SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0020X.Seq
         (534 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677   126   9e-30
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92...   126   9e-30
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92...   126   9e-30
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence...   126   9e-30
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence...   126   9e-30
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence...   126   9e-30
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence...   126   9e-30
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence...   126   9e-30
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3...   126   9e-30
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1...   126   9e-30
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1...   126   9e-30
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1...   126   9e-30
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ...   126   9e-30
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ...   126   9e-30
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ...   126   9e-30
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ...   126   9e-30
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER...   126   9e-30
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly...   126   9e-30
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER...   126   9e-30
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /...   126   9e-30
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly...   125   2e-29
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu...   124   3e-29
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu...   118   2e-27
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ...   103   7e-23
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha...    78   3e-15
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER...    63   1e-10
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER...    59   2e-09
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi...    54   6e-08
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi...    53   1e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER...    50   7e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit...    50   1e-06
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ...    48   3e-06
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ...    48   3e-06
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER...    48   4e-06
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi...    47   7e-06
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi...    47   7e-06
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi...    47   7e-06
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi...    47   7e-06
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER...    44   6e-05
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER...    42   3e-04
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER...    42   3e-04
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa...    42   3e-04
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa...    42   3e-04
At5g16090.1 68418.m01880 ubiquitin family protein contains INTER...    41   5e-04
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER...    41   6e-04
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER...    40   8e-04
At4g01000.1 68417.m00135 ubiquitin family protein low similarity...    40   8e-04
At2g30100.1 68415.m03663 ubiquitin family protein low similarity...    40   0.001
At1g53980.1 68414.m06149 polyubiquitin-related contains similari...    39   0.002
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1...    39   0.002
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ...    38   0.004
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa...    37   0.010
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER...    36   0.017
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti...    35   0.039
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER...    34   0.052
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER...    34   0.052
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER...    34   0.069
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER...    34   0.069
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER...    34   0.069
At1g11970.1 68414.m01383 hypothetical protein                          33   0.16 
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER...    31   0.48 
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER...    30   1.1  
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-...    29   2.6  
At4g36240.1 68417.m05155 zinc finger (GATA type) family protein ...    29   2.6  
At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal...    28   4.5  
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp...    28   4.5  
At5g12280.1 68418.m01444 hypothetical protein                          27   5.9  
At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal...    27   5.9  
At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal...    27   5.9  
At2g28380.1 68415.m03449 double-stranded RNA-binding domain (DsR...    27   5.9  
At1g73180.1 68414.m08469 eukaryotic translation initiation facto...    27   7.9  

>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
          Length = 382

 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 61  IQKESTLH 68



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 137 IQKESTLH 144



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 213 IQKESTLH 220



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 289 IQKESTLH 296



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 365 IQKESTLH 372


>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
           GI:928809
          Length = 306

 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 61  IQKESTLH 68



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 137 IQKESTLH 144



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 213 IQKESTLH 220



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 289 IQKESTLH 296


>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
           GI:928809
          Length = 306

 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 61  IQKESTLH 68



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 137 IQKESTLH 144



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 213 IQKESTLH 220



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 289 IQKESTLH 296


>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
           senescence-associated protein; identical to GI:870791
          Length = 312

 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 61  IQKESTLH 68



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 137 IQKESTLH 144



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 213 IQKESTLH 220



 Score = 61.7 bits (143), Expect = 3e-10
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKE 113
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKE
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262



 Score = 30.7 bits (66), Expect = 0.64
 Identities = 21/53 (39%), Positives = 29/53 (54%)
 Frame = +1

Query: 91  KLQFKTKRESLPINSG*SLLESSWKMDVPSRSTISRRNPPSTWR*GFVVALRN 249
           K + + K   L  +S  S LESS +MDV   +T SRR+   TW   FVV  ++
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 307


>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
           senescence-associated protein; identical to GI:870791
          Length = 464

 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 61  IQKESTLH 68



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 137 IQKESTLH 144



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 213 IQKESTLH 220



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 289 IQKESTLH 296



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 365 IQKESTLH 372



 Score = 61.7 bits (143), Expect = 3e-10
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKE 113
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414



 Score = 30.7 bits (66), Expect = 0.64
 Identities = 21/53 (39%), Positives = 29/53 (54%)
 Frame = +1

Query: 91  KLQFKTKRESLPINSG*SLLESSWKMDVPSRSTISRRNPPSTWR*GFVVALRN 249
           K + + K   L  +S  S LESS +MDV   +T SRR+   TW   FVV  ++
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 459


>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
           senescence-associated protein; identical to GI:870791
          Length = 388

 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 61  IQKESTLH 68



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 137 IQKESTLH 144



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 213 IQKESTLH 220



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 289 IQKESTLH 296



 Score = 61.7 bits (143), Expect = 3e-10
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKE 113
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338



 Score = 30.7 bits (66), Expect = 0.64
 Identities = 21/53 (39%), Positives = 29/53 (54%)
 Frame = +1

Query: 91  KLQFKTKRESLPINSG*SLLESSWKMDVPSRSTISRRNPPSTWR*GFVVALRN 249
           K + + K   L  +S  S LESS +MDV   +T SRR+   TW   FVV  ++
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 383


