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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0025
         (832 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g01500.1 68418.m00064 mitochondrial substrate carrier family ...    31   0.94 
At3g05290.1 68416.m00577 mitochondrial substrate carrier family ...    31   1.2  
At3g56590.1 68416.m06293 hydroxyproline-rich glycoprotein family...    30   1.6  
At5g27520.1 68418.m03293 mitochondrial substrate carrier family ...    29   2.9  
At4g24570.1 68417.m03521 mitochondrial substrate carrier family ...    29   3.8  
At5g48970.1 68418.m06059 mitochondrial substrate carrier family ...    29   5.0  
At3g51870.1 68416.m05688 mitochondrial substrate carrier family ...    29   5.0  
At1g69010.1 68414.m07896 basic helix-loop-helix (bHLH) family pr...    29   5.0  
At1g12380.1 68414.m01431 expressed protein                             29   5.0  
At4g17050.1 68417.m02571 expressed protein                             28   6.6  
At3g19050.1 68416.m02420 kinesin motor protein-related contains ...    28   6.6  
At2g37890.1 68415.m04651 mitochondrial substrate carrier family ...    28   6.6  
At1g25380.1 68414.m03150 mitochondrial substrate carrier family ...    28   6.6  
At3g21390.1 68416.m02700 mitochondrial substrate carrier family ...    28   8.7  
At1g74240.1 68414.m08598 mitochondrial substrate carrier family ...    28   8.7  
At1g72820.1 68414.m08419 mitochondrial substrate carrier family ...    28   8.7  

>At5g01500.1 68418.m00064 mitochondrial substrate carrier family
           protein contains Pfam profile: PF00153 mitochondrial
           carrier protein
          Length = 415

 Score = 31.1 bits (67), Expect = 0.94
 Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
 Frame = +2

Query: 518 AIVSIYKDDGILGFLHGLIPKVLGDLTCLAVTGVLAYYVNKYFVKTKDLRYYTIPLL--- 688
           AI  I K++GI G+  G +P+V+  +   AV  + AY   K   + KD +   +  L   
Sbjct: 164 AITLIGKEEGIKGYWKGNLPQVIRIVPYSAVQ-LFAYETYKKLFRGKDGQLSVLGRLGAG 222

Query: 689 --TFITST-ITYPMVVVSTCMAV 748
               +TST ITYP+ V+   +AV
Sbjct: 223 ACAGMTSTLITYPLDVLRLRLAV 245


>At3g05290.1 68416.m00577 mitochondrial substrate carrier family
           protein contains Pfam profile: PF00153 mitochondrial
           carrier protein
          Length = 322

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +2

Query: 491 RRTLQLLLGAIVSIYKDDGILGFLHGLIPKVL 586
           RRT + + G + +I++ +G+LGF  GL  ++L
Sbjct: 248 RRTRKTIPGVVYAIWRKEGMLGFFKGLQAQIL 279


>At3g56590.1 68416.m06293 hydroxyproline-rich glycoprotein family
           protein 
          Length = 477

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +2

Query: 701 STITYPMVVVSTCMAVAGSSLRLATLRQCQTTLHGKYAG 817
           ST+  P +V S+ +   GSS RL  L Q  T+ H K  G
Sbjct: 256 STVAPPTIVHSSVLLTFGSSSRLKQLAQTITSSHSKNLG 294


>At5g27520.1 68418.m03293 mitochondrial substrate carrier family
           protein
          Length = 321

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +2

Query: 491 RRTLQLLLGAIVSIYKDDGILGFLHGLIPKVL 586
           +R  + + G + +I+K +GILGF  GL  ++L
Sbjct: 250 KRIRKTIPGVVYAIWKKEGILGFFKGLQAQIL 281


>At4g24570.1 68417.m03521 mitochondrial substrate carrier family
           protein contains Pfam profile: PF00153 mitochondrial
           carrier protein
          Length = 313

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +1

Query: 85  HPMEYAKVLIQLGYEPLAPRRSTTLFGRPAMILPN 189
           HP++  KV +QL  E  AP  +T    RPA+  PN
Sbjct: 21  HPLDLIKVRLQLHGE--APSTTTVTLLRPALAFPN 53


>At5g48970.1 68418.m06059 mitochondrial substrate carrier family
           protein contains Pfam profile: PF00153 mitochondrial
           carrier protein
          Length = 339

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/67 (23%), Positives = 30/67 (44%)
 Frame = +1

Query: 79  ICHPMEYAKVLIQLGYEPLAPRRSTTLFGRPAMILPNVFQYIKYIKASDGFFGCYRGLSQ 258
           +CHP++  K   Q+      PR    +  R      N+   ++ I  S+G+ G Y+G+  
Sbjct: 255 VCHPLDVVKKRFQIEGLQRHPRYGARVERRAYR---NMLDGLRQIMISEGWHGLYKGIVP 311

Query: 259 ECLVLSP 279
             +  +P
Sbjct: 312 STVKAAP 318


>At3g51870.1 68416.m05688 mitochondrial substrate carrier family
           protein peroxisomal Ca-dependent solute carrier -
           Oryctolagus cuniculus, EMBL:AF004161
          Length = 381

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
 Frame = +2

Query: 524 VSIYKDDGILGFLHGLIPKVLGDLTCLAVTGVLAYYVNK----YFVKTKDLRYYTIPLLT 691
           +S+ +D+GI  F +GL P ++G    +AV   +   V K     + K       T  L  
Sbjct: 229 LSMLRDEGIASFYYGLGPSLVGIAPYIAVNFCIFDLVKKSLPEEYRKKAQSSLLTAVLSA 288

