I+SLF+G+DF +TRARFEELN DLF+ TMEPV+K+L+DA + K+
Sbjct: 315 AKRSLSNQHQVRVEIESLFDGVDFSEPLTRARFEELNMDLFKKTMEPVKKALKDAGLKKS 374
Query: 185 QIHDIVLVGGSTRIPKVQKLLQD 253
I +IVLVGGSTRIPKVQ++L+D
Sbjct: 375 DIDEIVLVGGSTRIPKVQQMLKD 397
Score = 89.4 bits (212), Expect = 2e-18
Identities = 41/54 (75%), Positives = 47/54 (87%)
Frame = +3
Query: 513 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEK 674
I V+EGER+MTKDN LGKF+LTGI PAPRGVPQIEVTF++DANGIL V A +K
Sbjct: 485 INVYEGERSMTKDNRELGKFDLTGILPAPRGVPQIEVTFEVDANGILQVKAEDK 538
Score = 55.6 bits (128), Expect = 3e-08
Identities = 30/83 (36%), Positives = 36/83 (43%)
Frame = +1
Query: 253 FFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 432
FF+GKE +K NPDE +L G+ EE Q+ GIET GGVMT
Sbjct: 398 FFDGKEPSKGTNPDEAVAYGAAVQGGVLSGEGGEETQNILLLDVAPLSLGIETVGGVMTN 457
Query: 433 LIKRNXXXXXXXXXXXXXYSDNQ 501
+I RN Y D Q
Sbjct: 458 IIPRNTVIPTKKSQVFTTYQDQQ 480
>At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 613
Score = 112 bits (269), Expect = 2e-25
Identities = 54/84 (64%), Positives = 67/84 (79%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 181
RAKR LSS Q + I+SLF+G+D +TRARFEELN DLFR TM PV+K++ DA + K
Sbjct: 300 RAKRALSSQHQVRVEIESLFDGVDLSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQK 359
Query: 182 AQIHDIVLVGGSTRIPKVQKLLQD 253
+QI +IVLVGGSTRIPKVQ+LL+D
Sbjct: 360 SQIDEIVLVGGSTRIPKVQQLLKD 383
Score = 77.0 bits (181), Expect = 1e-14
Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Frame = +3
Query: 513 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFD-IDANGIL 653
IQVFEGER++TKD LLGKF+LTG+PPAPRG PQIEVTF+ IDA L
Sbjct: 471 IQVFEGERSLTKDCRLLGKFDLTGVPPAPRGTPQIEVTFEKIDARNAL 518
Score = 58.8 bits (136), Expect = 3e-09
Identities = 32/83 (38%), Positives = 36/83 (43%)
Frame = +1
Query: 253 FFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 432
FF GKE NK +NPDE IL G+ +E +D GIET GGVMT
Sbjct: 384 FFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTK 443
Query: 433 LIKRNXXXXXXXXXXXXXYSDNQ 501
LI RN Y D Q
Sbjct: 444 LIPRNTVIPTKKSQVFTTYQDQQ 466
>At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 668
Score = 112 bits (269), Expect = 2e-25
Identities = 54/84 (64%), Positives = 67/84 (79%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 181
RAKR LSS Q + I+SLF+G+D +TRARFEELN DLFR TM PV+K++ DA + K
Sbjct: 300 RAKRALSSQHQVRVEIESLFDGVDLSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQK 359
Query: 182 AQIHDIVLVGGSTRIPKVQKLLQD 253
+QI +IVLVGGSTRIPKVQ+LL+D
Sbjct: 360 SQIDEIVLVGGSTRIPKVQQLLKD 383
Score = 95.5 bits (227), Expect = 3e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +3
Query: 513 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS 677
IQVFEGER++TKD LLGKF+LTG+PPAPRG PQIEVTF++DANGILNV A +K+
Sbjct: 471 IQVFEGERSLTKDCRLLGKFDLTGVPPAPRGTPQIEVTFEVDANGILNVKAEDKA 525
Score = 58.8 bits (136), Expect = 3e-09
Identities = 32/83 (38%), Positives = 36/83 (43%)
Frame = +1
Query: 253 FFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTT 432
FF GKE NK +NPDE IL G+ +E +D GIET GGVMT