>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
           senescence-associated protein; identical to GI:870791
          Length = 464

 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 61  IQKESTLH 68



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 137 IQKESTLH 144



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 213 IQKESTLH 220



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 289 IQKESTLH 296



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 365 IQKESTLH 372



 Score = 61.7 bits (143), Expect = 3e-10
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKE 113
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414



 Score = 30.7 bits (66), Expect = 0.64
 Identities = 21/53 (39%), Positives = 29/53 (54%)
 Frame = +1

Query: 91  KLQFKTKRESLPINSG*SLLESSWKMDVPSRSTISRRNPPSTWR*GFVVALRN 249
           K + + K   L  +S  S LESS +MDV   +T SRR+   TW   FVV  ++
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 459


>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
           senescence-associated protein; identical to GI:870791
          Length = 388

 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 61  IQKESTLH 68



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 137 IQKESTLH 144



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 213 IQKESTLH 220



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 289 IQKESTLH 296



 Score = 61.7 bits (143), Expect = 3e-10
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKE 113
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338



 Score = 30.7 bits (66), Expect = 0.64
 Identities = 21/53 (39%), Positives = 29/53 (54%)
 Frame = +1

Query: 91  KLQFKTKRESLPINSG*SLLESSWKMDVPSRSTISRRNPPSTWR*GFVVALRN 249
           K + + K   L  +S  S LESS +MDV   +T SRR+   TW   FVV  ++
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 383


>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
           GI:304117
          Length = 229

 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 61  IQKESTLH 68



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 137 IQKESTLH 144



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 213 IQKESTLH 220


>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
           GI:166795; similar to N. sylvestris hexameric
           polyubiquitin, GenBank accession number M74101
          Length = 305

 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 61  IQKESTLH 68



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 137 IQKESTLH 144



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 213 IQKESTLH 220



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 289 IQKESTLH 296


>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
           GI:166795; similar to N. sylvestris hexameric
           polyubiquitin, GenBank accession number M74101
          Length = 229

 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 61  IQKESTLH 68



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 137 IQKESTLH 144



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 213 IQKESTLH 220


>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
           GI:166795; similar to N. sylvestris hexameric
           polyubiquitin, GenBank accession number M74101
          Length = 305

 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 61  IQKESTLH 68



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 137 IQKESTLH 144



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 213 IQKESTLH 220



 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 289 IQKESTLH 296


>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
           ribosomal protein S27A (RPS27aC) identical to GI:166933,
           GI:166934
          Length = 157

 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 61  IQKESTLH 68



 Score = 64.1 bits (149), Expect = 6e-11
 Identities = 28/73 (38%), Positives = 39/73 (53%)
 Frame = +2

Query: 251 QEKLYSTPXXXXXXXXXXXXXXXRFYKVDENGKIHRLXRDWTGEQCGAGVFMAVMEDRHY 430
           ++K Y+ P               +FYK+D +GK+ RL ++     CGAG FMA   DRHY
Sbjct: 81  KKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKECPNATCGAGTFMASHFDRHY 140

Query: 431 CGKCHSTLVFNDD 469
           CGKC  T V+  +
Sbjct: 141 CGKCGLTYVYQKE 153


>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
           ribosomal protein L40 (RPL40B) identical to GI:166929,
           GI:166930
          Length = 128

 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 61  IQKESTLH 68


>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
           ribosomal protein S27A (RPS27aB) identical to GI:166936
          Length = 157

 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 61  IQKESTLH 68



 Score = 64.5 bits (150), Expect = 4e-11
 Identities = 29/73 (39%), Positives = 39/73 (53%)
 Frame = +2

Query: 251 QEKLYSTPXXXXXXXXXXXXXXXRFYKVDENGKIHRLXRDWTGEQCGAGVFMAVMEDRHY 430
           ++K Y+ P               +FYKVD +GK+ RL ++     CGAG FMA   DRHY
Sbjct: 81  KKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKECPNATCGAGTFMASHFDRHY 140

Query: 431 CGKCHSTLVFNDD 469
           CGKC  T V+  +
Sbjct: 141 CGKCGLTYVYQKE 153


>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
           ribosomal protein L40 (RPL40A) identical to GI:166930,
           GI:166931
          Length = 128

 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 61  IQKESTLH 68


>At2g35635.1 68415.m04370 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 154

 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 61  IQKESTLH 68



 Score = 84.2 bits (199), Expect = 5e-17
 Identities = 37/66 (56%), Positives = 51/66 (77%)
 Frame = +3

Query: 18  IFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYNIQ 197
           I VKTLTGK I +++EP+DTI+ +K  +++KEGIPP QQRLI+AG+QL D +T  +Y I+
Sbjct: 79  IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIE 138

Query: 198 KESTLH 215
             S LH
Sbjct: 139 GGSVLH 144


>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
           polyubiquitin GI:248337 from [Zea mays]
          Length = 294

 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 61  IQKESTLH 68



 Score =  123 bits (296), Expect = 9e-29
 Identities = 59/68 (86%), Positives = 64/68 (94%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKE IPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 212 IQKESTLH 219



 Score =  119 bits (286), Expect = 1e-27
 Identities = 59/68 (86%), Positives = 64/68 (94%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++ N
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 136 IQKESTLH 143



