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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30013
         (509 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g51840.1 68416.m05685 short-chain acyl-CoA oxidase identical ...    95   3e-20
At3g45300.1 68416.m04891 isovaleryl-CoA-dehydrogenase (IVD) iden...    86   1e-17
At5g65110.1 68418.m08191 acyl-CoA oxidase (ACX2) identical to ac...    52   2e-07
At2g35690.1 68415.m04377 acyl-CoA oxidase, putative strong simil...    45   3e-05
At4g16760.1 68417.m02531 acyl-CoA oxidase (ACX1) identical to ac...    42   3e-04
At1g06290.1 68414.m00665 acyl-CoA oxidase (ACX3) identical to ac...    40   0.001
At3g06810.1 68416.m00808 acyl-CoA dehydrogenase-related low simi...    38   0.005
At1g06310.1 68414.m00667 acyl-CoA oxidase, putative strong simil...    36   0.012
At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger) fa...    29   1.4  
At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger) fa...    29   1.4  
At1g70440.1 68414.m08104 hypothetical protein                          29   1.4  
At1g74820.1 68414.m08668 cupin family protein similar to germin-...    29   2.4  
At2g33580.1 68415.m04115 protein kinase family protein / peptido...    28   3.2  
At2g26900.1 68415.m03227 bile acid:sodium symporter family prote...    28   3.2  
At5g55910.1 68418.m06972 protein kinase, putative contains prote...    27   5.5  
At5g24750.1 68418.m02921 expressed protein                             27   5.5  
At4g26610.1 68417.m03835 protein kinase, putative similar to pro...    27   5.5  
At2g04030.2 68415.m00372 heat shock protein, putative strong sim...    27   5.5  
At2g04030.1 68415.m00371 heat shock protein, putative strong sim...    27   5.5  
At5g64150.1 68418.m08055 methylase family protein contains TIGRf...    27   7.3  
At5g47750.1 68418.m05899 protein kinase, putative similar to pro...    27   7.3  
At3g45130.1 68416.m04871 cycloartenol synthase, putative / 2,3-e...    27   7.3  

>At3g51840.1 68416.m05685 short-chain acyl-CoA oxidase identical to
           Short-chain acyl CoA oxidase [Arabidopsis thaliana]
           GI:5478795; contains InterPro entry IPR006089: Acyl-CoA
           dehydrogenase
          Length = 436

 Score = 94.7 bits (225), Expect = 3e-20
 Identities = 50/127 (39%), Positives = 77/127 (60%), Gaps = 1/127 (0%)
 Frame = +2

Query: 2   GCAGVSYVTYGLITRELDGVDSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGEL 181
           GC G+S     + T E+  VD+S  + + V SSL M +I + G+E QK+KYLP +A    
Sbjct: 109 GCPGLSITANAIATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNT 168

Query: 182 IGCFGLTEPNFGSDAGGLVTRAKHDAKNKCYVLSGSKTWITNAPIADIIIVWAKD-DAGK 358
           + C+ LTEP+ GSDA GL T A        + ++G K WI N+  AD++I++A++    +
Sbjct: 169 VACWALTEPDNGSDASGLGTTATKVEGG--WKINGQKRWIGNSTFADLLIIFARNTTTNQ 226

Query: 359 VRGFIVR 379
           + GFIV+
Sbjct: 227 INGFIVK 233



 Score = 33.9 bits (74), Expect = 0.064
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +3

Query: 399 GLDTPKINGKFXLRAXXTGMILLDEVXIPEENLLPNV 509
           GL   KI  K  LR    G ILL  V +P+E+ LP V
Sbjct: 238 GLKATKIPNKIGLRMVQNGDILLQNVFVPDEDRLPGV 274


>At3g45300.1 68416.m04891 isovaleryl-CoA-dehydrogenase (IVD)
           identical to isovaleryl-CoA-dehydrogenase precursor
           [Arabidopsis thaliana] GI:5596622
          Length = 409

 Score = 85.8 bits (203), Expect = 1e-17
 Identities = 48/151 (31%), Positives = 80/151 (52%), Gaps = 4/151 (2%)
 Frame = +2

Query: 2   GCAGVSYVTYGLITRELDGVDSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGEL 181
           G  G+ Y+ + +   E+     S   +    S+L +  +   GT  QK+KYLP++ +GE 
Sbjct: 88  GGLGLGYLYHCIAMEEISRASGSVALSYGAHSNLCINQLVRNGTAAQKEKYLPKLISGEH 147