Sbjct: 384 FFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTK 443
Query: 433 LIKRNXXXXXXXXXXXXXYSDNQ 501
LI RN Y D Q
Sbjct: 444 LIPRNTVIPTKKSQVFTTYQDQQ 466
>At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746590
Length = 682
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/55 (70%), Positives = 47/55 (85%)
Frame = +3
Query: 513 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS 677
I+V +GER M DN LLG+F+L GIPP+PRGVPQIEVTFDIDANGI+ VSA +K+
Sbjct: 487 IRVLQGEREMATDNKLLGEFDLVGIPPSPRGVPQIEVTFDIDANGIVTVSAKDKT 541
Score = 57.6 bits (133), Expect = 7e-09
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGID----FYTSITRARFEELNADLFRSTMEPVEKSLRDA 169
+AK LSS++Q I + + F ++TR+RFE L L T +P + L+DA
Sbjct: 317 KAKIELSSTSQTEINLPFITADASGAKHFNITLTRSRFETLVNHLIERTRDPCKNCLKDA 376
Query: 170 KMDKAQIHDIVLVGGSTRIPKVQKLLQD 253
+ ++ +++LVGG TR+PKVQ ++ +
Sbjct: 377 GISAKEVDEVLLVGGMTRVPKVQSIVAE 404
Score = 40.7 bits (91), Expect = 9e-04
Identities = 31/98 (31%), Positives = 38/98 (38%)
Frame = +1
Query: 208 GWLHSYPQGAEAPARFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXX 387
G + P+ A F GK +K +NPDE IL GD V++
Sbjct: 390 GGMTRVPKVQSIVAEIF-GKSPSKGVNPDEAVAMGAALQGGILRGD----VKELLLLDVT 444
Query: 388 XXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQ 501
GIET GGV T LI RN +DNQ
Sbjct: 445 PLSLGIETLGGVFTRLITRNTTIPTKKSQVFSTAADNQ 482
>At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial,
putative / HSP70, mitochondrial, putative strong
similarity to SP|Q01899 Heat shock 70 kDa protein,
mitochondrial precursor {Phaseolus vulgaris}
Length = 682
Score = 85.0 bits (201), Expect = 4e-17
Identities = 38/55 (69%), Positives = 46/55 (83%)
Frame = +3
Query: 513 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS 677
I+V +GER M DN +LG+F+L GIPPAPRG+PQIEVTFDIDANGI VSA +K+
Sbjct: 482 IKVLQGEREMAADNKVLGEFDLVGIPPAPRGMPQIEVTFDIDANGITTVSAKDKA 536
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGID----FYTSITRARFEELNADLFRSTMEPVEKSLRDA 169
+AK LSS+TQ I + + ++TR++FE L L T P + L+DA
Sbjct: 312 KAKIELSSTTQTEINLPFITADASGAKHLNITLTRSKFEGLVGKLIERTRSPCQNCLKDA 371
Query: 170 KMDKAQIHDIVLVGGSTRIPKVQKLLQD 253
+ ++ +++LVGG TR+PKVQ+++ +
Sbjct: 372 GVTIKEVDEVLLVGGMTRVPKVQEIVSE 399
Score = 39.1 bits (87), Expect = 0.003
Identities = 31/98 (31%), Positives = 37/98 (37%)
Frame = +1
Query: 208 GWLHSYPQGAEAPARFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXX 387
G + P+ E + F GK K +NPDE IL GD V+D
Sbjct: 385 GGMTRVPKVQEIVSEIF-GKSPCKGVNPDEAVAMGAAIQGGILRGD----VKDLLLLDVV 439
Query: 388 XXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQ 501
GIET G V T LI RN +DNQ
Sbjct: 440 PLSLGIETLGAVFTKLIPRNTTIPTKKSQVFSTAADNQ 477
>At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein 70
[Arabidopsis thaliana] GI:6746592; similar to heat shock
70 protein - Spinacia oleracea,PID:g2654208
Length = 718
Score = 84.2 bits (199), Expect = 7e-17
Identities = 38/54 (70%), Positives = 43/54 (79%)
Frame = +3
Query: 513 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEK 674