Query: 692 FITSTITYPMVVVSTCMAVAGS 757
            I +   YP+  V   M + G+
Sbjct: 289 GIATLTCYPLDTVRRQMQMRGT 310


>At1g69010.1 68414.m07896 basic helix-loop-helix (bHLH) family
           protein contains Pfam profile: PF00010 helix-loop-helix
           DNA-binding domain
          Length = 311

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +1

Query: 172 AMILPNVFQYIKYIKAS-DGFFGCYRGLSQECLVLSPQVNSHRR 300
           A  L  V  Y++Y++     + G Y G SQE   L+P  N+H R
Sbjct: 82  ASFLLEVIDYVQYLQEKVQKYEGSYPGWSQEPTKLTPWRNNHWR 125


>At1g12380.1 68414.m01431 expressed protein
          Length = 793

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 197 WKTLGNIMAGRPNRVVDRRGAKGSYPSWIKTF 102
           W +  N+  G   +VV+RR  K  +P+W   F
Sbjct: 574 WDSKFNVGEGHVEKVVERRFKKSYHPAWAAAF 605


>At4g17050.1 68417.m02571 expressed protein
          Length = 298

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +1

Query: 694 YNKHNNIS-NGCGIYLYGSSWF*FKAGNPPAM-PNYPSW 804
           YN+H  +   G GIY  G +W+  +AG+   M P  P W
Sbjct: 238 YNQHGLLLLEGQGIYRLGDNWYPVQAGDVIWMAPFVPQW 276


>At3g19050.1 68416.m02420 kinesin motor protein-related contains
           Pfam profile: PF00225 Kinesin motor domain; contains
           non-consensus splice site (GC) at intron 12
          Length = 2722

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 10/28 (35%), Positives = 22/28 (78%)
 Frame = -2

Query: 762 KLEPATAIQVDTTTIGYVIVLVINVSNG 679
           +L+ A +I    +T+G+VI+++++V+NG
Sbjct: 443 RLKEAASINKSLSTLGHVIMVLVDVANG 470


>At2g37890.1 68415.m04651 mitochondrial substrate carrier family
           protein contains Pfam profile: PF00153 mitochondrial
           carrier protein
          Length = 337

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 163 GRPAMILPNVFQYIKYIKASDGFFGCYRGLSQECLVLSPQV 285
           GR  +    +F   K+I  S+GF G YRG+  E   + P V
Sbjct: 278 GRARVYNTGLFGTFKHIFKSEGFKGIYRGILPEYYKVVPGV 318


>At1g25380.1 68414.m03150 mitochondrial substrate carrier family
           protein contains Pfam profile: PF00153 mitochondrial
           carrier protein
          Length = 363

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 23/91 (25%), Positives = 40/91 (43%)
 Frame = +1

Query: 7   DCQNMDEIEKERIAALPSQILVTTICHPMEYAKVLIQLGYEPLAPRRSTTLFGRPAMILP 186
           D +++ E+     A   +  +  T   P++  K  +Q+   P AP        R  +I+ 
Sbjct: 10  DYRSIREVAANAGAGATAGAIAATFVCPLDVIKTRLQVLGLPEAPASGQ----RGGVIIT 65

Query: 187 NVFQYIKYIKASDGFFGCYRGLSQECLVLSP 279
           ++   IK     +G+ G YRGLS   + L P
Sbjct: 66  SLKNIIK----EEGYRGMYRGLSPTIIALLP 92


>At3g21390.1 68416.m02700 mitochondrial substrate carrier family
           protein
          Length = 335

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 17/79 (21%), Positives = 33/79 (41%)
 Frame = +1

Query: 43  IAALPSQILVTTICHPMEYAKVLIQLGYEPLAPRRSTTLFGRPAMILPNVFQYIKYIKAS 222
           +  L S  +   +CHP++  K   Q+      P+    +         N+F  +  I  S
Sbjct: 239 LCGLASGTVSKLVCHPLDVVKKRFQVEGLQRHPKYGARV---ELNAYKNMFDGLGQILRS 295

Query: 223 DGFFGCYRGLSQECLVLSP 279
           +G+ G Y+G+    +  +P
Sbjct: 296 EGWHGLYKGIVPSTIKAAP 314


>At1g74240.1 68414.m08598 mitochondrial substrate carrier family
           protein contains Pfam profile: PF00153 mitochondrial
           carrier protein
          Length = 364

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = +2

Query: 512 LGAIVSIYKDDGILGFLHGLIPKVLGDLTCLAVTGVLAYYVNKYF 646
           L A+  I++ +G  GF  G +P+V+  L   A+T +   ++   F
Sbjct: 292 LDAVGQIWRKEGPQGFFRGSVPRVMWYLPASALTFMAVEFLRDNF 336


>At1g72820.1 68414.m08419 mitochondrial substrate carrier family
           protein contains Pfam profile: PF00153 mitochondrial
           carrier protein
          Length = 349

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 184 PNVFQYIKYIKASDGFFGCYRGLSQECLVLS 276
           P++ Q ++ +    G+  CYRGL   C  +S
Sbjct: 291 PSIGQTVRNLVREGGWTACYRGLGPRCASMS 321


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,319,121
Number of Sequences: 28952
Number of extensions: 425009
Number of successful extensions: 1090
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1911862400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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