Query: 182 IGCFGLTEPNFGSDAGGLVTRAKHDAKNKCYVLSGSKTWITNAPIADIIIVWAKDD--AG 355
           +G   ++EPN GSD  G+  + K +  +  Y+L+G+K W TN P A+ ++V+AK D  AG
Sbjct: 148 VGALAMSEPNAGSDVVGM--KCKAEKVDGGYILNGNKMWCTNGPSAETLVVYAKTDTKAG 205

Query: 356 K--VRGFIVRTSRGKERFRYAQNQWEIXFAG 442
              +  FI+   +G   F  AQ   ++   G
Sbjct: 206 SKGITAFII--EKGMTGFSTAQKLDKLGMRG 234


>At5g65110.1 68418.m08191 acyl-CoA oxidase (ACX2) identical to
           acyl-CoA oxidase [Arabidopsis thaliana] GI:3044212
          Length = 692

 Score = 52.0 bits (119), Expect = 2e-07
 Identities = 34/101 (33%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
 Frame = +2

Query: 29  YGLITRELDGVDSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEP 208
           Y  I   +  VD S    M VQ SL  GS+   GT+  + KY   +   +  GCF +TE 
Sbjct: 129 YFAIMEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYFDGIDNLDYTGCFAMTEL 188

Query: 209 NFGSDAGGLVTRAKHDAKNKCYVL-----SGSKTWITNAPI 316
           + GS+  GL T A  D     +V+        K WI NA +
Sbjct: 189 HHGSNVQGLQTTATFDPLKDEFVIDTPNDGAIKWWIGNAAV 229


>At2g35690.1 68415.m04377 acyl-CoA oxidase, putative strong
           similarity to acyl-CoA oxidase [Arabidopsis thaliana]
           GI:3044214
          Length = 664

 Score = 44.8 bits (101), Expect = 3e-05
 Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
 Frame = +2

Query: 128 GTEDQKQKYLPRMATGELIGCFGLTEPNFGSDAGGLVTRAKHDAKNKCYVL-----SGSK 292
           GTE Q+QK+L      ++IGC+  TE   GS+  GL T A  D K   +++     + SK
Sbjct: 114 GTEQQQQKWLSLATKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDQFIIHSPTQTSSK 173

Query: 293 TW-------ITNAPIADIIIVWAKDDAGKVRGFIVR 379
            W        T+A I   +I   KD    V GFIV+
Sbjct: 174 WWPGGLGKVSTHAVIYARLITNGKDHG--VHGFIVQ 207


>At4g16760.1 68417.m02531 acyl-CoA oxidase (ACX1) identical to
           acyl-CoA oxidase [Arabidopsis thaliana] GI:3044214
          Length = 675

 Score = 41.5 bits (93), Expect = 3e-04
 Identities = 20/51 (39%), Positives = 30/51 (58%)
 Frame = +2

Query: 128 GTEDQKQKYLPRMATGELIGCFGLTEPNFGSDAGGLVTRAKHDAKNKCYVL 280
           GTE+Q++K+L      ++IGC+  TE   GS+  GL T A  D K   +V+
Sbjct: 114 GTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVI 164


>At1g06290.1 68414.m00665 acyl-CoA oxidase (ACX3) identical to
           acyl-CoA oxidase ACX3 [Arabidopsis thaliana] GI:8163758,
           GI:8515709
          Length = 675

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
 Frame = +2

Query: 47  ELDGV-DSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEPNFGSD 223
           E+ G+ D S    + V   L   ++  +GT+   +K+L       + GCF +TE   GS+
Sbjct: 137 EVCGIYDHSVSIKVGVHFFLWGNAVKFFGTKRHHEKWLKNTEDYVVKGCFAMTELGHGSN 196

Query: 224 AGGLVTRAKHDAKNKCYVL-----SGSKTWITNA 310
             G+ T   +D K + +V+     S  K WI  A
Sbjct: 197 VRGIETVTTYDPKTEEFVINTPCESAQKYWIGGA 230


>At3g06810.1 68416.m00808 acyl-CoA dehydrogenase-related low
           similarity to acyl-CoA dehydrogenase [Acinetobacter sp.
           NCIMB9871] GI:14587418; contains Pfam profiles PF01636:
           Phosphotransferase enzyme family, PF00441: Acyl-CoA
           dehydrogenase C-terminal domain, PF02770: Acyl-CoA
           dehydrogenase middle domain
          Length = 824

 Score = 37.5 bits (83), Expect = 0.005
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
 Frame = +2

Query: 107 MGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEPNF-GSDAGGLVTRAKHDAKNKCYVLS 283
           M  I  YG ++Q  ++L  +  G +   F +TEP    SDA  +    +    +  YV++
Sbjct: 527 MEVILRYGNKEQISEWLIPLLEGRIRSGFAMTEPQVASSDATNIECSIRRQGDS--YVIN 584