I V +GER +DN LG F L GIPPAPRGVPQIEV FDIDANGIL+VSA++K
Sbjct: 509 INVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDK 562
Score = 72.5 bits (170), Expect = 2e-13
Identities = 40/87 (45%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGID----FYTSITRARFEELNADLFRSTMEPVEKSLRDA 169
+AK LSS TQ ++ + + D T++TRA+FEEL +DL PVE SLRDA
Sbjct: 339 KAKIELSSLTQTNMSLPFITATADGPKHIETTLTRAKFEELCSDLLDRVRTPVENSLRDA 398
Query: 170 KMDKAQIHDIVLVGGSTRIPKVQKLLQ 250
K+ I +++LVGGSTRIP VQ+L++
Sbjct: 399 KLSFKDIDEVILVGGSTRIPAVQELVR 425
Score = 41.1 bits (92), Expect = 7e-04
Identities = 25/66 (37%), Positives = 30/66 (45%)
Frame = +1
Query: 250 RFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMT 429
R GKE N ++NPDE +L GD V D G+ET GGVMT
Sbjct: 425 RKVTGKEPNVTVNPDEVVALGAAVQAGVLAGD----VSDIVLLDVTPLSIGLETLGGVMT 480
Query: 430 TLIKRN 447
+I RN
Sbjct: 481 KIIPRN 486
>At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746592
Length = 718
Score = 81.4 bits (192), Expect = 5e-16
Identities = 37/54 (68%), Positives = 42/54 (77%)
Frame = +3
Query: 513 IQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEK 674
I V +GER +DN +G F L GIPPAPRGVPQIEV FDIDANGIL+VSA +K
Sbjct: 509 INVLQGEREFVRDNKSIGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSASDK 562
Score = 70.1 bits (164), Expect = 1e-12
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGID----FYTSITRARFEELNADLFRSTMEPVEKSLRDA 169
+AK LSS TQ ++ + + D T++TR +FEEL +DL PVE SLRDA
Sbjct: 339 KAKIELSSLTQTNMSLPFITATADGPKHIETTLTRGKFEELCSDLLDRVRTPVENSLRDA 398
Query: 170 KMDKAQIHDIVLVGGSTRIPKVQKLLQ 250
K+ I +++LVGGSTRIP VQ L++
Sbjct: 399 KLSFKDIDEVILVGGSTRIPAVQDLVR 425
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/66 (39%), Positives = 30/66 (45%)
Frame = +1
Query: 250 RFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMT 429
R GKE N S+NPDE +L GD V D G+ET GGVMT
Sbjct: 425 RKLTGKEPNVSVNPDEVVALGAAVQAGVLSGD----VSDIVLLDVTPLSLGLETLGGVMT 480
Query: 430 TLIKRN 447
+I RN
Sbjct: 481 KIIPRN 486
>At4g16660.1 68417.m02517 heat shock protein 70, putative / HSP70,
putative
Length = 867
Score = 68.9 bits (161), Expect = 3e-12
Identities = 32/84 (38%), Positives = 55/84 (65%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 181
R K LS++T A I ++SL + DF ++ITR +FEEL DL+ ++ P++ L+ + +
Sbjct: 307 RTKEILSANTAAPISVESLHDDRDFRSTITREKFEELCKDLWERSLTPLKDVLKHSGLKI 366
Query: 182 AQIHDIVLVGGSTRIPKVQKLLQD 253
I + L+GG+TR+PK+Q +Q+
Sbjct: 367 DDISAVELIGGATRVPKLQSTIQE 390
>At1g11660.1 68414.m01339 heat shock protein, putative strong
similarity to gb|Z70314 heat-shock protein from
Arabidopsis thaliana and is a member of the PF|00012
Hsp70 protein family
Length = 773
Score = 64.9 bits (151), Expect = 5e-11
Identities = 33/89 (37%), Positives = 53/89 (59%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 181
+ K+ LS++ +A + I+ L E D + I R FE+L+A L + P +K+L D+ +
Sbjct: 271 KVKKVLSANAEAQLNIECLMEEKDVRSFIKREEFEQLSAGLLERLIVPCQKALADSGLSL 330
Query: 182 AQIHDIVLVGGSTRIPKVQKLLQDSLMER 268
QIH + LVG +RIP + K+L SL +R