 Score = 92.7 bits (220), Expect = 1e-19
 Identities = 45/53 (84%), Positives = 48/53 (90%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDG 170
           M IFVKTLTGKTITLEVE S TI+NVKA IQDKEGIPP+QQRLIFAG+QLE G
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280


>At1g31340.1 68414.m03835 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 156

 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 61  IQKESTLH 68



 Score = 87.4 bits (207), Expect = 5e-18
 Identities = 38/66 (57%), Positives = 52/66 (78%)
 Frame = +3

Query: 18  IFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYNIQ 197
           I VKTLTGK I +++EP+DTI+ +K  +++KEGIPP QQRLI+AG+QL D +T  +YNI+
Sbjct: 79  IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138

Query: 198 KESTLH 215
             S LH
Sbjct: 139 GGSVLH 144


>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
           40S ribosomal protein S27A (RPS27aA) strong similarity
           to ubiquitin extension protein (UBQ5) GB:AAA32906
           GI:166934 from (Arabidopsis thaliana)
          Length = 156

 Score =  126 bits (304), Expect = 9e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 61  IQKESTLH 68



 Score = 66.1 bits (154), Expect = 1e-11
 Identities = 30/75 (40%), Positives = 40/75 (53%)
 Frame = +2

Query: 251 QEKLYSTPXXXXXXXXXXXXXXXRFYKVDENGKIHRLXRDWTGEQCGAGVFMAVMEDRHY 430
           ++K Y+ P               +FYKVD +GK+ RL ++     CG G FMA   DRHY
Sbjct: 81  KKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKECPSVSCGPGTFMASHFDRHY 140

Query: 431 CGKCHSTLVFNDDDK 475
           CGKC +T VF   D+
Sbjct: 141 CGKCGTTYVFKKADE 155


>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
           polyubiquitin (ubq12) gene sequence GI:304121 from
           [Arabidopsis thaliana]
          Length = 230

 Score =  125 bits (301), Expect = 2e-29
 Identities = 59/68 (86%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+N+KA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 137 IQKESTLH 144



 Score =  120 bits (289), Expect = 6e-28
 Identities = 58/68 (85%), Positives = 63/68 (92%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEGI P+QQRLIFAG+Q EDGRTL++YN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYN 212

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 213 IQKESTLH 220



 Score =  111 bits (268), Expect = 2e-25
 Identities = 52/68 (76%), Positives = 61/68 (89%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IF+KTLTGKT  LEVE SDTI+NVKA IQD EGIPP+Q RLIFAG+QLEDGRTL++YN
Sbjct: 1   MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60

Query: 192 IQKESTLH 215
           +Q++STLH
Sbjct: 61  VQEDSTLH 68


>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
           polyubiquitin (ubq9) gene sequence GI:304120 from
           [Arabidopsis thaliana]
          Length = 322

 Score =  124 bits (300), Expect = 3e-29
 Identities = 58/68 (85%), Positives = 65/68 (95%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVE SDTI+NVKA IQDKEG+PP+QQRLIFAG+QL+DGRTL++YN
Sbjct: 79  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 139 IQKESTLH 146



 Score =  118 bits (283), Expect = 3e-27
 Identities = 56/68 (82%), Positives = 62/68 (91%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFV+TLT KTI LEVE SDT +NVKA IQDKEGIPP+QQRLIFAG+QLEDGRTL++YN
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 215 IQKESTLH 222



 Score =  112 bits (269), Expect = 2e-25
 Identities = 57/69 (82%), Positives = 61/69 (88%), Gaps = 1/69 (1%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDG-RTLSEY 188
           M IFV TLTGKTITLEVE SDTI+NVKA IQDKE I P+QQRLIFAGEQLEDG  TL++Y
Sbjct: 231 MQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADY 290

Query: 189 NIQKESTLH 215
           NIQKESTLH
Sbjct: 291 NIQKESTLH 299



 Score = 95.5 bits (227), Expect = 2e-20
 Identities = 46/70 (65%), Positives = 57/70 (81%)
 Frame = +3

Query: 6   VKMXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSE 185
           + M I  KTLT KTIT++V  SDTI NVKA IQD EGIP +QQRLIF+G+ L+DGRTL++
Sbjct: 1   MSMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLAD 60

Query: 186 YNIQKESTLH 215
           Y+IQK+S LH
Sbjct: 61  YSIQKDSILH 70


>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
           polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
           thaliana] (Genetics 139 (2), 921-939 (1995))
          Length = 631

 Score =  118 bits (285), Expect = 2e-27
 Identities = 57/68 (83%), Positives = 63/68 (92%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFV+TLTGKTITLEV+ SDTI+NVKA IQDKEGI P QQRLIFAG+QLEDGRTL++YN
Sbjct: 79  MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 139 IQKESTLH 146



 Score =  106 bits (254), Expect = 1e-23
 Identities = 51/66 (77%), Positives = 59/66 (89%)
 Frame = +3

Query: 18  IFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYNIQ 197
           I+ KTLT KTITL+VE SD+I NVKA IQ+KEGIP +QQRLIFAG+QLEDG TL++YNIQ
Sbjct: 5   IYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNIQ 64