Query: 284 GSKTWITNA--PIADIIIVWAKDD 349
           G+K W + A  P   ++I+  K D
Sbjct: 585 GTKWWTSGAMDPRCRVLILMGKTD 608


>At1g06310.1 68414.m00667 acyl-CoA oxidase, putative strong
           similarity to acyl-CoA oxidase ACX3 GI:8163758 from
           [Arabidopsis thaliana]
          Length = 675

 Score = 36.3 bits (80), Expect = 0.012
 Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
 Frame = +2

Query: 47  ELDGV-DSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEPNFGSD 223
           E+ G+ D S  + + V   L   ++  +GT+   +K+L       + GCF +TE   G++
Sbjct: 137 EVCGIYDYSLSAKLGVHFLLWGNAVKFFGTKRHHEKWLKDTEDYVVKGCFAMTELGHGTN 196

Query: 224 AGGLVTRAKHDAKNKCYVL-----SGSKTWITNA 310
             G+ T   +D   + +V+     S  K WI  A
Sbjct: 197 VRGIETVTTYDPTTEEFVINTPCESAQKYWIGEA 230


>At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger)
           family protein similar to Pfam domain, PF00097: Zinc
           finger, C3HC4 type (RING finger)
          Length = 704

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
 Frame = +2

Query: 83  MSVQSSLAMGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEPNFGSDAG-GLVTRAKHDA 259
           +  ++S +  S+  YG         P  ++  +   FG TE  FGS  G  +   A H  
Sbjct: 225 VQTENSASHASLSQYGASSSLSLATPSQSSPNVTNHFGRTEQMFGSGGGRAVAASAFHST 284

Query: 260 KN 265
           +N
Sbjct: 285 RN 286


>At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger)
           family protein similar to Pfam domain, PF00097: Zinc
           finger, C3HC4 type (RING finger)
          Length = 704

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
 Frame = +2

Query: 83  MSVQSSLAMGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEPNFGSDAG-GLVTRAKHDA 259
           +  ++S +  S+  YG         P  ++  +   FG TE  FGS  G  +   A H  
Sbjct: 225 VQTENSASHASLSQYGASSSLSLATPSQSSPNVTNHFGRTEQMFGSGGGRAVAASAFHST 284

Query: 260 KN 265
           +N
Sbjct: 285 RN 286


>At1g70440.1 68414.m08104 hypothetical protein
          Length = 305

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = +2

Query: 134 EDQKQKYLPRMATGELIGCFGLTEPNFGSDAGGLVTRA--KHDAKNKCYVLSGSKTWITN 307
           E + Q+ +  +  GE+I       PNF  DA  L+  A  +H+    C+ LSG  ++ T 
Sbjct: 6   EIEDQESVTNLDNGEIINPISDNAPNFSGDATILLREATFEHNLIKNCF-LSGMGSFATE 64

Query: 308 APIADI 325
             I  +
Sbjct: 65  TTIVTV 70


>At1g74820.1 68414.m08668 cupin family protein similar to
           germin-like protein SP|P92995; contains Pfam profile
           PF00190: Cupin
          Length = 227

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -3

Query: 267 LFFASCFALVTNPPASLPKLGSVNPKQ 187
           +F A C  L TNP  SLP L  +NP Q
Sbjct: 16  IFLALCITLFTNPTLSLPAL-KLNPFQ 41


>At2g33580.1 68415.m04115 protein kinase family protein /
           peptidoglycan-binding LysM domain-containing protein
           protein kinase [Arabidopsis thaliana] GI:2852449;
           contains Pfam profiles PF01476: LysM domain, PF00069:
           Protein kinase domain
          Length = 664

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -3

Query: 180 NSPVAMRGKYFCFWSSVPYI*IEPIAKLLCTLIADL 73
           N P + R  Y  FWS  PY   + IAKLL    A++
Sbjct: 53  NGPPSCRS-YLTFWSQPPYNTADSIAKLLNVSAAEI 87


>At2g26900.1 68415.m03227 bile acid:sodium symporter family protein
           low similarity to SP|Q12908 Ileal sodium/bile acid
           cotransporter {Homo sapiens}; contains Pfam profile
           PF01758: Sodium Bile acid symporter family
          Length = 409

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -1

Query: 212 NWVPLTQNNQLIHL*PCVVSISVSGLQFRTYKSNPL 105
           +WVP T   Q     P +VS+S SG+  R   S P+
Sbjct: 22  SWVPSTTRTQTHLDFPKLVSVSNSGISLRIQNSKPI 57


>At5g55910.1 68418.m06972 protein kinase, putative contains protein
           kinase domain, Pfam:PF00069
          Length = 498