Sbjct: 331 DQIHSVELVGSGSRIPAISKML-SSLFKR 358
>At2g32120.2 68415.m03926 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 64.1 bits (149), Expect = 8e-11
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = +3
Query: 510 LIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 665
LI ++EGE ++N+LLG F+L GIPPAP+GVP+I V DIDA+ L V A
Sbjct: 462 LIIIYEGEGETVEENHLLGYFKLVGIPPAPKGVPEINVCMDIDASNALRVFA 513
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = +2
Query: 17 LSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHD 196
L+ I +D L G + R FEE+N +F V + LRDA+++ I D
Sbjct: 297 LTDQENVQIEVD-LGNGNKISKVLDRLEFEEVNQKVFEECERLVVQCLRDARVNGGDIDD 355
Query: 197 IVLVGGSTRIPKVQKLLQD 253
+++VGG + IPKV+ ++++
Sbjct: 356 LIMVGGCSYIPKVRTIIKN 374
>At2g32120.1 68415.m03925 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 64.1 bits (149), Expect = 8e-11
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = +3
Query: 510 LIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 665
LI ++EGE ++N+LLG F+L GIPPAP+GVP+I V DIDA+ L V A
Sbjct: 462 LIIIYEGEGETVEENHLLGYFKLVGIPPAPKGVPEINVCMDIDASNALRVFA 513
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = +2
Query: 17 LSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHD 196
L+ I +D L G + R FEE+N +F V + LRDA+++ I D
Sbjct: 297 LTDQENVQIEVD-LGNGNKISKVLDRLEFEEVNQKVFEECERLVVQCLRDARVNGGDIDD 355
Query: 197 IVLVGGSTRIPKVQKLLQD 253
+++VGG + IPKV+ ++++
Sbjct: 356 LIMVGGCSYIPKVRTIIKN 374
>At1g79930.1 68414.m09340 heat shock protein, putative contains Pfam
profile: PF00012 Heat shock hsp70 proteins; similar to
heat-shock proteins GB:CAA94389, GB:AAD55461
[Arabidopsis thaliana]
Length = 831
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/84 (28%), Positives = 46/84 (54%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 181
+ K+ LS++ A + I+ L + D I R FEE++ + P+EK+L DA +
Sbjct: 270 KLKKVLSANPLAPLNIECLMDEKDVRGVIKREEFEEISIPILERVKRPLEKALSDAGLTV 329
Query: 182 AQIHDIVLVGGSTRIPKVQKLLQD 253
+H + ++G +R+P + K+L +
Sbjct: 330 EDVHMVEVIGSGSRVPAMIKILTE 353
>At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/84 (29%), Positives = 45/84 (53%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 181
+ K+ LS++ A + I+ L D I R FEE++ + P+EK+L DA +
Sbjct: 270 KLKKVLSANPMAPLNIECLMAEKDVRGVIKREEFEEISIPILERVKRPLEKALSDAGLTV 329
Query: 182 AQIHDIVLVGGSTRIPKVQKLLQD 253
+H + +VG +R+P + K+L +
Sbjct: 330 EDVHMVEVVGSGSRVPAMIKILTE 353
>At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/84 (29%), Positives = 45/84 (53%)
Frame = +2
Query: 2 RAKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 181
+ K+ LS++ A + I+ L D I R FEE++ + P+EK+L DA +
Sbjct: 270 KLKKVLSANPMAPLNIECLMAEKDVRGVIKREEFEEISIPILERVKRPLEKALSDAGLTV 329
Query: 182 AQIHDIVLVGGSTRIPKVQKLLQD 253
+H + +VG +R+P + K+L +
Sbjct: 330 EDVHMVEVVGSGSRVPAMIKILTE 353
>At1g15740.1 68414.m01888 leucine-rich repeat family protein
Length = 585
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -1
Query: 366 ILHLLRLVTVQDSSLDSCTI-SYGLVRVNRFVELLSIKESCRSFCTLGIR 220