Query: 198 KESTLH 215
           KESTLH
Sbjct: 65  KESTLH 70



 Score = 98.3 bits (234), Expect = 3e-21
 Identities = 51/73 (69%), Positives = 58/73 (79%), Gaps = 2/73 (2%)
 Frame = +3

Query: 3   RVKMXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGI--PPNQQRLIFAGEQLEDGRT 176
           R  M IFVKTLT K I LEVE  DTIENVKA +QDKEGI   PN QRLIF G++L+DG T
Sbjct: 316 RCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCT 375

Query: 177 LSEYNIQKESTLH 215
           L++Y+IQKESTLH
Sbjct: 376 LADYSIQKESTLH 388



 Score = 97.5 bits (232), Expect = 5e-21
 Identities = 48/68 (70%), Positives = 55/68 (80%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IF+KTLTGKTI LEVE SDTI NVK  IQ KEGI P+QQ LIF G+QLEDG TL +Y+
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYD 611

Query: 192 IQKESTLH 215
           I K+STL+
Sbjct: 612 IHKKSTLY 619



 Score = 93.9 bits (223), Expect = 6e-20
 Identities = 46/68 (67%), Positives = 53/68 (77%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVK   GK ITLEV  SDTI++VKA IQDK G PP+QQ L+F G QL+DGRTL +YN
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452

Query: 192 IQKESTLH 215
           I+ ESTLH
Sbjct: 453 IRNESTLH 460



 Score = 85.8 bits (203), Expect = 2e-17
 Identities = 47/76 (61%), Positives = 54/76 (71%), Gaps = 5/76 (6%)
 Frame = +3

Query: 3   RVKMXIFVKTL-----TGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLED 167
           R  M IFVK L     TG+   LEVE SDTI+NVKA +QDKE IP +  RLIFAG+ LE 
Sbjct: 235 RGDMYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEG 294

Query: 168 GRTLSEYNIQKESTLH 215
           GRTL+ YNIQK STL+
Sbjct: 295 GRTLAHYNIQKGSTLY 310



 Score = 83.8 bits (198), Expect = 6e-17
 Identities = 45/74 (60%), Positives = 55/74 (74%), Gaps = 7/74 (9%)
 Frame = +3

Query: 12  MXIFVKTLTGK-----TITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQL--EDG 170
           M IFV T +GK     T+TL+VE SDTIENVKA IQD+EG+ P+ QRLIF GE+L  ED 
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214

Query: 171 RTLSEYNIQKESTL 212
           RTL++Y I+  STL
Sbjct: 215 RTLADYGIRNRSTL 228



 Score = 81.4 bits (192), Expect = 3e-16
 Identities = 46/75 (61%), Positives = 51/75 (68%), Gaps = 7/75 (9%)
 Frame = +3

Query: 12  MXIFVKTL-------TGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDG 170
           M IFVKT        T KTITLEVE SDTI+NVK  IQ K GIP ++QRLIF G  L   
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528

Query: 171 RTLSEYNIQKESTLH 215
           RTL +YNIQK ST+H
Sbjct: 529 RTLLDYNIQKGSTIH 543


>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
           profile: PF00240 ubiquitin family
          Length = 158

 Score =  103 bits (247), Expect = 7e-23
 Identities = 48/68 (70%), Positives = 57/68 (83%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IF+KTLTG+ I LEVE  DTIEN+KA IQDK+GIP +QQRLIF G+QLEDG TL++YN
Sbjct: 86  MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYN 145

Query: 192 IQKESTLH 215
           IQ +S LH
Sbjct: 146 IQNDSILH 153


>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
           A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
           from [Arabidopsis thaliana]
          Length = 78

 Score = 78.2 bits (184), Expect = 3e-15
 Identities = 35/68 (51%), Positives = 48/68 (70%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M I VKTLT K I +E+E +DTIE +K  I++KEGIPP  QR+++ G+QL D  T   YN
Sbjct: 1   MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60

Query: 192 IQKESTLH 215
           +++ S LH
Sbjct: 61  LERGSVLH 68


>At1g53950.1 68414.m06145 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 216

 Score = 62.9 bits (146), Expect = 1e-10
 Identities = 30/47 (63%), Positives = 36/47 (76%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAG 152
           M IF+KTLTG+T T EV+ SDTI  +KA  ++KEGIP  QQRLIF G
Sbjct: 50  MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQG 96



 Score = 62.1 bits (144), Expect = 2e-10
 Identities = 31/69 (44%), Positives = 46/69 (66%)
 Frame = +3

Query: 6   VKMXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSE 185
           V M IFV T+  KT  LEV+ SDTI+ +K+ I D+ G P +QQ L   G +L++  T+S+
Sbjct: 139 VLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISD 198

Query: 186 YNIQKESTL 212
           YNI+ ++ L
Sbjct: 199 YNIKPDANL 207



 Score = 27.9 bits (59), Expect = 4.5
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVK 92
          M I +KTL GK I LEVE S    ++K
Sbjct: 1  MHISIKTLEGKRIKLEVEDSSNTIDLK 27


>At5g42220.1 68418.m05139 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 879

 Score = 58.8 bits (136), Expect = 2e-09
 Identities = 27/64 (42%), Positives = 39/64 (60%)
 Frame = +3