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = -2

Query: 400 PFFTSARSHYKTAYFTCVV--FCP 335
           PF  +  SH++T  F+C+V  FCP
Sbjct: 167 PFLPTLYSHFETEKFSCLVMEFCP 190


>At5g24750.1 68418.m02921 expressed protein
          Length = 520

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = -3

Query: 192 KQPINSPVAM-RGKYFCFWSSVPY 124
           KQP+++ +++  GK FCF   VPY
Sbjct: 369 KQPLHAGISIFNGKLFCFSGMVPY 392


>At4g26610.1 68417.m03835 protein kinase, putative similar to
           protein kinase G11A [Oryza sativa] SWISS-PROT:P47997
          Length = 506

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = -2

Query: 400 PFFTSARSHYKTAYFTCVV--FCP 335
           PF  +  SH++T  F+C+V  FCP
Sbjct: 181 PFLPTLYSHFETEKFSCLVMEFCP 204


>At2g04030.2 68415.m00372 heat shock protein, putative strong
           similarity to heat shock protein [Arabidopsis thaliana]
           GI:1906830; contains Pfam profiles PF02518: ATPase,
           histidine kinase-, DNA gyrase B-, and HSP90-like domain
           protein, PF00183: Hsp90 protein
          Length = 777

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 22/106 (20%), Positives = 41/106 (38%)
 Frame = +2

Query: 41  TRELDGVDSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEPNFGS 220
           T E  G    Y++ +S    L + S+Y +     ++         + +    +TEP+   
Sbjct: 71  TEEGSGEKFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLG 130

Query: 221 DAGGLVTRAKHDAKNKCYVLSGSKTWITNAPIADIIIVWAKDDAGK 358
           D G L  R K D  N    ++ +   +T   + D +   A+    K
Sbjct: 131 DGGDLEIRIKPDPDNGTITITDTGIGMTKEELIDCLGTIAQSGTSK 176


>At2g04030.1 68415.m00371 heat shock protein, putative strong
           similarity to heat shock protein [Arabidopsis thaliana]
           GI:1906830; contains Pfam profiles PF02518: ATPase,
           histidine kinase-, DNA gyrase B-, and HSP90-like domain
           protein, PF00183: Hsp90 protein
          Length = 780

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 22/106 (20%), Positives = 41/106 (38%)
 Frame = +2

Query: 41  TRELDGVDSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEPNFGS 220
           T E  G    Y++ +S    L + S+Y +     ++         + +    +TEP+   
Sbjct: 71  TEEGSGEKFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLG 130

Query: 221 DAGGLVTRAKHDAKNKCYVLSGSKTWITNAPIADIIIVWAKDDAGK 358
           D G L  R K D  N    ++ +   +T   + D +   A+    K
Sbjct: 131 DGGDLEIRIKPDPDNGTITITDTGIGMTKEELIDCLGTIAQSGTSK 176


>At5g64150.1 68418.m08055 methylase family protein contains TIGRfam
           TIGR00536: modification methylase, HemK family
          Length = 377

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
 Frame = +2

Query: 50  LDGVDSSYRSAMSVQSSLAMGSIYMYGTEDQKQK--YLPRMATGELIGCF 193
           +DG DS +         L  G  +++ T  +KQ    +  M T +L  CF
Sbjct: 307 IDGTDSLFHLCHGASRMLQPGGFFVFETNGEKQSKMIVDYMMTSDLKDCF 356


>At5g47750.1 68418.m05899 protein kinase, putative similar to
           protein kinase G11A [Oryza sativa] SWISS-PROT:P47997
          Length = 586

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -2

Query: 421 LILGVSKPFFTSARSHYKTAYFTCVV--FCP 335
           ++  +  PF  +  +H++T  F+C+V  FCP
Sbjct: 242 ILQSLDHPFLPTLYTHFETEKFSCLVMEFCP 272


>At3g45130.1 68416.m04871 cycloartenol synthase, putative /
           2,3-epoxysqualene--cycloartenol cyclase, putative /
           (S)-2,3-epoxysqualene mutase, putative 77% similar to
           cycloartenol synthase [SP|P38605|gi:452446] [PMID:
           7505443]; oxidosqualene cyclase  LcOSC2 - Luffa
           cylindrica, EMBL:AB033335
          Length = 748

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 5   CAGVSYVTYGLITRELDGVDSSYRSAMS 88
           C  +SYV   L+  ELDG D +  SA S
Sbjct: 176 CTVLSYVALRLMGEELDGGDGAMESARS 203


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,944,325
Number of Sequences: 28952
Number of extensions: 221608
Number of successful extensions: 541
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 917929344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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