++HL L ++ +LDSC I GLV ++ +EL S++ S + G+R
Sbjct: 351 LVHLKGLTKLESLNLDSCRIGDEGLVHLSGMLELKSLELSDTEVGSNGLR 400
>At2g01730.1 68415.m00101 metallo-beta-lactamase family protein
simliar to SP|P79101 Cleavage and polyadenylation
specificity factor, 73 kDa subunit (CPSF 73 kDa subunit)
{Bos taurus}; contains Pfam profile PF00753:
Metallo-beta-lactamase superfamily
Length = 613
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 525 QILG*VSGLVIRVGGECLSLFSGDGSVTL-DECGHDTSSS 409
+IL VSG I CL + S GS+ L D+C H +SSS
Sbjct: 544 KILKTVSGAQIHESENCLQVASFKGSLCLKDKCMHRSSSS 583
>At1g69570.1 68414.m08001 Dof-type zinc finger domain-containing
protein nearly identical to H-protein promoter binding
factor-2b (Arabidopsis thaliana) GI:3386548
Length = 399
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -2
Query: 263 PLKNLAGASAPWGYEWSHPPVQYRGFEPYPSWHHGETSPLAP 138
P L S+PW Y+WS P F P P ++ G T P+ P
Sbjct: 251 PQVMLPNNSSPWPYQWS-PTGPNASFYPVP-FYWGCTVPIYP 290
>At1g48500.1 68414.m05421 expressed protein ; expression supported
by MPSS
Length = 285
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 404 LRLLEVS*PHSSSVTLPSPLNRLRHSPPTLITNPETHP 517
+ LL + PH+ V+ P P + HS PT T+P T P
Sbjct: 145 IMLLAGNGPHAKPVSQPKPQKLVHHSLPT--TDPPTMP 180
>At1g03080.1 68414.m00282 kinase interacting family protein similar to
kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1744
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -1
Query: 471 SLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTVQDSSL 322
++ GD + TLDE + T S+L E + C K + + LL T+ S+L
Sbjct: 1082 TILQGDNNKTLDEKAYLTKSTLQLEEEKC--KLEDDISLLLSETIYQSNL 1129
>At3g54280.1 68416.m05999 SNF2 domain-containing protein / helicase
domain-containing protein similar to SP|O14981
TBP-associated factor 172 (TAF-172) (TAF(II)170) {Homo
sapiens}; contains PFam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 2049
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 50 DSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVL--VGG 214
D+ FE D +TR R +LN + + +EP+ K + K+ I + VL +GG
Sbjct: 346 DNGFELKDVLNKVTREREIDLNMQVSENELEPLRKRPKIEDPSKSFIDNTVLEVIGG 402
>At3g55150.1 68416.m06125 exocyst subunit EXO70 family protein
contains Pfam domain PF03081: Exo70 exocyst complex
subunit; tomato leucine zipper-containing protein,
Lycopersicon esculentum, PIR:S21495
Length = 636
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 596 RRWDPGQLEFTEQVVIFGHS 537
R+WDP FT+ V +F HS
Sbjct: 54 RKWDPNTPSFTKIVSLFNHS 73
>At2g42820.1 68415.m05301 abscisic acid-responsive HVA22 family
protein contains Pfam profile PF03134: TB2/DP1, HVA22
family
Length = 158
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 141 SQWRSLSVMPRWIRLKSTILYWWVAPLVS 227
S WR L+ +P W LK W V P+ S
Sbjct: 59 SVWRVLAWLPFWPYLKLLFCMWLVLPMFS 87
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,915,242
Number of Sequences: 28952
Number of extensions: 313606
Number of successful extensions: 961
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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