Query: 24  VKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYNIQKE 203
           +KTL  +T T +V  ++T+   K  I  + G+P  QQRLIF G  L+D   LSEY+++  
Sbjct: 28  IKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYHLENG 87

Query: 204 STLH 215
            TLH
Sbjct: 88  HTLH 91


>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
           to DNA repair by nucleotide excision (NER) RAD23
           protein, isoform I GI:1914683 from [Daucus carota]
          Length = 378

 Score = 54.0 bits (124), Expect = 6e-08
 Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEG--IPPNQQRLIFAGEQLEDGRTLSE 185
           M IFVKTL+G    +EV+P+D + +VK  I+  +G   P  +Q LI  G+ L+D  TL E
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60

Query: 186 YNIQKES 206
            N+ + S
Sbjct: 61  NNVVENS 67


>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
           to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
           {Saccharomyces cerevisiae}; contains Pfam profiles
           PF00240: Ubiquitin family, PF00632: HECT-domain
           (ubiquitin-transferase)
          Length = 873

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 25/69 (36%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
 Frame = +3

Query: 9   KMXIFVKTLTG-KTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSE 185
           ++ IFV+ ++G KTI +  E  DT+E +   I+ K  IP  +QR+I+ G+QL+   +L+ 
Sbjct: 94  RLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTY 153

Query: 186 YNIQKESTL 212
           Y+I+++++L
Sbjct: 154 YSIEQDASL 162


>At2g17190.1 68415.m01985 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 538

 Score = 50.4 bits (115), Expect = 7e-07
 Identities = 23/70 (32%), Positives = 37/70 (52%)
 Frame = +3

Query: 6   VKMXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSE 185
           V + + V+   G   ++      T+E+ K  I     +P NQQRLI+ G  L+D +TL  
Sbjct: 16  VAVAVNVRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLS 75

Query: 186 YNIQKESTLH 215
           Y +Q + T+H
Sbjct: 76  YGLQADHTVH 85


>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
           to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
           GI:9937505; contains Pfam profiles PF00240: Ubiquitin
           family, PF00627: UBA/TS-N domain
          Length = 551

 Score = 49.6 bits (113), Expect = 1e-06
 Identities = 20/64 (31%), Positives = 35/64 (54%)
 Frame = +3

Query: 24  VKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYNIQKE 203
           ++   G   +++     T+E+ K  +     +P NQQRLI+ G  L+D +TL  Y +Q +
Sbjct: 22  IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81

Query: 204 STLH 215
            T+H
Sbjct: 82  HTIH 85


>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
           profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
           domain;
          Length = 299

 Score = 48.4 bits (110), Expect = 3e-06
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEG---IPPNQQRLIFAGEQLEDGRTLS 182
           M IFVKTL G    +EV+P D++ +VK  I+  +G    P  +Q LI  G+ L+D  T+ 
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 183 EYNIQKES 206
           E  + + S
Sbjct: 61  ENKVAENS 68


>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
           profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
           domain;
          Length = 419

 Score = 48.4 bits (110), Expect = 3e-06
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEG---IPPNQQRLIFAGEQLEDGRTLS 182
           M IFVKTL G    +EV+P D++ +VK  I+  +G    P  +Q LI  G+ L+D  T+ 
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 183 EYNIQKES 206
           E  + + S
Sbjct: 61  ENKVAENS 68


>At3g13235.1 68416.m01666 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 414

 Score = 48.0 bits (109), Expect = 4e-06
 Identities = 22/67 (32%), Positives = 40/67 (59%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M I V T   + ITL+V+  +T+ENVKA ++ +  +P  QQ+L++ G ++ +   LS   
Sbjct: 1   MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60

Query: 192 IQKESTL 212
           ++ +  L
Sbjct: 61  VKDDDLL 67


>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
           to DNA repair by nucleotide excision (NER) RAD23
           protein, isoform II GI:1914685 from [Daucus carota];
           contains Pfam profiles PF00240: Ubiquitin family,
           PF00627: UBA/TS-N domain
          Length = 351

 Score = 47.2 bits (107), Expect = 7e-06
 Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEG---IPPNQQRLIFAGEQLEDGRTLS 182
           M + VKTL G    + V PSDTI  VK  I+D +G    P  QQ LI  G+ L+D  +L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 183 EYNIQKESTL 212
           E  + +E  L
Sbjct: 61  ENKVTEEGFL 70


>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
           to DNA repair by nucleotide excision (NER) RAD23
           protein, isoform II GI:1914685 from [Daucus carota];
           contains Pfam profiles PF00240: Ubiquitin family,
           PF00627: UBA/TS-N domain
          Length = 365

 Score = 47.2 bits (107), Expect = 7e-06
 Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEG---IPPNQQRLIFAGEQLEDGRTLS 182
           M + VKTL G    + V PSDTI  VK  I+D +G    P  QQ LI  G+ L+D  +L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 183 EYNIQKESTL 212
           E  + +E  L
Sbjct: 61  ENKVTEEGFL 70


>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
           to DNA repair by nucleotide excision (NER) RAD23
           protein, isoform II GI:1914685 from [Daucus carota];
           contains Pfam profiles PF00240: Ubiquitin family,
           PF00627: UBA/TS-N domain
          Length = 371

 Score = 47.2 bits (107), Expect = 7e-06
 Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEG---IPPNQQRLIFAGEQLEDGRTLS 182
           M + VKTL G    + V PSDTI  VK  I+D +G    P  QQ LI  G+ L+D  +L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 183 EYNIQKESTL 212
           E  + +E  L
Sbjct: 61  ENKVTEEGFL 70


>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
           to DNA repair by nucleotide excision (NER) RAD23
           protein, isoform II GI:1914685 from [Daucus carota]
          Length = 368

 Score = 47.2 bits (107), Expect = 7e-06
 Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQD---KEGIPPNQQRLIFAGEQLEDGRTLS 182
           M + VKTL G    + V P+DTI  VK  I+D   K+  P  QQ LI  G+ L+D  TL 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 183 EYNIQKESTL 212
           E  + +E  L
Sbjct: 61  ENKVTEEGFL 70


>At4g02970.1 68417.m00404 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 270

 Score = 44.0 bits (99), Expect = 6e-05
 Identities = 21/67 (31%), Positives = 38/67 (56%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M +++ T TG + ++ ++  +T+  +K  I+  +GIP ++Q L   G+ LED     +Y 
Sbjct: 1   MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60

Query: 192 IQKESTL 212
           I  ES L
Sbjct: 61  ILFESRL 67


>At4g03370.1 68417.m00459 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 295

 Score = 41.5 bits (93), Expect = 3e-04
 Identities = 20/68 (29%), Positives = 38/68 (55%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M + V+  +G T ++++   DT+   K  I+  + IP ++Q + F G+ LED   + E++
Sbjct: 1   MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60

Query: 192 IQKESTLH 215
           I +   LH
Sbjct: 61  ILQNPLLH 68


>At4g03350.1 68417.m00457 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 263

 Score = 41.5 bits (93), Expect = 3e-04
 Identities = 21/67 (31%), Positives = 37/67 (55%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M + + T TG + ++ ++  +T+  +K  I+  +GIP ++Q L   G+ LED     +Y 
Sbjct: 1   MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60

Query: 192 IQKESTL 212
           I  ES L
Sbjct: 61  ILFESLL 67


>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
           family protein / ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 566

 Score = 41.5 bits (93), Expect = 3e-04
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +3

Query: 24  VKTLTGKTITLEVEPSDTIENVKATIQDKEG--IPPNQQRLIFAGEQLEDGRTLSEYNIQ 197
           VKT  GK     VE    I  VK  I  K G  + P++Q +++ GE+LED   +++    
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174

Query: 198 KESTLH 215
            +S LH
Sbjct: 175 DDSVLH 180


>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
           family protein / ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 566

 Score = 41.5 bits (93), Expect = 3e-04
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +3

Query: 24  VKTLTGKTITLEVEPSDTIENVKATIQDKEG--IPPNQQRLIFAGEQLEDGRTLSEYNIQ 197
           VKT  GK     VE    I  VK  I  K G  + P++Q +++ GE+LED   +++    
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174

Query: 198 KESTLH 215
            +S LH
Sbjct: 175 DDSVLH 180


>At5g16090.1 68418.m01880 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 142

 Score = 41.1 bits (92), Expect = 5e-04
 Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEG---IPPNQQRLIFAGEQLEDGRTLS 182
           M I VKTL G    +EV+P+D++  VK  I+   G    P  QQ LI   E+L D  T+ 
Sbjct: 1   MKIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTME 60

Query: 183 EYNIQKESTL 212
              +  +S +
Sbjct: 61  ANKVFDKSVI 70


>At5g11080.1 68418.m01294 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 352

 Score = 40.7 bits (91), Expect = 6e-04
 Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = +3

Query: 18  IFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQ-RLIFAGEQLEDGRTLSEYNI 194
           I +K L   T TL VE +  + ++K  I    G+ P +Q RL+F G  L++ + LS+Y++
Sbjct: 13  IKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDYHV 72

Query: 195 QKESTLH 215
           ++  TL+
Sbjct: 73  EEGHTLY 79


>At4g05230.1 68417.m00789 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 206

 Score = 40.3 bits (90), Expect = 8e-04
 Identities = 20/67 (29%), Positives = 36/67 (53%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M +F +T +G T  +E+   DT+  +K  I+  + IP ++Q L+F G  L+D   + +  
Sbjct: 1   MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60

Query: 192 IQKESTL 212
           I   S +
Sbjct: 61  ILNHSRI 67


>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
           SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
           profile PF00240: Ubiquitin family
          Length = 415

 Score = 40.3 bits (90), Expect = 8e-04
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVE-PSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSE 185
           +  FV+ L GK++TL    P    E +K  I ++  IP + QRLI  G Q+ DG  +S+
Sbjct: 9   LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAISQ 67


>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
           SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
           (Ras-binding protein Sur-8) {Homo sapiens}; contains
           Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
           repeat, PF00560: Leucine Rich Repeat
          Length = 897

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 18/52 (34%), Positives = 32/52 (61%)
 Frame = +3

Query: 39  GKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYNI 194
           GK+I L V P  T++++K+ +Q    + P  Q+LIF G+ L +  TL + ++
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDV 595


>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
           to polyubiquitin GI:166336 from (Aglaothamnion
           neglectum)
          Length = 91

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 20/38 (52%), Positives = 25/38 (65%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPP 125
           M IFV TL GKT  LEV+ S+ I+ VK  I D+  +PP
Sbjct: 49  MSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84



 Score = 27.9 bits (59), Expect = 4.5
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 12 MXIFVKTLTGKTITLEVEPSDTIENVK 92
          M I +KT  GKTI LE+E S    ++K
Sbjct: 1  MKILIKTEKGKTINLELEDSSETIDIK 27


>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
           [Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
           Pfam domains, PF00439: Bromodomain and PF00240:
           Ubiquitin family
          Length = 1919

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
 Frame = +3

Query: 3   RVKMXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQ-RLIFAGEQLEDGRTL 179
           R  M I VK+L GK   L V   +++ +++A    K      +  ++ + G++L+D ++L
Sbjct: 658 RGSMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSL 717

Query: 180 SEYNIQKESTLH 215
           +  N+Q  S +H
Sbjct: 718 AAQNVQPNSLVH 729


>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
           bromodomain-containing protein low similarity to
           SP|P51123 Transcription initiation factor TFIID 230 kDa
           subunit {Drosophila melanogaster}; contains Pfam
           profiles: PF00439 bromodomain, PF00240: Ubiquitin family
          Length = 1700

 Score = 37.9 bits (84), Expect = 0.004
 Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQ-RLIFAGEQLEDGRTLSEY 188
           M I +  L GK   L V   +++ ++KA    K      +  ++ + G++LED ++L+E 
Sbjct: 500 MKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQ 559

Query: 189 NIQKESTLH 215
           N+Q  S +H
Sbjct: 560 NVQPNSLVH 568


>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
           family protein / ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain, Pfam profile
           PF00454:  Phosphatidylinositol 3- and 4-kinase
          Length = 574

 Score = 36.7 bits (81), Expect = 0.010
 Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
 Frame = +3

Query: 18  IFVKTLTGKTITLEVEPSDTIENVKATIQDKE---GIPPNQQRLIFAGEQLEDGRTLSEY 188
           I V+T+ GK   L VE S  +  VK  I  KE   GIP + + L   GE+L+D R +++ 
Sbjct: 111 ISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDL 169

Query: 189 NIQKESTLH 215
               ++ +H
Sbjct: 170 CQNGDNVIH 178


>At4g05250.1 68417.m00793 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 318

 Score = 35.9 bits (79), Expect = 0.017
 Identities = 18/52 (34%), Positives = 30/52 (57%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLED 167
           M +F +T +G    +E+   DT+  +K  I+  + IP ++Q LIF G  L+D
Sbjct: 1   MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52


>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
           SP:P42740 from [Aglaothamnion neglectum]
          Length = 79

 Score = 34.7 bits (76), Expect = 0.039
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGE---QLEDGRTLS 182
           M +F+    GK   +EVE + TI ++K  I D  G+    Q L   G+   ++  G T+ 
Sbjct: 1   MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60

Query: 183 EYNIQKESTLH 215
           +Y I+     H
Sbjct: 61  DYKIKACDIFH 71


>At4g03360.1 68417.m00458 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 284

 Score = 34.3 bits (75), Expect = 0.052
 Identities = 17/65 (26%), Positives = 35/65 (53%)
 Frame = +3

Query: 18  IFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYNIQ 197
           + ++  +G + T++V   DT+  +K  I+  +G P ++Q LIF  + L+D   +    I+
Sbjct: 4   VIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIR 63

Query: 198 KESTL 212
             S +
Sbjct: 64  HNSRI 68


>At4g02950.1 68417.m00402 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 318

 Score = 34.3 bits (75), Expect = 0.052
 Identities = 17/65 (26%), Positives = 35/65 (53%)
 Frame = +3

Query: 18  IFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYNIQ 197
           + ++  +G + T++V   DT+  +K  I+  +G P ++Q LIF  + L+D   +    I+
Sbjct: 38  VIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIR 97

Query: 198 KESTL 212
             S +
Sbjct: 98  HNSRI 102


>At5g14360.1 68418.m01678 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 163

 Score = 33.9 bits (74), Expect = 0.069
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 54  LEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLED 167
           L +E + T   +K  +    G+ P QQRL+F G++ ED
Sbjct: 83  LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120


>At4g05310.1 68417.m00809 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 415

 Score = 33.9 bits (74), Expect = 0.069
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAG 152
           M   V+ L G +  +EVE +DT+  VK  I+  + +P ++Q LI  G
Sbjct: 1   MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47


>At4g05270.1 68417.m00797 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 129

 Score = 33.9 bits (74), Expect = 0.069
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAG 152
           M   V+ L G +  LEV+  DT+  VK  I+  + IP ++Q LI  G
Sbjct: 1   MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47


>At1g11970.1 68414.m01383 hypothetical protein
          Length = 99

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +3

Query: 3   RVKMXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIP 122
           R +  +  + L+ K I +E++P D IE +K  I+++ GIP
Sbjct: 40  RQRFKVKSQFLSEKKIDIEIDPMDKIEQIKEGIEEEIGIP 79


>At5g40630.1 68418.m04932 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 165

 Score = 31.1 bits (67), Expect = 0.48
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +3

Query: 24  VKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLED 167
           V T++  +  + ++ + T   +K  I    GI   +QRL+F G++ ED
Sbjct: 83  VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130


>At1g64470.1 68414.m07309 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 213

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATI-QDKEGIPP-NQQRLIFAGEQLEDGRTLSE 185
           + + V T  GK     V+    +  +K  I ++ +G P  + Q ++F GE+L+D R +  
Sbjct: 111 LLVTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDG 170

Query: 186 YNIQKESTLH 215
                 S +H
Sbjct: 171 ICKDGNSVIH 180


>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
           GTP-binding protein GUF1 - Saccharomyces cerevisiae,
           PIR:S50374
          Length = 661

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +3

Query: 33  LTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDG 170
           +TG   T E    DTI   K T++   G  P  + ++F+G    DG
Sbjct: 323 VTGMRTTKEARIGDTIYRTKTTVEPLPGFKP-VRHMVFSGVYPADG 367


>At4g36240.1 68417.m05155 zinc finger (GATA type) family protein
           NTL1 protein, curled-leaved tobacco, PIR2:S46419
          Length = 238

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +1

Query: 403 HGGDGGPSLLREVSQHAGLQRRRQITKAPLACKKRCDCC 519
           +GG      LR    H G+Q+  Q    PL  K  C+ C
Sbjct: 153 YGGVVQQQQLRRCCSHCGVQKTPQWRMGPLGAKTLCNAC 191


>At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal,
           putative / glycolate oxidase, putative / short chain
           alpha-hydroxy acid oxidase, putative similar to
           (S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
           oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
           [Spinacia oleracea] SWISS-PROT:P05414
          Length = 363

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -2

Query: 200 LLDIVLREGTSIFQLLSSKDQPLLIGRDSLFVL 102
           LLD  +R GT +F+ L+   Q +LIGR  ++ L
Sbjct: 281 LLDGGVRRGTDVFKALALGAQAVLIGRPIIYGL 313


>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
           domain-containing protein / ubiquitin family protein
           similar to SP|Q15459 Splicing factor 3 subunit 1
           (Spliceosome associated protein 114) {Homo sapiens};
           contains Pfam profiles PF00240: Ubiquitin family,
           PF01805: Surp module
          Length = 785

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +3

Query: 69  SDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYNI 194
           S+ + ++K  I  +  IP N+Q+L      L+D  +L+ YN+
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNV 767


>At5g12280.1 68418.m01444 hypothetical protein
          Length = 419

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +3

Query: 42  KTITLEVEP-SDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYNI 194
           K + + V+  S+ + ++K  I  +   P N+Q+L      L+D  +L+ YN+
Sbjct: 357 KVVKITVQSLSENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNV 408


>At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal,
           putative / glycolate oxidase, putative / short chain
           alpha-hydroxy acid oxidase, putative similar to
           (S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
           oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
           [Spinacia oleracea] SWISS-PROT:P05414
          Length = 368

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -2

Query: 251 AFLSATTKPQRQVEGGF--LLDIVLREGTSIFQLLSSKDQPLLIGRDSLFVL 102
           A + A  +  + VEG     LD  +R GT +F+ L+     + +GR SLF L
Sbjct: 264 ATIVALEEVVKAVEGRIPVFLDGGVRRGTDVFKALALGASGVFVGRPSLFSL 315


>At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal,
           putative / glycolate oxidase, putative / short chain
           alpha-hydroxy acid oxidase, putative similar to Chain A,
           Glycolate Oxidase (E.C.1.1.3.15) Mutant With Tyr 24
           Replaced By Phe (Y24f) gi|999542
          Length = 363

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -2

Query: 200 LLDIVLREGTSIFQLLSSKDQPLLIGRDSLFVL 102
           LLD  +R GT +F+ L+   Q +LIGR  ++ L
Sbjct: 281 LLDGGVRRGTDVFKALALGAQAVLIGRPIVYGL 313


>At2g28380.1 68415.m03449 double-stranded RNA-binding domain
           (DsRBD)-containing protein contains Pfam profile
           PF00035: Double-stranded RNA binding motif
          Length = 434

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 28  RPSREKPSPLRSSRQIPSRM*KLQFKTKRESLPINSG 138
           RP+  +PSP  +SR +P    K   ++ R SL   SG
Sbjct: 213 RPTSPQPSPATTSRILPFICPKQPSRSSRSSLAATSG 249


>At1g73180.1 68414.m08469 eukaryotic translation initiation
           factor-related similar to eukaryotic translation
           initiation factor 2A (GI:21956484) [Homo sapiens];
           similar to Eukaryotic translation initiation factor 3
           subunit 9 (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b)
           (Swiss-Prot:P55884) [Homo sapiens]
          Length = 513

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 269 WSKASLAFLSATTKPQRQVEGG 204
           WS     FL+A+T P+RQ++ G
Sbjct: 364 WSPDGRYFLTASTAPRRQIDNG 385


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,513,163
Number of Sequences: 28952
Number of extensions: 233720
Number of successful extensions: 813
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 984125600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -