Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_A09
(627 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 146 8e-36
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 144 3e-35
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 142 2e-34
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 60 2e-09
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 55 2e-09
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 59 2e-09
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 58 5e-09
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 57 1e-08
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 55 3e-08
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 55 3e-08
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 55 3e-08
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 54 8e-08
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 53 2e-07
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 52 3e-07
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 52 4e-07
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 52 4e-07
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 52 4e-07
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 52 4e-07
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 51 7e-07
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 50 1e-06
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 50 1e-06
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 50 1e-06
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 50 2e-06
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 50 2e-06
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 50 2e-06
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 49 2e-06
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 48 7e-06
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 48 7e-06
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 47 9e-06
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 47 9e-06
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 47 9e-06
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 46 2e-05
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 46 3e-05
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 46 3e-05
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 46 3e-05
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 45 4e-05
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 45 4e-05
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 45 4e-05
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 45 5e-05
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 44 6e-05
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 44 6e-05
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 44 6e-05
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 44 8e-05
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 44 8e-05
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 44 8e-05
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 44 8e-05
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 43 2e-04
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 43 2e-04
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 43 2e-04
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 42 3e-04
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 42 3e-04
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 42 4e-04
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 42 4e-04
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 42 4e-04
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 41 6e-04
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 41 6e-04
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 41 6e-04
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 41 8e-04
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 40 0.001
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 40 0.001
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 40 0.001
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 40 0.002
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 40 0.002
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 39 0.002
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 39 0.002
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 39 0.002
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 39 0.003
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 39 0.003
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 38 0.004
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 38 0.004
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 38 0.004
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 38 0.005
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 38 0.005
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 38 0.005
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 38 0.005
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 38 0.005
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 38 0.005
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 38 0.007
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 38 0.007
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 38 0.007
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 38 0.007
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 38 0.007
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 37 0.010
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 37 0.010
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 37 0.010
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 37 0.010
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 37 0.010
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 37 0.013
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 37 0.013
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 35 0.016
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 36 0.017
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 36 0.017
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 36 0.017
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 36 0.017
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 36 0.017
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 36 0.017
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 36 0.022
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 36 0.022
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 36 0.022
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 36 0.022
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 36 0.022
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 36 0.022
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 36 0.022
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 36 0.029
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 36 0.029
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 36 0.029
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 35 0.038
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 35 0.038
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 35 0.038
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 35 0.051
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 35 0.051
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 35 0.051
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 35 0.051
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 34 0.067
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 34 0.067
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 34 0.067
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 34 0.067
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 34 0.067
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 34 0.067
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 34 0.089
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 34 0.089
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 33 0.12
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 33 0.16
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 33 0.16
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 33 0.16
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 33 0.16
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 33 0.21
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 33 0.21
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 33 0.21
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 32 0.27
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 32 0.27
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 32 0.27
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 32 0.27
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 32 0.27
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 32 0.27
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 32 0.36
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 32 0.36
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 32 0.36
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 31 0.47
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 31 0.47
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 31 0.63
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 31 0.63
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 31 0.63
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 31 0.63
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 31 0.63
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 31 0.63
At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A... 31 0.63
At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A... 31 0.63
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 31 0.83
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 31 0.83
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 31 0.83
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 31 0.83
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 31 0.83
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 31 0.83
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 31 0.83
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 31 0.83
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 31 0.83
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 30 1.1
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 30 1.1
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 30 1.1
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 30 1.1
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 30 1.1
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 30 1.4
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 30 1.4
At2g35860.1 68415.m04403 beta-Ig-H3 domain-containing protein / ... 30 1.4
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 30 1.4
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 29 1.9
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 29 1.9
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 29 1.9
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 29 1.9
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 29 1.9
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 29 1.9
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 29 1.9
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 29 2.5
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 29 2.5
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 29 2.5
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 29 2.5
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 29 2.5
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 29 2.5
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 29 3.3
At2g43945.1 68415.m05462 expressed protein 29 3.3
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 29 3.3
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 29 3.3
At5g60050.1 68418.m07530 PRLI-interacting factor-related contain... 28 4.4
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 28 4.4
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 28 4.4
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 28 4.4
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 28 5.8
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 28 5.8
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 28 5.8
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 28 5.8
At4g03970.1 68417.m00561 Ulp1 protease family protein contains P... 27 7.7
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 27 7.7
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 27 7.7
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 27 7.7
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 27 7.7
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 27 7.7
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 27 7.7
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 146 bits (355), Expect = 8e-36
Identities = 67/106 (63%), Positives = 83/106 (78%)
Frame = +2
Query: 41 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 220
M+E L L+GT+R H VT IAT D+I+S+SRDK++I+WKLT+D+ YG+ Q+RL
Sbjct: 1 MAEGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT 60
Query: 221 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
GHSHF+ DVVLSSDG +ALSGSWD LRLWDLAAG +TRRF HTK
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTK 106
Score = 57.6 bits (133), Expect = 6e-09
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +2
Query: 77 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 253
GH WV+ + +P I+S+S DKT+ VW L+ + + L GH+ ++S V +
Sbjct: 148 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL-----RSTLAGHTGYVSTVAV 202
Query: 254 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKV 361
S DG+ SG D + LWDLA GK E ++ +
Sbjct: 203 SPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVI 238
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/87 (25%), Positives = 42/87 (48%)
Frame = +2
Query: 56 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 235
KLR TL GH G+V+ +A +P + S +D +++W L + Y + ++
Sbjct: 185 KLRSTLAGHTGYVSTVAVSPD-GSLCASGGKDGVVLLWDLAEGKKLYSL-------EANS 236
Query: 236 ISDVVLSSDGNYALSGSWDKTLRLWDL 316
+ + S Y L + + +++WDL
Sbjct: 237 VIHALCFSPNRYWLCAATEHGIKIWDL 263
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/81 (29%), Positives = 38/81 (46%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
L GH+ +V + + LS S D L +W L G+ +R GH+ + V
Sbjct: 59 LTGHSHFVEDVVLSSD-GQFALSGSWDGELRLWDLAA-----GVSTRRFVGHTKDVLSVA 112
Query: 251 LSSDGNYALSGSWDKTLRLWD 313
S D +S S D+T++LW+
Sbjct: 113 FSLDNRQIVSASRDRTIKLWN 133
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 144 bits (350), Expect = 3e-35
Identities = 65/106 (61%), Positives = 83/106 (78%)
Frame = +2
Query: 41 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 220
M+E L L+G +R H VT IAT D+I+++SRDK++I+WKLT+D+ +YG+ Q+RL
Sbjct: 1 MAEGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLT 60
Query: 221 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
GHSHF+ DVVLSSDG +ALSGSWD LRLWDLA G+TTRRF HTK
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTK 106
Score = 56.4 bits (130), Expect = 1e-08
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +2
Query: 77 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 253
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNSLVGHSGYLNTVAV 201
Query: 254 SSDGNYALSGSWDKTLRLWDLAAGK 328
S DG+ SG D + LWDLA GK
Sbjct: 202 SPDGSLCASGGKDGVILLWDLAEGK 226
Score = 41.1 bits (92), Expect = 6e-04
Identities = 23/90 (25%), Positives = 44/90 (48%)
Frame = +2
Query: 47 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 226
+ KLR +L GH+G++ +A +P + S +D +++W L + Y + + H
Sbjct: 181 QNCKLRNSLVGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSLEAGSII-H 238
Query: 227 SHFISDVVLSSDGNYALSGSWDKTLRLWDL 316
S + S Y L + + ++R+WDL
Sbjct: 239 S------LCFSPNRYWLCAATENSIRIWDL 262
Score = 40.7 bits (91), Expect = 8e-04
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 131 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYA--LSGSWDKTLR 304
I+S+SRD+T+ +W T E Y I + GH ++S V S + +S SWDKT++
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEGD--GHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 305 LWDLAAGKTTRRFEDHT 355
+W+L K H+
Sbjct: 177 VWNLQNCKLRNSLVGHS 193
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/81 (29%), Positives = 38/81 (46%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
L GH+ +V + + LS S D L +W L E +R GH+ + V
Sbjct: 59 LTGHSHFVEDVVLSSD-GQFALSGSWDGELRLWDLATGETT-----RRFVGHTKDVLSVA 112
Query: 251 LSSDGNYALSGSWDKTLRLWD 313
S+D +S S D+T++LW+
Sbjct: 113 FSTDNRQIVSASRDRTIKLWN 133
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 142 bits (344), Expect = 2e-34
Identities = 63/106 (59%), Positives = 83/106 (78%)
Frame = +2
Query: 41 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 220
M+E L L+GT+ H VT IAT D+I++SSRDK++I+WKLT+++ +YG+ Q+R+
Sbjct: 1 MAEGLVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMT 60
Query: 221 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
GHSHF+ DVVLSSDG +ALSGSWD LRLWDLA G++TRRF HTK
Sbjct: 61 GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTK 106
Score = 56.0 bits (129), Expect = 2e-08
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +2
Query: 77 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 253
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNTLAGHSGYLNTVAV 201
Query: 254 SSDGNYALSGSWDKTLRLWDLAAGK 328
S DG+ SG D + LWDLA GK
Sbjct: 202 SPDGSLCASGGKDGVILLWDLAEGK 226
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/90 (26%), Positives = 44/90 (48%)
Frame = +2
Query: 47 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 226
+ KLR TL GH+G++ +A +P + S +D +++W L + Y + + H
Sbjct: 181 QNCKLRNTLAGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSLEAGSII-H 238
Query: 227 SHFISDVVLSSDGNYALSGSWDKTLRLWDL 316
S + S Y L + + ++R+WDL
Sbjct: 239 S------LCFSPNRYWLCAATENSIRIWDL 262
Score = 41.5 bits (93), Expect = 4e-04
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 131 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYA--LSGSWDKTLR 304
I+S+SRD+T+ +W T E Y I + GH ++S V S + +S SWDKT++
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEAD--GHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 305 LWDLAAGKTTRRFEDHT 355
+W+L K H+
Sbjct: 177 VWNLQNCKLRNTLAGHS 193
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/81 (28%), Positives = 39/81 (48%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
+ GH+ +V + + LS S D L +W L E+ +R GH+ + V
Sbjct: 59 MTGHSHFVQDVVLSSD-GQFALSGSWDGELRLWDLATGEST-----RRFVGHTKDVLSVA 112
Query: 251 LSSDGNYALSGSWDKTLRLWD 313
S+D +S S D+T++LW+
Sbjct: 113 FSTDNRQIVSASRDRTIKLWN 133
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/96 (33%), Positives = 49/96 (51%)
Frame = +2
Query: 68 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 247
TL HN V+ + + ++ S+S DKT+ + + + P + GH + ISDV
Sbjct: 19 TLTSHNRAVSSVKFSSD-GRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 248 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
SSD + +S S DKTL+LWD+ G + HT
Sbjct: 78 AFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHT 113
Score = 51.2 bits (117), Expect = 5e-07
Identities = 29/93 (31%), Positives = 49/93 (52%)
Frame = +2
Query: 77 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 256
GH ++ +A + I+S+S DKTL +W + G K L GH+++ V +
Sbjct: 69 GHENGISDVAFSSD-ARFIVSASDDKTLKLWDVET-----GSLIKTLIGHTNYAFCVNFN 122
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
N +SGS+D+T+R+WD+ GK + H+
Sbjct: 123 PQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHS 155
Score = 37.9 bits (84), Expect = 0.005
Identities = 28/101 (27%), Positives = 47/101 (46%)
Frame = +2
Query: 50 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 229
T K L H+ VT + N + +I+SSS D +W D + + +
Sbjct: 144 TGKCLKVLPAHSDPVTAVDFN-RDGSLIVSSSYDGLCRIW----DSGTGHCVKTLIDDEN 198
Query: 230 HFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
+S V S +G + L G+ D TLRLW++++ K + + H
Sbjct: 199 PPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGH 239
Score = 37.5 bits (83), Expect = 0.007
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = +2
Query: 131 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 310
I+S S D + +W+L N+ + QK L GH+ + +V N SGS DKT+R+W
Sbjct: 258 IVSGSEDNCVHMWEL----NSKKLLQK-LEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 33.9 bits (74), Expect = 0.089
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +2
Query: 131 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH---SHFISDVVLSSDGNYALSGSWDKTL 301
IL + D TL +W ++ + K GH + IS ++G +SGS D +
Sbjct: 213 ILVGTLDNTLRLWNISSAKF-----LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCV 267
Query: 302 RLWDLAAGKTTRRFEDHTKV*QN 370
+W+L + K ++ E HT+ N
Sbjct: 268 HMWELNSKKLLQKLEGHTETVMN 290
Score = 30.7 bits (66), Expect = 0.83
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 200 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 316
+ + L H+ +S V SSDG S S DKT+R + +
Sbjct: 15 VHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTI 53
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 54.8 bits (126), Expect(2) = 2e-09
Identities = 26/77 (33%), Positives = 43/77 (55%)
Frame = +2
Query: 122 PDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 301
P+ ++S S D T+ +W+ + + P+KRL GH ++ V S DG + S S+DK++
Sbjct: 329 PERLVSGSDDFTMFLWEPSVSKQ----PKKRLTGHQQLVNHVYFSPDGKWIASASFDKSV 384
Query: 302 RLWDLAAGKTTRRFEDH 352
RLW+ G+ F H
Sbjct: 385 RLWNGITGQFVTVFRGH 401
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/79 (32%), Positives = 42/79 (53%)
Frame = +2
Query: 74 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 253
RGH G V Q++ + ++LS S+D TL +W++ + +P GH+ + V
Sbjct: 399 RGHVGPVYQVSWSAD-SRLLLSGSKDSTLKIWEIRTKKLKQDLP-----GHADEVFAVDW 452
Query: 254 SSDGNYALSGSWDKTLRLW 310
S DG +SG D+ L+LW
Sbjct: 453 SPDGEKVVSGGKDRVLKLW 471
Score = 36.7 bits (81), Expect = 0.013
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Frame = +2
Query: 68 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 247
T +GH WV +A +P ++ S S+ + W + E G P L GH +I+ +
Sbjct: 146 TCKGHKNWVLTVAWSPDGKHLV-SGSKSGEICCWNPKKGELE-GSP---LTGHKKWITGI 200
Query: 248 V-----LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
LSS ++ S D R+WD+ K+ HT
Sbjct: 201 SWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHT 241
Score = 35.5 bits (78), Expect = 0.029
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +2
Query: 221 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 316
GH+ + V S DG SGS D T+RLWDL
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDL 138
Score = 34.7 bits (76), Expect = 0.051
Identities = 27/94 (28%), Positives = 40/94 (42%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
L GH V + +P I S+S DK++ +W G GH + V
Sbjct: 356 LTGHQQLVNHVYFSPD-GKWIASASFDKSVRLWN-----GITGQFVTVFRGHVGPVYQVS 409
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
S+D LSGS D TL++W++ K + H
Sbjct: 410 WSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGH 443
Score = 32.3 bits (70), Expect = 0.27
Identities = 23/87 (26%), Positives = 39/87 (44%)
Frame = +2
Query: 68 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 247
T+ GH V ++ +P + S S D T+ +W L + P GH +++ V
Sbjct: 104 TIAGHAEAVLCVSFSPD-GKQLASGSGDTTVRLWDLYTET-----PLFTCKGHKNWVLTV 157
Query: 248 VLSSDGNYALSGSWDKTLRLWDLAAGK 328
S DG + +SGS + W+ G+
Sbjct: 158 AWSPDGKHLVSGSKSGEICCWNPKKGE 184
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +2
Query: 128 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYAL-SGSWDKTLR 304
+I + S+D T+ +W+ T+ G + L GH H+I+ + LS++ Y L +G++D T R
Sbjct: 254 IIYTGSQDCTIKMWETTQ-----GKLIRELKGHGHWINSLALSTE--YVLRTGAFDHTGR 306
Score = 24.6 bits (51), Expect(2) = 2e-09
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 38 KMSETL--KLRGTLRGHNGWVTQIATNPKY 121
KM ET KL L+GH W+ +A + +Y
Sbjct: 265 KMWETTQGKLIRELKGHGHWINSLALSTEY 294
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 59.3 bits (137), Expect = 2e-09
Identities = 32/95 (33%), Positives = 52/95 (54%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
L GH V + NP +I S S D+ + +W++ D N+ + L GH + I D+
Sbjct: 49 LSGHPSAVYTMKFNPA-GTLIASGSHDREIFLWRVHGDCKNFMV----LKGHKNAILDLH 103
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
+SDG+ +S S DKT+R WD+ GK ++ +H+
Sbjct: 104 WTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHS 138
Score = 41.9 bits (94), Expect = 3e-04
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Frame = +2
Query: 68 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 247
TL GH +T ++ +P +L++ D L VW + R K GH H
Sbjct: 217 TLEGHQDTITGMSLSPD-GSYLLTNGMDNKLCVWDM-RPYAPQNRCVKIFEGHQHNFEKN 274
Query: 248 VL----SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
+L S DG +GS D+ + +WD + +T + HT
Sbjct: 275 LLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHT 314
Score = 38.7 bits (86), Expect = 0.003
Identities = 26/102 (25%), Positives = 43/102 (42%)
Frame = +2
Query: 47 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 226
ET K + H+ +V + P +I+S S D T +W + + P K
Sbjct: 126 ETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDK----- 180
Query: 227 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
+ I+ V S + +G D +++WDL G+ T E H
Sbjct: 181 -YQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGH 221
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +2
Query: 125 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 304
D I + D + VW L + E L GH I+ + LS DG+Y L+ D L
Sbjct: 193 DKIFTGGVDNDVKVWDLRKGEATM-----TLEGHQDTITGMSLSPDGSYLLTNGMDNKLC 247
Query: 305 LWDL 316
+WD+
Sbjct: 248 VWDM 251
Score = 35.1 bits (77), Expect = 0.038
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
L+GH + + I+S+S DKT+ W + G K++ HS F++
Sbjct: 92 LKGHKNAILDLHWTSD-GSQIVSASPDKTVRAWDVET-----GKQIKKMAEHSSFVNSCC 145
Query: 251 LSSDGN-YALSGSWDKTLRLWDLAAGKTTRRFEDHTKV 361
+ G +SGS D T +LWD+ + F D ++
Sbjct: 146 PTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQI 183
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 58.0 bits (134), Expect = 5e-09
Identities = 31/96 (32%), Positives = 53/96 (55%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
L+ HNG + + +P + +SS DKT+ +W + + + + +K L GH ++ D V
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASS-DKTVKIWNV----DGFKL-EKVLTGHQRWVWDCV 260
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
S DG + ++ S D T RLW + AGK + ++ H K
Sbjct: 261 FSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHK 296
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +2
Query: 128 MILSSSRDKTLIVWKLTRDENNYGI--PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 301
M+++++ T VW+L R + P +L H+ I +LS Y + S DKT+
Sbjct: 176 MVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTV 235
Query: 302 RLWDLAAGKTTRRFEDHTK 358
++W++ K + H +
Sbjct: 236 KIWNVDGFKLEKVLTGHQR 254
Score = 30.7 bits (66), Expect = 0.83
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 224 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 346
H++ + V D + SGS D T+++WDL A + +E
Sbjct: 77 HTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYE 117
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 56.8 bits (131), Expect = 1e-08
Identities = 37/103 (35%), Positives = 55/103 (53%)
Frame = +2
Query: 5 SGXSSLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRD 184
SG ++KP+ + TL GH ++ + + +++ S+S DKT+I+W T
Sbjct: 24 SGNVPIYKPYRHLK-------TLEGHTAAISCVKFSND-GNLLASASVDKTMILWSAT-- 73
Query: 185 ENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 313
NY + R GHS ISD+ SSD +Y S S D TLR+WD
Sbjct: 74 --NYSLIH-RYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWD 113
Score = 48.0 bits (109), Expect = 5e-06
Identities = 28/93 (30%), Positives = 49/93 (52%)
Frame = +2
Query: 77 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 256
GH+ ++ +A + S+S D TL +W D + K L GH++F+ V +
Sbjct: 83 GHSSGISDLAWSSD-SHYTCSASDDCTLRIW----DARSPYECLKVLRGHTNFVFCVNFN 137
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
N +SGS+D+T+R+W++ GK R + H+
Sbjct: 138 PPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHS 170
Score = 45.2 bits (102), Expect = 4e-05
Identities = 28/93 (30%), Positives = 47/93 (50%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
LRGH +V + NP ++I+S S D+T+ +W++ G + + HS IS V
Sbjct: 124 LRGHTNFVFCVNFNPP-SNLIVSGSFDETIRIWEVKT-----GKCVRMIKAHSMPISSVH 177
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED 349
+ DG+ +S S D + ++WD G + D
Sbjct: 178 FNRDGSLIVSASHDGSCKIWDAKEGTCLKTLID 210
Score = 41.1 bits (92), Expect = 6e-04
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = +2
Query: 209 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
K L GH+ IS V S+DGN S S DKT+ LW R+E H+
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHS 85
Score = 35.1 bits (77), Expect = 0.038
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
++G Y +SGS D + LWDL A +R E HT
Sbjct: 268 TNGKYIVSGSEDNCVYLWDLQARNILQRLEGHT 300
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 55.2 bits (127), Expect = 3e-08
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Frame = +2
Query: 50 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 229
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 204
Query: 230 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDH 352
+ V +S S+ N+ +SGS D T RLWD AA + R F H
Sbjct: 205 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGH 247
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/92 (27%), Positives = 42/92 (45%)
Frame = +2
Query: 77 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 256
GH V ++ + P+ +S S D T +W TR + + +GH ++ V
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWD-TRAASR---AVRTFHGHEGDVNTVKFF 257
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
DG +GS D T RL+D+ G + ++ H
Sbjct: 258 PDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPH 289
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 55.2 bits (127), Expect = 3e-08
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Frame = +2
Query: 50 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 229
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 83 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 142
Query: 230 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDH 352
+ V +S S+ N+ +SGS D T RLWD AA + R F H
Sbjct: 143 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGH 185
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +2
Query: 77 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--NYGIPQKRLYGHSHFISDVV 250
G NG VT IA + + + + T VW E + G+ Q H + IS +
Sbjct: 230 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQD---SHRNRISCLG 286
Query: 251 LSSDGNYALSGSWDKTLRLW 310
LS+DG+ +GSWD L++W
Sbjct: 287 LSADGSALCTGSWDSNLKIW 306
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/92 (27%), Positives = 42/92 (45%)
Frame = +2
Query: 77 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 256
GH V ++ + P+ +S S D T +W TR + + +GH ++ V
Sbjct: 140 GHTADVLSVSISGSNPNWFISGSCDSTARLWD-TRAASR---AVRTFHGHEGDVNTVKFF 195
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
DG +GS D T RL+D+ G + ++ H
Sbjct: 196 PDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPH 227
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 55.2 bits (127), Expect = 3e-08
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Frame = +2
Query: 50 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 229
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 204
Query: 230 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDH 352
+ V +S S+ N+ +SGS D T RLWD AA + R F H
Sbjct: 205 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGH 247
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +2
Query: 77 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--NYGIPQKRLYGHSHFISDVV 250
G NG VT IA + + + + T VW E + G+ Q H + IS +
Sbjct: 292 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQD---SHRNRISCLG 348
Query: 251 LSSDGNYALSGSWDKTLRLW 310
LS+DG+ +GSWD L++W
Sbjct: 349 LSADGSALCTGSWDSNLKIW 368
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/92 (27%), Positives = 42/92 (45%)
Frame = +2
Query: 77 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 256
GH V ++ + P+ +S S D T +W TR + + +GH ++ V
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWD-TRAASR---AVRTFHGHEGDVNTVKFF 257
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
DG +GS D T RL+D+ G + ++ H
Sbjct: 258 PDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPH 289
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 54.0 bits (124), Expect = 8e-08
Identities = 31/96 (32%), Positives = 50/96 (52%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
L+ HN + + +P + +SS DKT+ +W L + + + +K L GH ++ D
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASS-DKTVKIWNL----DGFKL-EKVLTGHERWVWDCD 266
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
S DG Y ++ S D T RLW + AGK ++ H K
Sbjct: 267 FSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRK 302
Score = 34.7 bits (76), Expect = 0.051
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +2
Query: 128 MILSSSRDKTLIVWK--LTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 301
M+++++ T VW+ R P +L H+ I +LS Y + S DKT+
Sbjct: 182 MVVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTV 241
Query: 302 RLWDLAAGKTTRRFEDHTK 358
++W+L K + H +
Sbjct: 242 KIWNLDGFKLEKVLTGHER 260
Score = 31.5 bits (68), Expect = 0.47
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 191 NYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKV 361
N IP + H+ + V G+ SGS D ++++WDL + R F + V
Sbjct: 72 NPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVSPV 128
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 52.8 bits (121), Expect = 2e-07
Identities = 32/102 (31%), Positives = 47/102 (46%)
Frame = +2
Query: 47 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 226
E K+ GH + + +P + + + S S D L VW D G Q GH
Sbjct: 37 EESKMVRAFTGHRSNCSAVEFHP-FGEFLASGSSDTNLRVW----DTRKKGCIQT-YKGH 90
Query: 227 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
+ IS + S DG + +SG D +++WDL AGK F+ H
Sbjct: 91 TRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCH 132
Score = 34.3 bits (75), Expect = 0.067
Identities = 24/97 (24%), Positives = 41/97 (42%)
Frame = +2
Query: 68 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 247
+L GH V +A N + ++L+ + + +W L + + GH S V
Sbjct: 2 SLCGHTSPVDSVAFNSEEV-LVLAGASSGVIKLWDLEESKM-----VRAFTGHRSNCSAV 55
Query: 248 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
G + SGS D LR+WD + ++ HT+
Sbjct: 56 EFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTR 92
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 52.0 bits (119), Expect = 3e-07
Identities = 28/96 (29%), Positives = 46/96 (47%)
Frame = +2
Query: 56 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 235
+L T GH V+ I PK ++LS+ D + +W D N G + GH+
Sbjct: 273 RLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIW----DVYNSGKCMRTYMGHAKA 328
Query: 236 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF 343
+ D+ S+DG+ L+ +DK ++ WD G+ F
Sbjct: 329 VRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTF 364
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +2
Query: 80 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH--SHFISDVVL 253
H + I+ +P + + + S D ++++ TR+ +KR GH + + V
Sbjct: 454 HMHSMPSISVHPN-GNWLAAQSLDNQILIYS-TRERFQLN-KKKRFAGHIVAGYACQVNF 510
Query: 254 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKV 361
S DG + +SG + WD + K R + H V
Sbjct: 511 SPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGV 546
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 51.6 bits (118), Expect = 4e-07
Identities = 26/94 (27%), Positives = 45/94 (47%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
++GH GWV +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 172 IQGHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIEQVRGLA 225
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
+S+ Y S DK ++ WDL K R + H
Sbjct: 226 VSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGH 259
Score = 44.4 bits (100), Expect = 6e-05
Identities = 29/104 (27%), Positives = 44/104 (42%)
Frame = +2
Query: 47 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 226
E K+ + GH V +A +P D++L+ RD VW + + L GH
Sbjct: 248 EQNKVIRSYHGHLSGVYCLALHPTL-DVLLTGGRDSVCRVWDIRTKMQIFA-----LSGH 301
Query: 227 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
+ + V ++GS D T++ WDL GKT H K
Sbjct: 302 DNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKK 345
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 51.6 bits (118), Expect = 4e-07
Identities = 27/94 (28%), Positives = 45/94 (47%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
L+GH GWV +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 166 LQGHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIGQVRGLA 219
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
+S+ Y S DK ++ WDL K R + H
Sbjct: 220 VSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGH 253
Score = 41.5 bits (93), Expect = 4e-04
Identities = 27/104 (25%), Positives = 45/104 (43%)
Frame = +2
Query: 47 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 226
E K+ + GH V +A +P D++L+ RD VW + + +P H
Sbjct: 242 EQNKVIRSYHGHLHGVYCLALHPTL-DVVLTGGRDSVCRVWDIRTKMQIFVLP------H 294
Query: 227 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
+ V+ ++GS D T++ WDL GK+ +H K
Sbjct: 295 DSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKK 338
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 51.6 bits (118), Expect = 4e-07
Identities = 28/93 (30%), Positives = 45/93 (48%)
Frame = +2
Query: 77 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 256
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ + L G + D
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHLKGVN--CVDYFTG 196
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
D Y ++GS D T ++WD + E HT
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
Score = 43.2 bits (97), Expect = 1e-04
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +2
Query: 80 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS- 256
H ++ +A +P P +LSSS D + +W D + + GHSH++ V +
Sbjct: 98 HADYIRCVAVHPTLP-YVLSSSDDMLIKLW----DWEKGWLCTQIFEGHSHYVMQVTFNP 152
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
D N S S D+T+++W+L + + H K
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLK 186
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 131 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 310
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 51.6 bits (118), Expect = 4e-07
Identities = 30/102 (29%), Positives = 48/102 (47%)
Frame = +2
Query: 47 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 226
E K+ GH + + +P + + + S S D L +W + + G Q GH
Sbjct: 88 EEAKMVRAFTGHRSNCSAVEFHP-FGEFLASGSSDANLKIWDIRKK----GCIQT-YKGH 141
Query: 227 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
S IS + + DG + +SG D +++WDL AGK F+ H
Sbjct: 142 SRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFH 183
Score = 31.5 bits (68), Expect = 0.47
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 215 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
L GH+ + V S L+G+ ++LWD+ K R F H
Sbjct: 54 LCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGH 99
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 221 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
GH S V G + SGS D L++WD+ + ++ H++
Sbjct: 98 GHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSR 143
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 50.8 bits (116), Expect = 7e-07
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = +2
Query: 77 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 250
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
D Y ++GS D T ++WD + E HT
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
Score = 44.8 bits (101), Expect = 5e-05
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +2
Query: 80 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS- 256
H+ ++ +A +P P +LSSS D + +W E + Q GHSH++ V +
Sbjct: 98 HSDYIRCVAVHPTLP-YVLSSSDDMLIKLWDW---EKGWACTQI-FEGHSHYVMQVTFNP 152
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
D N S S D+T+++W+L + + H K
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 131 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 310
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 50.0 bits (114), Expect = 1e-06
Identities = 32/93 (34%), Positives = 47/93 (50%)
Frame = +2
Query: 74 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 253
+GHN V +P + S S D+T +W + R + P + + GH +SDV
Sbjct: 457 KGHNYPVWDAQFSP-FGHYFASCSHDRTARIWSMDRIQ-----PLRIMAGH---LSDVDW 507
Query: 254 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
+ NY +GS DKT+RLWD+ G+ R F H
Sbjct: 508 HPNCNYIATGSSDKTVRLWDVQTGECVRIFIGH 540
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
L GH+G V +P D +LSSS D T+ +W + N + K GH++ + D
Sbjct: 414 LLGHSGPVYSATFSPP-GDFVLSSSADTTIRLWSTKLNANL--VCYK---GHNYPVWDAQ 467
Query: 251 LSSDGNYALSGSWDKTLRLWDL 316
S G+Y S S D+T R+W +
Sbjct: 468 FSPFGHYFASCSHDRTARIWSM 489
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
LR G ++ + +P + I + S DKT+ +W + E + GH + +
Sbjct: 495 LRIMAGHLSDVDWHPNC-NYIATGSSDKTVRLWDVQTGEC-----VRIFIGHRSMVLSLA 548
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAGK 328
+S DG Y SG D T+ +WDL+ +
Sbjct: 549 MSPDGRYMASGDEDGTIMMWDLSTAR 574
Score = 38.3 bits (85), Expect = 0.004
Identities = 25/91 (27%), Positives = 42/91 (46%)
Frame = +2
Query: 77 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 256
GH V +A +P M S D T+++W L+ L GH+ + + S
Sbjct: 539 GHRSMVLSLAMSPDGRYMA-SGDEDGTIMMWDLSTARCI-----TPLMGHNSCVWSLSYS 592
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFED 349
+G+ SGS D T++LWD+ + + E+
Sbjct: 593 GEGSLLASGSADCTVKLWDVTSSTKLTKAEE 623
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 50.0 bits (114), Expect = 1e-06
Identities = 30/94 (31%), Positives = 45/94 (47%)
Frame = +2
Query: 74 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 253
+GH V +A N M++S +K L VW + G +L GH+ + ++L
Sbjct: 210 KGHKESVYALAMNDT-GTMLVSGGTEKVLRVW-----DPRTGSKSMKLRGHTDNVRVLLL 263
Query: 254 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
S G + LSGS D +RLWDL + + HT
Sbjct: 264 DSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHT 297
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 50.0 bits (114), Expect = 1e-06
Identities = 30/94 (31%), Positives = 45/94 (47%)
Frame = +2
Query: 74 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 253
+GH V +A N M++S +K L VW + G +L GH+ + ++L
Sbjct: 210 KGHKESVYALAMNDT-GTMLVSGGTEKVLRVW-----DPRTGSKSMKLRGHTDNVRVLLL 263
Query: 254 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
S G + LSGS D +RLWDL + + HT
Sbjct: 264 DSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHT 297
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = +2
Query: 77 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 250
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
D Y ++GS D T ++WD + + HT
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHT 229
Score = 48.8 bits (111), Expect = 3e-06
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +2
Query: 80 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS- 256
H+ ++ +A +P P +LSSS D + +W EN + Q GHSH++ VV +
Sbjct: 98 HSDYIRCVAVHPTLP-YVLSSSDDMLIKLWDW---ENGWACTQI-FEGHSHYVMQVVFNP 152
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
D N S S D+T+++W+L + + H K
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 131 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 310
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = +2
Query: 77 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 250
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
D Y ++GS D T ++WD + + HT
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHT 229
Score = 48.8 bits (111), Expect = 3e-06
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +2
Query: 80 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS- 256
H+ ++ +A +P P +LSSS D + +W EN + Q GHSH++ VV +
Sbjct: 98 HSDYIRCVAVHPTLP-YVLSSSDDMLIKLWDW---ENGWACTQI-FEGHSHYVMQVVFNP 152
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
D N S S D+T+++W+L + + H K
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 131 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 310
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = +2
Query: 77 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 250
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
D Y ++GS D T ++WD + + HT
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHT 229
Score = 48.8 bits (111), Expect = 3e-06
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +2
Query: 80 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS- 256
H+ ++ +A +P P +LSSS D + +W EN + Q GHSH++ VV +
Sbjct: 98 HSDYIRCVAVHPTLP-YVLSSSDDMLIKLWDW---ENGWACTQI-FEGHSHYVMQVVFNP 152
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
D N S S D+T+++W+L + + H K
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 131 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 310
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/79 (35%), Positives = 41/79 (51%)
Frame = +2
Query: 80 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 259
H G VT + N K M+ S S+D +I+W + + + RL GH ++D+V
Sbjct: 105 HKGAVTALRYN-KVGSMLASGSKDNDIILWDVVGESGLF-----RLRGHRDQVTDLVFLD 158
Query: 260 DGNYALSGSWDKTLRLWDL 316
G +S S DK LR+WDL
Sbjct: 159 GGKKLVSSSKDKFLRVWDL 177
Score = 37.1 bits (82), Expect = 0.010
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 215 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG 325
LYGH + + +SSDG ++GS DK L++W L G
Sbjct: 578 LYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFG 614
Score = 33.5 bits (73), Expect = 0.12
Identities = 23/89 (25%), Positives = 43/89 (48%)
Frame = +2
Query: 47 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 226
++LK +L GH V I + ++I++ S+DK L +W L ++G K ++ H
Sbjct: 570 DSLKFYLSLYGHKLPVMCIDISSD-GELIVTGSQDKNLKIWGL-----DFGDCHKSIFAH 623
Query: 227 SHFISDVVLSSDGNYALSGSWDKTLRLWD 313
+ V + +Y S D+ ++ WD
Sbjct: 624 GDSVMGVKFVRNTHYLFSIGKDRLVKYWD 652
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 215 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 313
L GH I + +S+ G++ ++GS D+++R WD
Sbjct: 662 LEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 47.6 bits (108), Expect = 7e-06
Identities = 27/102 (26%), Positives = 47/102 (46%)
Frame = +2
Query: 47 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 226
E K+ TL GH + +P + + S S D L +W + + + GH
Sbjct: 182 EEAKVVRTLTGHRSNCVSVNFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 235
Query: 227 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
+ ++ + + DG + +SG D +++WDL AGK F+ H
Sbjct: 236 TRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSH 277
Score = 36.3 bits (80), Expect = 0.017
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 215 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
LYGHS I V + +G+ T++LWDL K R H
Sbjct: 148 LYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGH 193
Score = 31.1 bits (67), Expect = 0.63
Identities = 20/97 (20%), Positives = 40/97 (41%)
Frame = +2
Query: 68 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 247
+L GH+ + + + ++ + + T+ +W L + + L GH V
Sbjct: 147 SLYGHSSGIDSVTFDAS-EGLVAAGAASGTIKLWDLEEAK-----VVRTLTGHRSNCVSV 200
Query: 248 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
G + SGS D L++WD+ ++ HT+
Sbjct: 201 NFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTR 237
Score = 28.3 bits (60), Expect = 4.4
Identities = 23/83 (27%), Positives = 31/83 (37%)
Frame = +2
Query: 68 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 247
T +GH V + P I+S D + VW LT G H I +
Sbjct: 231 TYKGHTRGVNVLRFTPD-GRWIVSGGEDNVVKVWDLTA-----GKLLHEFKSHEGKIQSL 284
Query: 248 VLSSDGNYALSGSWDKTLRLWDL 316
+GS DKT++ WDL
Sbjct: 285 DFHPHEFLLATGSADKTVKFWDL 307
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 47.6 bits (108), Expect = 7e-06
Identities = 24/77 (31%), Positives = 42/77 (54%)
Frame = +2
Query: 125 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 304
+M+ S S+D + +W++ G+ +R HS ++ + S DG+ LS S+D+T R
Sbjct: 276 EMLASGSQDGKIKIWRIRT-----GVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTAR 330
Query: 305 LWDLAAGKTTRRFEDHT 355
+ L +GK + F HT
Sbjct: 331 IHGLKSGKLLKEFRGHT 347
Score = 34.7 bits (76), Expect = 0.051
Identities = 21/78 (26%), Positives = 42/78 (53%)
Frame = +2
Query: 80 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 259
H+ VT ++ + + +LS+S D+T + L G K GH+ +++ + +S
Sbjct: 304 HSQGVTSLSFS-RDGSQLLSTSFDQTARIHGLKS-----GKLLKEFRGHTSYVNHAIFTS 357
Query: 260 DGNYALSGSWDKTLRLWD 313
DG+ ++ S D T+++WD
Sbjct: 358 DGSRIITASSDCTVKVWD 375
Score = 31.1 bits (67), Expect = 0.63
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = +2
Query: 131 ILSSSRDKTLIVW-----KLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDK 295
+ SSS D + VW KL +D Y + + H + + S D SGS D
Sbjct: 228 LASSSVDGFIEVWDYISGKLKKDLQ-YQADESFMM-HDDPVLCIDFSRDSEMLASGSQDG 285
Query: 296 TLRLWDLAAGKTTRRFEDHTK 358
+++W + G RRF+ H++
Sbjct: 286 KIKIWRIRTGVCIRRFDAHSQ 306
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 47.2 bits (107), Expect = 9e-06
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +2
Query: 74 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 253
RGH G + ++ + K +LSSS D+T+ +W++ + R++ H F++ V
Sbjct: 360 RGHTGEILDLSWSEK--GFLLSSSVDETVRLWRVGSSDECI-----RVFSHKSFVTCVAF 412
Query: 254 SS-DGNYALSGSWDKTLRLWDLA 319
+ D NY +SGS D +R+WD++
Sbjct: 413 NPVDDNYFISGSIDGKVRIWDVS 435
Score = 31.9 bits (69), Expect = 0.36
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 203 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
PQ GH+ I D+ S G + LS S D+T+RLW + + R H
Sbjct: 355 PQHEFRGHTGEILDLSWSEKG-FLLSSSVDETVRLWRVGSSDECIRVFSH 403
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 47.2 bits (107), Expect = 9e-06
Identities = 27/102 (26%), Positives = 47/102 (46%)
Frame = +2
Query: 47 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 226
E K+ TL GH + +P + + S S D L +W + + + GH
Sbjct: 89 EEAKIVRTLTGHRSNCISVDFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 142
Query: 227 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
+ ++ + + DG + +SG D +++WDL AGK F+ H
Sbjct: 143 TRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Score = 34.7 bits (76), Expect = 0.051
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 215 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
LYGHS I V + +G+ T++LWDL K R H
Sbjct: 55 LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGH 100
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +2
Query: 209 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
+ L GH V G + SGS D L++WD+ ++ HT+
Sbjct: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTR 144
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 47.2 bits (107), Expect = 9e-06
Identities = 27/102 (26%), Positives = 47/102 (46%)
Frame = +2
Query: 47 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 226
E K+ TL GH + +P + + S S D L +W + + + GH
Sbjct: 89 EEAKIVRTLTGHRSNCISVDFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 142
Query: 227 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
+ ++ + + DG + +SG D +++WDL AGK F+ H
Sbjct: 143 TRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Score = 34.7 bits (76), Expect = 0.051
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 215 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
LYGHS I V + +G+ T++LWDL K R H
Sbjct: 55 LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGH 100
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +2
Query: 209 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
+ L GH V G + SGS D L++WD+ ++ HT+
Sbjct: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTR 144
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +2
Query: 65 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 244
G + GH V+ +A NP Y I S+S D + +W ++ P GH +
Sbjct: 50 GAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFP-----GHQGAVRG 104
Query: 245 VVLSSDGNYALSGSWDKTLRLWDL 316
+ S+DGN +S D T+RLW++
Sbjct: 105 LTASTDGNVLVSCGTDCTVRLWNV 128
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 245 VVLSSDGNYALSGSWDKTLRLWDLAAGK 328
V S D Y +SGS D LRLW A +
Sbjct: 328 VKYSCDATYVISGSDDTNLRLWKAKASE 355
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 45.6 bits (103), Expect = 3e-05
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +2
Query: 74 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 253
+GH G + ++ + K +LSSS D+T+ +W++ DE R + H++F++ V
Sbjct: 319 KGHIGEILDLSWSEK--GYLLSSSVDETVRLWRVGCDEC------LRTFTHNNFVTCVAF 370
Query: 254 SS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKV 361
+ D NY +SGS D +R+WD+ T R D+T +
Sbjct: 371 NPVDDNYFISGSIDGKVRIWDV----TRCRVVDYTDI 403
Score = 31.9 bits (69), Expect = 0.36
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +2
Query: 134 LSSSRDKTLIVWKLTRDENNYGIPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLR 304
L S D T +V T + I +K L+ GH I D+ S G Y LS S D+T+R
Sbjct: 292 LRKSSDSTCVVLPPTI----FSISEKPLHEFKGHIGEILDLSWSEKG-YLLSSSVDETVR 346
Query: 305 LWDLAAGKTTRRF 343
LW + + R F
Sbjct: 347 LWRVGCDECLRTF 359
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 45.6 bits (103), Expect = 3e-05
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +2
Query: 74 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 253
+GH G + ++ + K +LSSS D+T+ +W++ DE R + H++F++ V
Sbjct: 319 KGHIGEILDLSWSEK--GYLLSSSVDETVRLWRVGCDEC------LRTFTHNNFVTCVAF 370
Query: 254 SS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKV 361
+ D NY +SGS D +R+WD+ T R D+T +
Sbjct: 371 NPVDDNYFISGSIDGKVRIWDV----TRCRVVDYTDI 403
Score = 31.9 bits (69), Expect = 0.36
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +2
Query: 134 LSSSRDKTLIVWKLTRDENNYGIPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLR 304
L S D T +V T + I +K L+ GH I D+ S G Y LS S D+T+R
Sbjct: 292 LRKSSDSTCVVLPPTI----FSISEKPLHEFKGHIGEILDLSWSEKG-YLLSSSVDETVR 346
Query: 305 LWDLAAGKTTRRF 343
LW + + R F
Sbjct: 347 LWRVGCDECLRTF 359
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 45.6 bits (103), Expect = 3e-05
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
Frame = +2
Query: 68 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 247
TL GH ++ + + +YP I+S+S D+T+ +W + + L GH+H++
Sbjct: 88 TLLGHLDYIRTVQFHHEYP-WIVSASDDQTIRIWNW-QSRTCVSV----LTGHNHYVMCA 141
Query: 248 VLSSDGNYALSGSWDKTLRLWDLAA--GKTTRRFEDHTKV*Q-NS*FC*GVNADYALKII 418
+ +S S D+T+R+WD+ A KT +D ++ Q NS GV+A +K +
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNSDLFGGVDA--IVKYV 199
Query: 419 LSAYAR 436
L + R
Sbjct: 200 LEGHDR 205
Score = 41.1 bits (92), Expect = 6e-04
Identities = 23/81 (28%), Positives = 43/81 (53%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
L GH+ V A +P P +I+S + D+ + +W++ + L GH + +S V+
Sbjct: 200 LEGHDRGVNWAAFHPTLP-LIVSGADDRQVKLWRMNETK---AWEVDTLRGHMNNVSSVM 255
Query: 251 LSSDGNYALSGSWDKTLRLWD 313
+ + +S S DK++R+WD
Sbjct: 256 FHAKQDIIVSNSEDKSIRVWD 276
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 38 KMSETLKLR-GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 181
+M+ET TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/101 (25%), Positives = 47/101 (46%)
Frame = +2
Query: 53 LKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSH 232
LK R + H+ + +A + ++ + S D+T +W+L + L GH
Sbjct: 489 LKTRSVVAAHDKDINSVAV-ARNDSLVCTGSEDRTASIWRLPDL-----VHVVTLKGHKR 542
Query: 233 FISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
I V S+ ++ S DKT+++W ++ G + FE HT
Sbjct: 543 RIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHT 583
Score = 44.8 bits (101), Expect = 5e-05
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = +2
Query: 47 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 226
ETLK + +GH G V +A + ++ ++ D+ ++VW + + G GH
Sbjct: 90 ETLKCIRSWKGHEGPVMGMACHAS-GGLLATAGADRKVLVWDV-----DGGFCTHYFRGH 143
Query: 227 SHFISDVVLSSDGN--YALSGSWDKTLRLWDLAAGKTTRR 340
+S ++ D N +SGS D T+R+WDL A T ++
Sbjct: 144 KGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKK 183
Score = 44.0 bits (99), Expect = 8e-05
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +2
Query: 74 RGHNGWVTQIATNP-KYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
RGH G V+ I +P ++++S S D T+ VW L +N + H ++ +
Sbjct: 141 RGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNA-KNTEKKCLAIMEKHFSAVTSIA 199
Query: 251 LSSDGNYALSGSWDKTLRLWDL 316
LS DG S DK + LWDL
Sbjct: 200 LSEDGLTLFSAGRDKVVNLWDL 221
Score = 38.7 bits (86), Expect = 0.003
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Frame = +2
Query: 65 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL--TRDENNYGIPQKR---LYGHS 229
G GHNG + +A K +S S D+TL VW L +++ I K + H
Sbjct: 440 GVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHD 499
Query: 230 HFISDVVLSSDGNYALSGSWDKTLRLWDL 316
I+ V ++ + + +GS D+T +W L
Sbjct: 500 KDINSVAVARNDSLVCTGSEDRTASIWRL 528
Score = 34.7 bits (76), Expect = 0.051
Identities = 21/95 (22%), Positives = 43/95 (45%)
Frame = +2
Query: 68 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 247
TL+GH + + + ++++S DKT+ +W ++ G K GH+ +
Sbjct: 536 TLKGHKRRIFSVEFST-VDQCVMTASGDKTVKIWAISD-----GSCLKTFEGHTSSVLRA 589
Query: 248 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
+DG +S D L+LW++ + ++ H
Sbjct: 590 SFITDGTQFVSCGADGLLKLWNVNTSECIATYDQH 624
Score = 33.9 bits (74), Expect = 0.089
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Frame = +2
Query: 50 TLKLRGTLRGHNGWVTQIAT--NPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 223
T+ L GH V + T + +I++ S+DKT+ +W T ++ G+ G
Sbjct: 390 TMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNAT-SKSCIGVGT----G 444
Query: 224 HSHFISDVVLSSDG-NYALSGSWDKTLRLWDL 316
H+ I V + ++ +SGS D+TL++W L
Sbjct: 445 HNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL 476
Score = 31.1 bits (67), Expect = 0.63
Identities = 22/101 (21%), Positives = 43/101 (42%)
Frame = +2
Query: 59 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFI 238
++ T+ G + +T +A +P ++ S+ + + VW L E I + GH +
Sbjct: 52 VKSTIEGESDTLTALALSPD-DKLLFSAGHSRQIRVWDL---ETLKCIRSWK--GHEGPV 105
Query: 239 SDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKV 361
+ + G + D+ + +WD+ G T F H V
Sbjct: 106 MGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGV 146
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Frame = +2
Query: 71 LRGHNGWVTQIA---TNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY----GHS 229
L GH+G ++ +A +N + ++S+D+TL ++K E+ + R Y GH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 230 HFISDVVLSSDGNYALSGSWDKTLRLWD 313
+ V GN S SWD T+ LW+
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCTINLWN 233
Score = 39.9 bits (89), Expect = 0.001
Identities = 37/124 (29%), Positives = 52/124 (41%), Gaps = 22/124 (17%)
Frame = +2
Query: 23 FKPFSKMSETLKLRG--TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT------ 178
F P + T K+R LRGH V ++ K +M+ SSS D T+ +W
Sbjct: 183 FDPAESVDSTTKVRAYKILRGHKASVQSVSAQ-KSGNMVCSSSWDCTINLWNTNESTSEG 241
Query: 179 -------RDENNY-------GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 316
R NN G L GH+ +S VV + + S SWD ++R WD+
Sbjct: 242 ESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWP-EHDVIYSSSWDHSVRRWDV 300
Query: 317 AAGK 328
GK
Sbjct: 301 ETGK 304
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Frame = +2
Query: 71 LRGHNGWVTQIA---TNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY----GHS 229
L GH+G ++ +A +N + ++S+D+TL ++K E+ + R Y GH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 230 HFISDVVLSSDGNYALSGSWDKTLRLWD 313
+ V GN S SWD T+ LW+
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCTINLWN 233
Score = 39.9 bits (89), Expect = 0.001
Identities = 37/124 (29%), Positives = 52/124 (41%), Gaps = 22/124 (17%)
Frame = +2
Query: 23 FKPFSKMSETLKLRG--TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT------ 178
F P + T K+R LRGH V ++ K +M+ SSS D T+ +W
Sbjct: 183 FDPAESVDSTTKVRAYKILRGHKASVQSVSAQ-KSGNMVCSSSWDCTINLWNTNESTSEG 241
Query: 179 -------RDENNY-------GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 316
R NN G L GH+ +S VV + + S SWD ++R WD+
Sbjct: 242 ESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWP-EHDVIYSSSWDHSVRRWDV 300
Query: 317 AAGK 328
GK
Sbjct: 301 ETGK 304
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 44.8 bits (101), Expect = 5e-05
Identities = 29/90 (32%), Positives = 47/90 (52%)
Frame = +2
Query: 56 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 235
++ TL GH+ VT I D++L++S DKT+ +W + D NY + L HS
Sbjct: 255 QILSTLTGHSKKVTSIKFVGD-TDLVLTASSDKTVRIWGCSED-GNY-TSRHTLKDHSAE 311
Query: 236 ISDVVLSSDGNYALSGSWDKTLRLWDLAAG 325
+ V + + Y +S S D T +DL++G
Sbjct: 312 VRAVTVHATNKYFVSASLDSTWCFYDLSSG 341
Score = 31.1 bits (67), Expect = 0.63
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 215 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAA-GKTTRR--FEDHT 355
L GHS ++ + D + L+ S DKT+R+W + G T R +DH+
Sbjct: 260 LTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHS 309
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 44.4 bits (100), Expect = 6e-05
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +2
Query: 89 WVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKR-LYGHSHFISDVVLSSDG 265
W Q + N KY + SSS+D+T I+W+++ D + I K L GH + ++ S D
Sbjct: 278 WFLQFSHNGKY---LASSSKDQTAIIWEISADGH---ISLKHTLVGHHKPVIAILWSPDD 331
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFE 346
L+ ++ +R WD+ +G +E
Sbjct: 332 RQVLTCGAEEVIRRWDVDSGDCVHMYE 358
Score = 30.7 bits (66), Expect = 0.83
Identities = 24/73 (32%), Positives = 36/73 (49%)
Frame = +2
Query: 50 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 229
T KL L GH G V ++ +P M+ S+S D T+ +W L R N +K + G S
Sbjct: 520 TGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDR-INQQNQKKKLVQGSS 578
Query: 230 HFISDVVLSSDGN 268
+ V+ +GN
Sbjct: 579 S--NGVIHRCNGN 589
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 119 YPDM--ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWD 292
YPD I++ D+++ +W L E Q+ + +SD+ ++ DG + +S D
Sbjct: 370 YPDGQGIIAGMTDRSICMWDLDGREKECWKGQR-----TQKVSDIAMTDDGKWLVSVCKD 424
Query: 293 KTLRLWDLAA 322
+ L+D A
Sbjct: 425 SVISLFDREA 434
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 44.4 bits (100), Expect = 6e-05
Identities = 30/101 (29%), Positives = 49/101 (48%)
Frame = +2
Query: 56 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 235
++ TL GH+ VT + D++L++S DKT+ +W+ D NY L HS
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGD-GNYACGY-TLNDHSAE 311
Query: 236 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
+ V + Y +S S D T +DL++G + D +K
Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSK 352
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 44.4 bits (100), Expect = 6e-05
Identities = 30/101 (29%), Positives = 49/101 (48%)
Frame = +2
Query: 56 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 235
++ TL GH+ VT + D++L++S DKT+ +W+ D NY L HS
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGD-GNYACGY-TLNDHSAE 311
Query: 236 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
+ V + Y +S S D T +DL++G + D +K
Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSK 352
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 44.0 bits (99), Expect = 8e-05
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +2
Query: 77 GHNGW-VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 253
GH GW V + +P +++S +D+ + +W TR G L+GH + + V
Sbjct: 266 GH-GWDVKSVDWHPT-KSLLVSGGKDQLVKLWD-TRS----GRELCSLHGHKNIVLSVKW 318
Query: 254 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
+ +GN+ L+ S D+ ++L+D+ K + F HTK
Sbjct: 319 NQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTK 353
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/87 (27%), Positives = 39/87 (44%)
Frame = +2
Query: 50 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 229
T+K + RGH VT +A +P + + +S S D ++ W + + IP H
Sbjct: 341 TMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIPN----AHD 396
Query: 230 HFISDVVLSSDGNYALSGSWDKTLRLW 310
+ + D+ G SGS D T + W
Sbjct: 397 NSVWDLAWHPIGYLLCSGSNDHTTKFW 423
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 44.0 bits (99), Expect = 8e-05
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Frame = +2
Query: 56 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 235
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 236 ISDVV-LSSDGNY----ALSGSWDKTLRLWDLAAGKTTRRFEDH 352
+ + + Y +SGS D + +W+L G+ + + H
Sbjct: 69 VGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 44.0 bits (99), Expect = 8e-05
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Frame = +2
Query: 56 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 235
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 236 ISDVV-LSSDGNY----ALSGSWDKTLRLWDLAAGKTTRRFEDH 352
+ + + Y +SGS D + +W+L G+ + + H
Sbjct: 69 VGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 44.0 bits (99), Expect = 8e-05
Identities = 28/97 (28%), Positives = 43/97 (44%)
Frame = +2
Query: 68 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 247
T GH + ++A +P + ++S DKT +W + N G GHS + +
Sbjct: 334 TFEGHLDRLARVAFHPS-GKYLGTTSYDKTWRLWDI-----NTGAELLLQEGHSRSVYGI 387
Query: 248 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
DG A S D R+WDL G++ F+ H K
Sbjct: 388 AFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIK 424
Score = 31.5 bits (68), Expect = 0.47
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +2
Query: 80 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 259
H V+Q+ P+ + ++S D + +W RD + K L GH ++ + +++
Sbjct: 464 HANLVSQVKYEPQEGYFLATASYDMKVNIWS-GRDFSLV----KSLAGHESKVASLDITA 518
Query: 260 DGNYALSGSWDKTLRLW 310
D + + S D+T++LW
Sbjct: 519 DSSCIATVSHDRTIKLW 535
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 221 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKT 331
GH + V S +G + SG D R+WDL K+
Sbjct: 421 GHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKS 457
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/93 (26%), Positives = 47/93 (50%)
Frame = +2
Query: 83 NGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSD 262
+G V Q+ + D++ + ++D +++ W+ N + P L GH+ ++ V L
Sbjct: 227 SGPVGQVYSLVVGTDLLFAGTQDGSILAWRYNAATNCFE-PSASLTGHT--LAVVTLYVG 283
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKV 361
N SGS DKT+++W L + + DH+ V
Sbjct: 284 ANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSV 316
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +2
Query: 212 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 334
+L GH +S + L S + +GS D+TLR+WD A+G+ T
Sbjct: 146 QLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCT 186
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 47 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 169
E+ L L GH V+ IA P D + + S+D+TL VW
Sbjct: 139 ESFALLTQLDGHEKLVSGIAL-PSGSDKLYTGSKDETLRVW 178
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/101 (24%), Positives = 53/101 (52%)
Frame = +2
Query: 8 GXSSLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 187
G + +++ F+ SE++ + LRGH V ++ N ++ + RDK++ +W++ +E
Sbjct: 70 GNTCVWENFATDSESVSV---LRGHESEVKSVSWNAS-GSLLATCGRDKSVWIWEIQPEE 125
Query: 188 NNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 310
++ L GHS + V+ + S S+D T+++W
Sbjct: 126 DDEFDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIW 166
Score = 31.5 bits (68), Expect = 0.47
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 172
L GH V +A NP +I S S DKT+ +W+
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWE 49
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +2
Query: 209 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 337
K+L GHS ++D SS+ Y S S DKT+R+W+L+ G R
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIR 252
Score = 35.5 bits (78), Expect = 0.029
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Frame = +2
Query: 71 LRGHNGWVTQI--ATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 244
L GH+ VT ++N +Y I SSS DKT+ VW+L+R G+ + +YG S
Sbjct: 212 LTGHSKDVTDFDFSSNNQY---IASSSLDKTIRVWELSR-----GVCIRVIYGISPQYCI 263
Query: 245 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR--FED 349
+ N+ +G+ +K L +++ + G+ ++ FED
Sbjct: 264 RFHPVNNNFLSAGNANKELTVFNFSTGRIIKKLLFED 300
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/94 (28%), Positives = 43/94 (45%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
L+GH G V N + L+ +D+T+ +W R GI K H + DV
Sbjct: 14 LKGHEGAVLAARFNGD-GNYALTCGKDRTIRLWNPHR-----GILIKTYKSHGREVRDVH 67
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
++SD S D+ + WD++ G+ R+F H
Sbjct: 68 VTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGH 101
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 236 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
++ + +S+DGN L+G D TLRL D G+ + ++ H
Sbjct: 187 VNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGH 225
Score = 30.7 bits (66), Expect = 0.83
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 56 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 172
K+ R H+ VT ++ +PK D +L+SS D T+ VWK
Sbjct: 261 KVLSKFRAHDLVVTSVSYHPK-EDCMLTSSVDGTIRVWK 298
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = +2
Query: 209 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 313
++ GH ++ V + + +S +D++LR+WD
Sbjct: 96 RKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWD 130
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 41.9 bits (94), Expect = 3e-04
Identities = 29/99 (29%), Positives = 45/99 (45%)
Frame = +2
Query: 56 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 235
KL L GHN V + +P P ++ S S D + + + G + GH+ +
Sbjct: 191 KLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHD-AEGKTLLG----SMSGHTSW 245
Query: 236 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
+ V S DG +GS D+T+RLWDL + +H
Sbjct: 246 VLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNH 284
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 44 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 175
+E L G++ GH WV + +P I + S D+T+ +W L
Sbjct: 230 AEGKTLLGSMSGHTSWVLSVDASPD-GGAIATGSSDRTVRLWDL 272
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 41.5 bits (93), Expect = 4e-04
Identities = 25/83 (30%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +2
Query: 74 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 253
RGH G V I+ + + +LS+S DKT+ +WK+ ++ G+ + H+ +++ V
Sbjct: 325 RGHTGEVLDISWSKD--NYLLSASMDKTVRLWKVGSNDC-LGV-----FAHNSYVTSVQF 376
Query: 254 SS-DGNYALSGSWDKTLRLWDLA 319
+ + NY +SGS D +R+W+++
Sbjct: 377 NPVNENYFMSGSIDGKVRIWNIS 399
Score = 36.3 bits (80), Expect = 0.017
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = +2
Query: 194 YGIPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAA 322
+ I +K LY GH+ + D+ S D NY LS S DKT+RLW + +
Sbjct: 314 FRIMEKPLYEFRGHTGEVLDISWSKD-NYLLSASMDKTVRLWKVGS 358
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 41.5 bits (93), Expect = 4e-04
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +2
Query: 68 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 247
+L+GH + ++ + ++LSSS DKT+ +W + E + +L+ H+ +++ +
Sbjct: 501 SLKGHLDAILDLSWSKS--QLLLSSSMDKTVRLWDI---ETKTCL---KLFAHNDYVTCI 552
Query: 248 VLSS-DGNYALSGSWDKTLRLWDL 316
S D NY LSGS D +R+W +
Sbjct: 553 QFSPVDENYFLSGSLDAKIRIWSI 576
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +2
Query: 203 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 316
P L GH I D+ S LS S DKT+RLWD+
Sbjct: 498 PVCSLKGHLDAILDLSWSKS-QLLLSSSMDKTVRLWDI 534
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 41.5 bits (93), Expect = 4e-04
Identities = 29/87 (33%), Positives = 49/87 (56%)
Frame = +2
Query: 56 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 235
+LR TL+GH G V I+++ I+S S D ++IVW D+ + ++ L GH
Sbjct: 890 ELRATLKGHTGTVRAISSD---RGKIVSGSDDLSVIVW----DKQTTQLLEE-LKGHDSQ 941
Query: 236 ISDVVLSSDGNYALSGSWDKTLRLWDL 316
+S V + S G L+ + D T+++WD+
Sbjct: 942 VSCVKMLS-GERVLTAAHDGTVKMWDV 967
Score = 30.7 bits (66), Expect = 0.83
Identities = 25/104 (24%), Positives = 48/104 (46%)
Frame = +2
Query: 47 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 226
+T +L L+GH+ V+ + + +L+++ D T+ +W + D + +
Sbjct: 927 QTTQLLEELKGHDSQVSCVKMLSG--ERVLTAAHDGTVKMWDVRTDMCVATVGRCS---- 980
Query: 227 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
S +S S G A +G D +WD+ +GK + + HTK
Sbjct: 981 SAILSLEYDDSTGILAAAGR-DTVANIWDIRSGKQMHKLKGHTK 1023
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 41.1 bits (92), Expect = 6e-04
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Frame = +2
Query: 38 KMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP-QKR 214
K ++ + +L H V I +P +++ S + L +WKL E N K
Sbjct: 49 KKVPSVSYQSSLTYHGCAVNTIRFSPS-GELLASGADGGELFIWKLHPSETNQSWKVHKS 107
Query: 215 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
L H + D+ S D Y +SGS D + +WD+ G + + H
Sbjct: 108 LSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAH 153
Score = 32.7 bits (71), Expect = 0.21
Identities = 23/92 (25%), Positives = 42/92 (45%)
Frame = +2
Query: 35 SKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKR 214
S+ +++ K+ +L H V + +P ++S S D + I+W + N G +
Sbjct: 96 SETNQSWKVHKSLSFHRKDVLDLQWSPD-DAYLISGSVDNSCIIWDV-----NKGSVHQI 149
Query: 215 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 310
L H H++ V Y S S D+T R++
Sbjct: 150 LDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 41.1 bits (92), Expect = 6e-04
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Frame = +2
Query: 38 KMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP-QKR 214
K ++ + +L H V I +P +++ S + L +WKL E N K
Sbjct: 49 KKVPSVSYQSSLTYHGCAVNTIRFSPS-GELLASGADGGELFIWKLHPSETNQSWKVHKS 107
Query: 215 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
L H + D+ S D Y +SGS D + +WD+ G + + H
Sbjct: 108 LSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAH 153
Score = 32.7 bits (71), Expect = 0.21
Identities = 23/92 (25%), Positives = 42/92 (45%)
Frame = +2
Query: 35 SKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKR 214
S+ +++ K+ +L H V + +P ++S S D + I+W + N G +
Sbjct: 96 SETNQSWKVHKSLSFHRKDVLDLQWSPD-DAYLISGSVDNSCIIWDV-----NKGSVHQI 149
Query: 215 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 310
L H H++ V Y S S D+T R++
Sbjct: 150 LDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 41.1 bits (92), Expect = 6e-04
Identities = 28/100 (28%), Positives = 46/100 (46%)
Frame = +2
Query: 56 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 235
++R TL GH V + + ++S++ D+T+ +W L + G + S+
Sbjct: 306 RVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHK-----GYCTNTVLFTSN- 359
Query: 236 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
+ + LS DG SG D LRLWD+ GK H+
Sbjct: 360 CNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHS 399
Score = 34.3 bits (75), Expect = 0.067
Identities = 17/75 (22%), Positives = 35/75 (46%)
Frame = +2
Query: 131 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 310
+ + +D+ + +W + N G K LYG I D+ ++ D ++ + L +W
Sbjct: 246 LFTGGQDRAVKMW-----DTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVW 300
Query: 311 DLAAGKTTRRFEDHT 355
D+++G+ HT
Sbjct: 301 DVSSGRVRHTLTGHT 315
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 40.7 bits (91), Expect = 8e-04
Identities = 27/92 (29%), Positives = 48/92 (52%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
++GH +T + N + D++ S ++D T VW +N + R GHS +
Sbjct: 33 MKGHERPLTFLRYN-RNGDLLFSCAKDHTPTVWFA---DNGERLGTYR--GHSGAVWCCD 86
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 346
+S D + ++GS D+T +LWD+ +GK F+
Sbjct: 87 ISRDSSRLITGSADQTAKLWDVKSGKELFTFK 118
Score = 34.7 bits (76), Expect = 0.051
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 221 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 316
GH I+ + ++D ++ L+GS DKT +LWD+
Sbjct: 218 GHKEAITSLCKAADDSHFLTGSHDKTAKLWDM 249
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/84 (29%), Positives = 42/84 (50%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
L HN + +A + ++ S D +++VW+ RD+ + L GH+ + +
Sbjct: 255 LSEHNSGINALALSGTNGSLLHSGGSDGSILVWE--RDDGGDIVVVGMLRGHTESVLCLA 312
Query: 251 LSSDGNYALSGSWDKTLRLWDLAA 322
+ SD SGS DKT+RLW +A
Sbjct: 313 VVSD--ILCSGSADKTVRLWKCSA 334
Score = 33.9 bits (74), Expect = 0.089
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 224 HSHFISDVVLSSDGNYALSGSWDKTLRLW 310
H +S + LS DG S SWD+TL++W
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIW 192
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/102 (28%), Positives = 43/102 (42%)
Frame = +2
Query: 47 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 226
E K TLRGH V + +P M+ S S D T+ +W + G+ L GH
Sbjct: 106 ENWKAVMTLRGHTADVVDLNWSPD-DSMLASGSLDNTVHIWNMRT-----GMCTTVLRGH 159
Query: 227 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
+ V G++ S S DKT+ +W + R + H
Sbjct: 160 LSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGH 201
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/87 (27%), Positives = 45/87 (51%)
Frame = +2
Query: 68 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 247
TL GH ++ + + + P I+S+S D+T+ +W + + L GH+H++
Sbjct: 88 TLLGHLDYIRTVQFHHENP-WIVSASDDQTIRIWNW-QSRTCISV----LTGHNHYVMCA 141
Query: 248 VLSSDGNYALSGSWDKTLRLWDLAAGK 328
+ +S S D+T+R+WD+ A K
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDIGALK 168
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/81 (27%), Positives = 43/81 (53%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
L GH+ V + +P P +I+S + D+ + +W++ + L GH + +S V+
Sbjct: 200 LEGHDRGVNWASFHPTLP-LIVSGADDRQVKLWRMNETK---AWEVDTLRGHMNNVSSVM 255
Query: 251 LSSDGNYALSGSWDKTLRLWD 313
+ + +S S DK++R+WD
Sbjct: 256 FHAKQDIIVSNSEDKSIRVWD 276
Score = 34.3 bits (75), Expect = 0.067
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
L GHN +V + +PK D+++S+S D+T+ VW + + P L S SD+
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSDLF 189
Query: 251 LSSDG--NYALSG 283
D Y L G
Sbjct: 190 GGVDAIVKYVLEG 202
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 38 KMSETLKLR-GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 181
+M+ET TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/93 (24%), Positives = 47/93 (50%)
Frame = +2
Query: 83 NGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSD 262
NG V Q+ + D++ + ++D +++VW+ + + P L GH+ ++ V L
Sbjct: 220 NGPVGQVYSLVVGTDLLFAGTQDGSILVWRYNSTTSCFD-PAASLLGHT--LAVVSLYVG 276
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKV 361
N SG+ D ++++W L + + +HT V
Sbjct: 277 ANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSV 309
Score = 35.1 bits (77), Expect = 0.038
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 212 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 334
+L GH ++ + L S + + S D+T+R+WD A+G+ T
Sbjct: 139 QLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCT 179
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Frame = +2
Query: 182 DENNYGIP---QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 313
+EN Y IP + +L GH+ +S + + S G LSGS+D T+R++D
Sbjct: 159 EENRYQIPLSNEIQLKGHTKIVSSLAVDSAGARVLSGSYDYTVRMYD 205
Score = 33.9 bits (74), Expect = 0.089
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 224 HSHFISDVVLSSDGNYALSGSWDKTLRLWDL 316
H+ I+ V SSDG LS S+D +L++WDL
Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVWDL 402
Score = 30.7 bits (66), Expect = 0.83
Identities = 19/89 (21%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +2
Query: 74 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF-ISDVV 250
+GH +T +P+ + +L+SS D +L +W + + + + +L ++
Sbjct: 275 KGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCA 334
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAGKTTR 337
DG G D ++++W L G +R
Sbjct: 335 WDRDGKRIAGGVGDGSIQIWSLKPGWGSR 363
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +2
Query: 125 DMILSSSRDKTLIVWKLTRDENNYGIP-QKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 301
+++ S + L +WKL E N K L H + D+ S D Y +SGS D +
Sbjct: 18 ELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSC 77
Query: 302 RLWDLAAGKTTRRFEDH 352
+WD+ G + + H
Sbjct: 78 IIWDVNKGSVHQILDAH 94
Score = 32.7 bits (71), Expect = 0.21
Identities = 23/92 (25%), Positives = 42/92 (45%)
Frame = +2
Query: 35 SKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKR 214
S+ +++ K+ +L H V + +P ++S S D + I+W + N G +
Sbjct: 37 SETNQSWKVHKSLSFHRKDVLDLQWSPD-DAYLISGSVDNSCIIWDV-----NKGSVHQI 90
Query: 215 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 310
L H H++ V Y S S D+T R++
Sbjct: 91 LDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 122
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/94 (26%), Positives = 44/94 (46%)
Frame = +2
Query: 68 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 247
+L GH VT I + + ++ S+ D + VW + ++ + H+ + DV
Sbjct: 155 SLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKK---KVRAFLHHNAPVKDV 211
Query: 248 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED 349
S G LS +D T RL+D+ G T+ F++
Sbjct: 212 KWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKE 245
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/86 (24%), Positives = 39/86 (45%)
Frame = +2
Query: 68 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 247
T GH G + +A +P ++ + D +WK+ + +P GH +S +
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELP-----GHKDSVSCL 119
Query: 248 VLSSDGNYALSGSWDKTLRLWDLAAG 325
S DG SG D ++++D ++G
Sbjct: 120 AFSYDGQLLASGGLDGVVQIFDASSG 145
Score = 35.5 bits (78), Expect = 0.029
Identities = 27/93 (29%), Positives = 47/93 (50%)
Frame = +2
Query: 77 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 256
GHN VT P +I + S D +LIVW E+ + I + Y H+ ++ + ++
Sbjct: 195 GHNLNVTCGDFTPD-GKLICTGSDDASLIVWNPKTCESIH-IVKGHPY-HTEGLTCLDIN 251
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
S+ + A+SGS D ++ + ++ GK HT
Sbjct: 252 SNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHT 284
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 128 MILSSSRDKTLIVWKLTRDENNYGIPQ-KRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 304
M+ + + +++VWK T D + L GHS ++ + G SGS DKT++
Sbjct: 224 MLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVG--GQMLYSGSVDKTIK 281
Query: 305 LWDLAAGKTTRRFEDHT 355
+WDL + + HT
Sbjct: 282 MWDLNTLQCIMTLKQHT 298
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 215 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 328
L GH+ + + L + S S D TLR+WD +G+
Sbjct: 127 LEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQ 164
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 221 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 328
GH+ I+D+ S DG + +S S D +LR+WD+ K
Sbjct: 555 GHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAK 590
Score = 25.8 bits (54), Expect(2) = 1.3
Identities = 10/40 (25%), Positives = 18/40 (45%)
Frame = +2
Query: 194 YGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 313
+ + +KR Y H + V S +S + L++WD
Sbjct: 463 FDMSEKRRYAHDGEVIGVACDSTNTLMISAGYHGDLKVWD 502
Score = 22.6 bits (46), Expect(2) = 1.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 290 DKTLRLWDLAAGKTTRRFEDHT 355
D +RL+D+ K R F HT
Sbjct: 536 DFVIRLYDVVTLKMVREFRGHT 557
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = +2
Query: 110 NPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSW 289
NP + S+S D T+ +W + G GH + + S +G Y SGS
Sbjct: 507 NPNKQLTLASASFDSTVKLW-----DAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSL 561
Query: 290 DKTLRLWDLAAGKTTRRF 343
DK++ +W + GK + +
Sbjct: 562 DKSIHIWSIKEGKIVKTY 579
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 224 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
H I + + G+Y L+GS D+T +WD+ A + ++FE H+
Sbjct: 364 HKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHS 407
Score = 30.3 bits (65), Expect = 1.1
Identities = 26/99 (26%), Positives = 46/99 (46%)
Frame = +2
Query: 56 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 235
+L TL H G + + N K D +L+ S D+T +VW + +E +++ HS
Sbjct: 356 ELISTLSKHKGPIFSLKWNKK-GDYLLTGSVDRTAVVWDVKAEE-----WKQQFEFHSGP 409
Query: 236 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
DV ++ ++A S S D + L + + + F H
Sbjct: 410 TLDVDWRNNVSFATS-STDSMIYLCKIGETRPAKTFTGH 447
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +2
Query: 203 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
P K GH ++ V G+ S S D T ++W++ +HTK
Sbjct: 440 PAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTK 491
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 38.3 bits (85), Expect = 0.004
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Frame = +2
Query: 17 SLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 196
++F P S + K + +GH V +A + +LSSS DKT+ +W L+
Sbjct: 491 NIFVPDSLFGLSEKPFCSFQGHVDDVLDLAWSKS--QHLLSSSMDKTVRLWNLSSQTC-- 546
Query: 197 GIPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKV 361
+++ HS +++ + + D Y +SGS D +R+W + + ++ H V
Sbjct: 547 ----LKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVWSIPDRQVVDWYDLHEMV 598
Score = 31.1 bits (67), Expect = 0.63
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 152 KTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV--LSSDGNYALSGSWDKTLRLWDLAA 322
K+L + + ++ +G+ +K + DV+ S + LS S DKT+RLW+L++
Sbjct: 485 KSLSLENIFVPDSLFGLSEKPFCSFQGHVDDVLDLAWSKSQHLLSSSMDKTVRLWNLSS 543
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/78 (23%), Positives = 38/78 (48%)
Frame = +2
Query: 92 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 271
++ ++ +PK D+++++S D + W++TR + + K H + DG
Sbjct: 29 ISSLSFSPK-ADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGTT 87
Query: 272 ALSGSWDKTLRLWDLAAG 325
+G DK ++W L +G
Sbjct: 88 VFTGGCDKQAKMWPLLSG 105
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 37.9 bits (84), Expect = 0.005
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 131 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRL 307
+LSSS DKT+ +W L+ +++ HS +++ + + D NY +SGS D +R+
Sbjct: 482 LLSSSMDKTVRLWDLSSKTC------LKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRI 535
Query: 308 WDL 316
W +
Sbjct: 536 WSI 538
Score = 34.3 bits (75), Expect = 0.067
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +2
Query: 83 NGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV-LS- 256
NG ++ +PK S SR K++ + + E +G+ +K + + DV+ LS
Sbjct: 419 NGSPEPVSMSPKRRGRT-SFSR-KSVSLDNVLVPEAVFGLSEKPVCSFVGHLDDVLDLSW 476
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
S + LS S DKT+RLWDL++ KT + H+
Sbjct: 477 SKSQHLLSSSMDKTVRLWDLSS-KTCLKVFSHS 508
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 37.9 bits (84), Expect = 0.005
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR--DE------NNYGIPQKRLY-- 220
L H G V Q+ +P + ++ SS D+ L+VW + R DE + P + L+
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSH 360
Query: 221 -GHSHFISDVVLSSDGNYALSG-SWDKTLRLWDLA 319
GH ISD + D + +S + D +L++W +A
Sbjct: 361 GGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMA 395
Score = 31.1 bits (67), Expect = 0.63
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 203 PQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAAGKTTR 337
P RL GH + SS Y LSGS D+ + LWD++A T +
Sbjct: 161 PDLRLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDK 206
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 37.9 bits (84), Expect = 0.005
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +2
Query: 68 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 247
T+ GH+ T ++ N P+++ + S+D+T+ +W L+ +E + G FI+
Sbjct: 364 TINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIA-- 421
Query: 248 VLSSDGNYALS-GSWDKTLRLWD 313
S D + L+ G L+LWD
Sbjct: 422 -FSPDNPFLLAMGGVMGELKLWD 443
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
N S S DK +++WD+A G E HTK
Sbjct: 247 NILASASADKKVKVWDVATGTCKITMEHHTK 277
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 203 PQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLA 319
P + GH + V + S N +GS D+T++LWDL+
Sbjct: 361 PSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLS 400
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 37.9 bits (84), Expect = 0.005
Identities = 25/92 (27%), Positives = 48/92 (52%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
++GH +T + N + D++ S ++D T +W +N + R GH+ +
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFA---DNGERLGTYR--GHNGAVWCCD 59
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 346
+S D + ++GS D+T +LWD+ +GK F+
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFK 91
Score = 36.3 bits (80), Expect = 0.017
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 131 ILSSSRDKTLIVWKLTRDENNYGIPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 307
I+S DK + +W E + Q GH I+ + ++D ++ L+GS DKT +L
Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 308 WDL 316
WD+
Sbjct: 220 WDM 222
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 37.9 bits (84), Expect = 0.005
Identities = 25/92 (27%), Positives = 48/92 (52%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
++GH +T + N + D++ S ++D T +W +N + R GH+ +
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFA---DNGERLGTYR--GHNGAVWCCD 59
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 346
+S D + ++GS D+T +LWD+ +GK F+
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFK 91
Score = 36.3 bits (80), Expect = 0.017
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 131 ILSSSRDKTLIVWKLTRDENNYGIPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 307
I+S DK + +W E + Q GH I+ + ++D ++ L+GS DKT +L
Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 308 WDL 316
WD+
Sbjct: 220 WDM 222
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 37.9 bits (84), Expect = 0.005
Identities = 25/92 (27%), Positives = 48/92 (52%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
++GH +T + N + D++ S ++D T +W +N + R GH+ +
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFA---DNGERLGTYR--GHNGAVWCCD 59
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 346
+S D + ++GS D+T +LWD+ +GK F+
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFK 91
Score = 36.3 bits (80), Expect = 0.017
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 131 ILSSSRDKTLIVWKLTRDENNYGIPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 307
I+S DK + +W E + Q GH I+ + ++D ++ L+GS DKT +L
Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 308 WDL 316
WD+
Sbjct: 220 WDM 222
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 37.5 bits (83), Expect = 0.007
Identities = 30/110 (27%), Positives = 50/110 (45%)
Frame = +2
Query: 26 KPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP 205
KP S + + ++ LRGH V A + +++ S D+ + VW + + Y +
Sbjct: 227 KPSSMVQKMQNIK-RLRGHRNAV-YCAILDRSGRYVITGSDDRLVKVWSM---DTAYCLA 281
Query: 206 QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
R GH I+D+ +SS+ + S S D +R+W L G HT
Sbjct: 282 SCR--GHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHT 329
Score = 33.9 bits (74), Expect = 0.089
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPK--YPDMILSSSRDKTLIVW 169
LRGH G VT IA +P+ P +LSSS D T +W
Sbjct: 325 LRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIW 359
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 37.5 bits (83), Expect = 0.007
Identities = 27/90 (30%), Positives = 36/90 (40%)
Frame = +2
Query: 44 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 223
S T+ RG GH V +A +P S D LI+W N +K
Sbjct: 279 SPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDA 338
Query: 224 HSHFISDVVLSSDGNYALSGSWDKTLRLWD 313
H + D N L+GS D T+RL+D
Sbjct: 339 DLHCVD--WNPHDDNLILTGSADNTVRLFD 366
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 8/93 (8%)
Frame = +2
Query: 80 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI-------PQKRLYGHSHFI 238
H G V +I P+ ++ + + +++W + N + + P L GH
Sbjct: 163 HPGEVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNA 222
Query: 239 S-DVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 334
+ + + LSG DK++ LW + TT
Sbjct: 223 EFALAMCPTEPFVLSGGKDKSVVLWSIQDHITT 255
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 224 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
H +S + L+ D SGSWDKTL++W L+ K E H
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAH 286
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +2
Query: 128 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 307
++ S S DKTL VW+L+ + + + H ++ VV D + +GS D TL++
Sbjct: 259 LLYSGSWDKTLKVWRLSDSK-----CLESIEAHDDAVNTVVSGFD-DLVFTGSADGTLKV 312
Query: 308 W 310
W
Sbjct: 313 W 313
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/87 (22%), Positives = 43/87 (49%)
Frame = +2
Query: 53 LKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSH 232
L+ + +++ H+ V IA + + + S D+ + VW E + + L H
Sbjct: 225 LRCKESIKAHDDAVNAIAVSTN--GTVYTGSADRRIRVWAKPTGEKRHTLVAT-LEKHKS 281
Query: 233 FISDVVLSSDGNYALSGSWDKTLRLWD 313
++ + L+ DG+ SGS D+++ +W+
Sbjct: 282 AVNALALNDDGSVLFSGSCDRSILVWE 308
Score = 35.5 bits (78), Expect = 0.029
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Frame = +2
Query: 44 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 223
S + +RG LRGH+ + + D++LS S D+T+ +W+ D ++Y + L G
Sbjct: 313 SNYMAVRGALRGHDKAILSLFN---VSDLLLSGSADRTVRIWRRGPD-SSYSCLEV-LSG 367
Query: 224 HSHFISDVVL-----SSDGNYALSGSWDKTLRLWDLAAGKTTRRF 343
H+ + + D +SGS D ++ W ++ K F
Sbjct: 368 HTKPVKSLAAVREKELDDVVSIISGSLDGEVKCWKVSVTKPDNSF 412
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Frame = +2
Query: 206 QKRLY-GHSHFISDVVLSSDGNYALSGSWDKTLRLW---DLAAGKTTRRFED 349
+KRL+ H+ ++ + +S DG + S SWDKTL++W DL ++ + +D
Sbjct: 187 KKRLWIEHADAVTALAVS-DG-FIYSVSWDKTLKIWRASDLRCKESIKAHDD 236
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 37.5 bits (83), Expect = 0.007
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Frame = +2
Query: 65 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 244
G LRGH + +A D++LS S DK+L VW+ E L GH+ +
Sbjct: 322 GALRGHRKAIMCLAVAS---DLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKS 378
Query: 245 VVLS---SDGN-----YALSGSWDKTLRLWDL 316
+ +S SD N SGS D +L++W+L
Sbjct: 379 LAVSVSDSDSNSDYSCMVYSGSLDLSLKVWNL 410
Score = 33.1 bits (72), Expect = 0.16
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 224 HSHFISDVVLSSDGNYALSGSWDKTLRLW 310
H +S + LS DG+ S SWD++ ++W
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIW 219
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = +2
Query: 131 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 310
+ + S DK + VW +D+ + + L H ++ + +S DG SG+ D+++ +W
Sbjct: 249 VYTGSADKKIKVWN-KKDKKHSLVAT--LTKHLSAVNALAISEDGKVLYSGACDRSILVW 305
Query: 311 D 313
+
Sbjct: 306 E 306
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 37.1 bits (82), Expect = 0.010
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = +2
Query: 74 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 253
+GH V +A N + S S D+T +W + + L GH+ + +
Sbjct: 17 QGHKKKVHSVAWNSN-GTKLASGSVDQTARIWNI-EPHGHSKAKDLELKGHTDSVDQLCW 74
Query: 254 S-SDGNYALSGSWDKTLRLWDLAAGKTTRRFE 346
+ + S DK++RLWD +GK T++ E
Sbjct: 75 DPKHSDLVATASGDKSVRLWDARSGKCTQQVE 106
Score = 36.3 bits (80), Expect = 0.017
Identities = 23/90 (25%), Positives = 42/90 (46%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
L+GH V Q+ +PK+ D++ ++S DK++ +W + Q L G + ++
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDA---RSGKCTQQVELSGEN---INIT 115
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAGKTTRR 340
DG + G+ D L + D+ K R
Sbjct: 116 YKPDGTHVAVGNRDDELTILDVRKFKPLHR 145
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 128 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLR 304
++LSSS DKT+ +W + +L+ H+ +++ V + D +Y +SGS D +R
Sbjct: 532 LLLSSSMDKTVRLWDIETQSC------LKLFAHNDYVTCVQFNPLDEDYFISGSLDAKIR 585
Query: 305 LWDLA 319
+W+++
Sbjct: 586 IWNIS 590
Score = 30.7 bits (66), Expect = 0.83
Identities = 22/80 (27%), Positives = 35/80 (43%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
L HN +VT + NP D +S S D + +W ++ N + L ++ V
Sbjct: 555 LFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNIS---NRQVVEWNDL---KEMVTAVC 608
Query: 251 LSSDGNYALSGSWDKTLRLW 310
+ DG A GS + RL+
Sbjct: 609 YTPDGQAAFVGSINGHCRLY 628
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 185 ENNYGIPQKRLYGHSHFISDVV-LS-SDGNYALSGSWDKTLRLWDLAAGKTTRRF 343
E + + K + + + DV+ LS S LS S DKT+RLWD+ + F
Sbjct: 502 ETVFSLSDKPICSFTGHLDDVLDLSWSRSQLLLSSSMDKTVRLWDIETQSCLKLF 556
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 37.1 bits (82), Expect = 0.010
Identities = 23/79 (29%), Positives = 35/79 (44%)
Frame = +2
Query: 80 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 259
H V + + ++ILS S D VW R P L GH ++ +
Sbjct: 270 HTSDVNTVCFADESGNLILSGSDDNLCKVWD-RRCFIGRDKPAGVLVGHLEGVTFIDSRG 328
Query: 260 DGNYALSGSWDKTLRLWDL 316
DG Y +S D+T++LWD+
Sbjct: 329 DGRYFISNGKDQTIKLWDI 347
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 221 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
G+S I V S+DG ++GS D ++ ++DL A + + R HT
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHT 271
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 37.1 bits (82), Expect = 0.010
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ---KRLYGHSHFIS 241
L GH V + +P D++ S S D T+ VW D+ Y Q + GHS +
Sbjct: 159 LTGHTQDVKMVQWHPTM-DVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVW 217
Query: 242 DVVLSSDGNYALSGSWDKTLRLW 310
+ ++ G+ ++ S D TL++W
Sbjct: 218 SISFNAAGDKMVTCSDDLTLKIW 240
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +2
Query: 80 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQK---RLYGHSHFISDVV 250
H V A +P ++ ++S D T +WK NYG + L GH + + V
Sbjct: 73 HTRTVRSCAWSPS-GQLLATASFDGTTGIWK------NYGSEFECISTLEGHENEVKSVS 125
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAG 325
++ G+ + S DK++ +W++ G
Sbjct: 126 WNASGSCLATCSRDKSVWIWEVLEG 150
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 37.1 bits (82), Expect = 0.010
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 221 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 337
GHS ++ VV S + L+GS D T R+WD GK +
Sbjct: 199 GHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVK 237
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 36.7 bits (81), Expect = 0.013
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Frame = +2
Query: 50 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ-KRLYGH 226
T KL GH VT + + +++S S+D ++ VW L R +++ Q LY H
Sbjct: 109 TGKLLKKWHGHYRSVTCLVFSGD-DSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEH 167
Query: 227 S---HFIS--DVVLSSDGNYA--LSGSWDKTLRLWDLAAGK 328
+ H +S D+V+ G A +S S D+T ++W L+ GK
Sbjct: 168 NFNEHTMSVTDIVIDYGGCNAVIISSSEDRTCKVWSLSRGK 208
Score = 29.1 bits (62), Expect = 2.5
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = +2
Query: 236 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
I + +++G Y + G + LW++A GK +++ H
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGH 119
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 36.7 bits (81), Expect = 0.013
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 203 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 310
P + LYGH+ + D+ S D N LS S DKT+RLW
Sbjct: 264 PFQELYGHTGDVLDLAWS-DSNLLLSASKDKTVRLW 298
Score = 36.3 bits (80), Expect = 0.017
Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
L GH G V +A + +++LS+S+DKT+ +W+ D+ + ++ H+++++ V
Sbjct: 268 LYGHTGDVLDLAWSDS--NLLLSASKDKTVRLWRTGCDQCLH------VFHHNNYVTCVE 319
Query: 251 LS--SDGNYALSGSWDKTLRLWDLA 319
+ + N+A SGS D R+W L+
Sbjct: 320 FNPVNKNNFA-SGSIDGKARIWGLS 343
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 34.7 bits (76), Expect(2) = 0.016
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 218 YGHSHFISDVVLSSDGNYALSGSWDKTLRLW---DLAAGKTTRRFED 349
+ H IS + LS D SGSWDKT ++W DL ++ ED
Sbjct: 208 FRHLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHED 254
Score = 29.9 bits (64), Expect = 1.4
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = +2
Query: 92 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 271
VT IA + ++ S D T+ W+ + N G+ L GH ++ + L + GN
Sbjct: 303 VTAIAVDQS-ATLVYCGSSDGTVNFWERENNMKNGGV----LKGHK--LAVLCLVAAGNL 355
Query: 272 ALSGSWDKTLRLW 310
SGS D +R+W
Sbjct: 356 MFSGSADLGIRVW 368
Score = 20.6 bits (41), Expect(2) = 0.016
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +2
Query: 125 DMILSSSRDKTLIVWKLTRDENN 193
D I + +D + VWK E+N
Sbjct: 147 DKIFTGHQDGKIRVWKAASKESN 169
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 36.3 bits (80), Expect = 0.017
Identities = 23/77 (29%), Positives = 35/77 (45%)
Frame = +2
Query: 86 GWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDG 265
G V Q+ M+ + + +++VWK T E++ L GH H G
Sbjct: 264 GVVGQVHAMTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGH-HSGEVTCFVVGG 322
Query: 266 NYALSGSWDKTLRLWDL 316
SGS DKT+++WDL
Sbjct: 323 EVLYSGSVDKTIKVWDL 339
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 215 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 337
L GH + I + L + S S D TL +WD +G+ R
Sbjct: 183 LEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVR 223
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 36.3 bits (80), Expect = 0.017
Identities = 22/58 (37%), Positives = 25/58 (43%)
Frame = +2
Query: 182 DENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
D N P GH +S V S+ A S S D TLRLWD+ R F HT
Sbjct: 534 DLRNISQPLHVFSGHKKAVSYVKFLSNNELA-SASTDSTLRLWDVKDNLPVRTFRGHT 590
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 36.3 bits (80), Expect = 0.017
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR-DENNYGI-------PQKRLY-- 220
+ H G V Q+ +P + ++ SS D+ L+VW L R E I P + L+
Sbjct: 300 MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSH 359
Query: 221 -GHSHFISDVVLSSDGNYAL-SGSWDKTLRLWDLA 319
GH ISD + + + + S + D +L++W +A
Sbjct: 360 GGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMA 394
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 36.3 bits (80), Expect = 0.017
Identities = 17/78 (21%), Positives = 37/78 (47%)
Frame = +2
Query: 92 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 271
++ ++ +P+ D+++++S D + W+++R + K H + DG
Sbjct: 28 ISSLSFSPR-ADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTT 86
Query: 272 ALSGSWDKTLRLWDLAAG 325
SG DK ++W L +G
Sbjct: 87 VFSGGCDKQAKMWPLLSG 104
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWD 313
N +GSWDKTL+ WD
Sbjct: 127 NLLATGSWDKTLKYWD 142
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 36.3 bits (80), Expect = 0.017
Identities = 25/107 (23%), Positives = 44/107 (41%)
Frame = +2
Query: 5 SGXSSLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRD 184
+G F+ F +T +++ L GH V + +P ++ SSS D T+ +W +
Sbjct: 451 AGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSP-LTQLLASSSWDYTVRLWDVFAS 509
Query: 185 ENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG 325
+ + H+H + V DG S + D + WD G
Sbjct: 510 KGTV-----ETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEG 551
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 215 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 334
L GH + ++ S S SWD T+RLWD+ A K T
Sbjct: 473 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGT 512
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 221 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
GH ++ V S D +G+ D +++W++ +G F +HT
Sbjct: 347 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHT 391
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 36.3 bits (80), Expect = 0.017
Identities = 25/107 (23%), Positives = 44/107 (41%)
Frame = +2
Query: 5 SGXSSLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRD 184
+G F+ F +T +++ L GH V + +P ++ SSS D T+ +W +
Sbjct: 491 AGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSP-LTQLLASSSWDYTVRLWDVFAS 549
Query: 185 ENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG 325
+ + H+H + V DG S + D + WD G
Sbjct: 550 KGTV-----ETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEG 591
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 215 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 334
L GH + ++ S S SWD T+RLWD+ A K T
Sbjct: 513 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGT 552
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 221 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
GH ++ V S D +G+ D +++W++ +G F +HT
Sbjct: 387 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHT 431
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 35.9 bits (79), Expect = 0.022
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 128 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 307
M+ S+ DK ++W + P+ L H+ I+D+ S + S+DKT+R+
Sbjct: 665 MLASAGHDKKAVLWYTDTMK-----PKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRV 719
Query: 308 WDL-AAGKTTRRFEDHTKV 361
WD G + R F H+ +
Sbjct: 720 WDADNKGYSLRTFMGHSSM 738
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 35.9 bits (79), Expect = 0.022
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 47 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 175
E K G L GH G V + ++P D+++S SRD +W L
Sbjct: 158 EENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL 200
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +2
Query: 176 TRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
T EN + H + I D+ + L+ S D+T+++WD+ K T HT
Sbjct: 111 THQENTEKARFRDWIAHYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHT 170
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 131 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRL 307
+L++S D+T+ VW + ++ G+ L GH+ + + ++ + +SGS D L
Sbjct: 143 LLTASGDQTIKVWDVEENKCT-GV----LIGHTGTVKSMCSHPTNSDLLVSGSRDGCFAL 197
Query: 308 WDLAAGKTTRRFE 346
WDL ++ + E
Sbjct: 198 WDLRCKSSSHKEE 210
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 35.9 bits (79), Expect = 0.022
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +2
Query: 128 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 307
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 522 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 576
Query: 308 WD 313
WD
Sbjct: 577 WD 578
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 35.9 bits (79), Expect = 0.022
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +2
Query: 128 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 307
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 308 WD 313
WD
Sbjct: 579 WD 580
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 35.9 bits (79), Expect = 0.022
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +2
Query: 128 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 307
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 308 WD 313
WD
Sbjct: 579 WD 580
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 35.9 bits (79), Expect = 0.022
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +2
Query: 128 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 307
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 308 WD 313
WD
Sbjct: 579 WD 580
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 35.9 bits (79), Expect = 0.022
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +2
Query: 128 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 307
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 308 WD 313
WD
Sbjct: 579 WD 580
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 35.5 bits (78), Expect = 0.029
Identities = 24/105 (22%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Frame = +2
Query: 44 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 223
+++L + + H G V +A + ++ + S D+ L++W L + P + +
Sbjct: 214 NKSLDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASK--PVQSVVA 271
Query: 224 HSHFISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTT-RRFEDH 352
HS ++ + + + + +GS DKT++L+DL T F+ H
Sbjct: 272 HSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSH 316
Score = 33.9 bits (74), Expect = 0.089
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Frame = +2
Query: 68 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI------PQKRLY--- 220
T H V Q+ NPK ++ S + L+VW L+R + + P + L+
Sbjct: 312 TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHG 371
Query: 221 GHSHFISDVVLSSDGNYALSG-SWDKTLRLWDLA 319
GH+ ISD + ++ +S + D L++W +A
Sbjct: 372 GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 35.5 bits (78), Expect = 0.029
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Frame = +2
Query: 221 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTR----RFEDHT 355
GH+ + + S GN SG D + +WD LA+ K TR RFE+HT
Sbjct: 250 GHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHT 300
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 35.5 bits (78), Expect = 0.029
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +2
Query: 2 ASGXSSLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 175
A G + + SET+ +L GH V +I T P P +++++S+D+++ +W +
Sbjct: 103 AGGVKGIIRVIDVNSETI--HKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNV 158
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 35.1 bits (77), Expect = 0.038
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
L GH +V +P M+++ S D T+ VW +N+ I + H + DVV
Sbjct: 174 LLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDARVHTSNW-IAE---INHGLPVEDVV 229
Query: 251 -LSSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTK 358
L S G A +G ++++WDL GK E H K
Sbjct: 230 YLPSGGLIATAGG--NSVKVWDLIGGGKMVCSMESHNK 265
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 35.1 bits (77), Expect = 0.038
Identities = 24/83 (28%), Positives = 37/83 (44%)
Frame = +2
Query: 68 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 247
T + H V Q NPK+ D+ S+S D TL +W + + IP +S
Sbjct: 144 TFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDF----EILSCD 199
Query: 248 VLSSDGNYALSGSWDKTLRLWDL 316
D + S DKT+++WD+
Sbjct: 200 WNKYDDCILATSSVDKTVKVWDV 222
Score = 33.9 bits (74), Expect = 0.089
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +2
Query: 80 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS- 256
H V + NP D L+SS D T+ +W + R + + H++ + V +
Sbjct: 105 HAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPAS-----VRTFKEHAYCVYQAVWNP 159
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
G+ S S D TLR+WD+ +T H
Sbjct: 160 KHGDVFASASGDCTLRIWDVREPGSTMIIPAH 191
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 35.1 bits (77), Expect = 0.038
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = +2
Query: 131 ILSSSRDKTLIVWKLTRD--ENNYGIPQKRLYGHSHFISDVVLSSDGN----YALSGSWD 292
ILS+ RD + V + E + I Q GHS FI+ S Y +SGS D
Sbjct: 170 ILSADRDFKIRVTVFPKKPLEGAHEI-QSFCLGHSEFITCTAFVSTPELTQGYLMSGSGD 228
Query: 293 KTLRLWDLAAG 325
T+RLWD+ +G
Sbjct: 229 STVRLWDITSG 239
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 34.7 bits (76), Expect = 0.051
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 224 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
H +S + L+ + SGSWDKTL++W L+ K + H
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAH 290
Score = 31.5 bits (68), Expect = 0.47
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 128 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 307
++ S S DKTL VW+L+ + + + H I+ V D + +GS D TL++
Sbjct: 263 LLYSGSWDKTLKVWRLSDSK-----CLESIQAHDDAINTVAAGFD-DLLFTGSADGTLKV 316
Query: 308 WDL-AAGKTTRRF 343
W GK T+ F
Sbjct: 317 WKRELQGKGTKHF 329
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 34.7 bits (76), Expect = 0.051
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 224 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 328
H ++ LS G LSGS DKT+R+W + GK
Sbjct: 894 HKSTVTCFSLSETGECVLSGSADKTIRVWQIVKGK 928
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 34.7 bits (76), Expect = 0.051
Identities = 31/117 (26%), Positives = 51/117 (43%)
Frame = +2
Query: 5 SGXSSLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRD 184
S ++ KP S M + ++ LRGH V A + +++ S D+ + +W +
Sbjct: 280 SACHAIAKP-STMVQKMQNIKKLRGHRNAV-YCAIFDRSGRYVITGSDDRLVKIWSM--- 334
Query: 185 ENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
E + R GH I+D+ +SS+ S S D +R+W L G HT
Sbjct: 335 ETALCLASCR--GHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHT 389
Score = 33.1 bits (72), Expect = 0.16
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 12/92 (13%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDM--ILSSSRDKTLIVWK------LTR----DENNYGIPQKR 214
LRGH G VT IA +P+ + +LSSS D T +W L R ++
Sbjct: 385 LRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQWLPRIYVPSPSDANTGSTS 444
Query: 215 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 310
SH I +++G ++GS D R+W
Sbjct: 445 NASQSHQILCCAYNANGTIFVTGSSDSNARVW 476
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 34.7 bits (76), Expect = 0.051
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 212 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 334
R H ++ + ++DG Y LS D +RLWD+ +G+ T
Sbjct: 307 RATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNT 347
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 34.3 bits (75), Expect = 0.067
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 169
L GH+ V ++ NPK P M+ S+S D+T+ +W
Sbjct: 481 LSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 34.3 bits (75), Expect = 0.067
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 212 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 337
RL+GH I+ + L D SGSWD ++R+WD ++ K +
Sbjct: 252 RLWGHEGPITSLAL--DMTSIFSGSWDMSVRIWDRSSMKCVK 291
Score = 31.9 bits (69), Expect = 0.36
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +2
Query: 215 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG 325
LYGH+ + V L + + +D +R+WD+ G
Sbjct: 158 LYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEG 194
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 34.3 bits (75), Expect = 0.067
Identities = 26/95 (27%), Positives = 44/95 (46%)
Frame = +2
Query: 68 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 247
T+ GH V +A + ++ S SRDK+++ + E++ +L GH I +
Sbjct: 246 TMEGHRLRVGALAWSSS---VLSSGSRDKSILQRDIRTQEDHVS----KLKGHKSEICGL 298
Query: 248 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
SSD SG D L +W+ + + RF +H
Sbjct: 299 KWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEH 333
Score = 33.1 bits (72), Expect = 0.16
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 215 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 316
L GHS+ + + +S DG ++G+ D+TLR W++
Sbjct: 418 LTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 34.3 bits (75), Expect = 0.067
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 59 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 208
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 194 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 243
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 34.3 bits (75), Expect = 0.067
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 59 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 208
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 229 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 278
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 34.3 bits (75), Expect = 0.067
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 68 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK 172
TL GH G V Q+A +PK+ ++ S S D +I+WK
Sbjct: 51 TLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWK 86
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 33.9 bits (74), Expect = 0.089
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 68 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK 172
TL GH G V ++A +PKY ++ S S D +I+WK
Sbjct: 51 TLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWK 86
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 33.9 bits (74), Expect = 0.089
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +2
Query: 131 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 310
+ + S D T+ W L +D G + GH +S +V+ + Y SGSWD T+RLW
Sbjct: 600 VYTGSGDNTIKAWSL-QD----GSLLCTMSGHKSVVSTLVVVNGVLY--SGSWDGTVRLW 652
Query: 311 DLA 319
L+
Sbjct: 653 SLS 655
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 224 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKT 331
H H ++ V LS D + S S D T+ WD+++GK+
Sbjct: 144 HQHSVTGVALSDDDSRGFSVSKDGTILHWDVSSGKS 179
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 33.1 bits (72), Expect = 0.16
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
N SGS DK +++WD+A GK E H K
Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEHHEK 258
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 33.1 bits (72), Expect = 0.16
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 218 YGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 337
+GH ++ + LS D N+ ++GS D T+ LW + T+R
Sbjct: 2665 FGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIHKAFTSR 2704
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 44 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 175
S+ K T GH VT +A +P + +++ SRD T+++W++
Sbjct: 2655 SDGAKTLETAFGHCAPVTCLALSPDN-NFLVTGSRDSTVLLWRI 2697
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 33.1 bits (72), Expect = 0.16
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 169
L GH W + NP+Y ++ILS D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 33.1 bits (72), Expect = 0.16
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 71 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 169
L GH W + NP+Y +ILS+ D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLW 280
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 197 GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 313
G+ L H ++D+ SSD ++ +S S D T+++WD
Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWD 1109
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +2
Query: 128 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 307
M++ S+++ + +W D + + + G ++S +V S GN+ +SGS L L
Sbjct: 1203 MVMYSTQNCGIHLWDTRSDLDAWTLKANPEEG---YVSSLVTSPCGNWFVSGSSRGVLTL 1259
Query: 308 WDL 316
WDL
Sbjct: 1260 WDL 1262
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 224 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 337
H + V LS D + S S D T+ WD+++GKT +
Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDK 197
Score = 32.7 bits (71), Expect = 0.21
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +2
Query: 131 ILSSSRDKTLIVWKLTRDENNYGIP--QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 304
+ S DK +W ++G+ + R HS + +SSDG Y +G D+ +
Sbjct: 190 VSSGKTDK--YIWPSDEILKSHGMKLREPRNKNHSRESLALAVSSDGRYLATGGVDRHVH 247
Query: 305 LWDLAAGKTTRRFEDH 352
+WD+ + + F H
Sbjct: 248 IWDVRTREHVQAFPGH 263
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 32.7 bits (71), Expect = 0.21
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 221 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 328
GH+ ++ + S G + SGS D ++R+W++ G+
Sbjct: 421 GHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGR 456
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 32.3 bits (70), Expect = 0.27
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +2
Query: 77 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 256
GH+G + I+ + + +LS+S D ++ +W++ E+ GI + H+++++ V +
Sbjct: 354 GHSGDILDISWSKN--NRLLSASVDNSVRLWQIGC-EDCLGI-----FSHNNYVTSVQFN 405
Query: 257 S-DGNYALSGSWDKTLRLW 310
D ++ +SGS D +R+W
Sbjct: 406 PVDDDHFISGSIDGKVRIW 424
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 80 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 181
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 32.3 bits (70), Expect = 0.27
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +2
Query: 77 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 256
GH+G + I+ + + +LS+S D ++ +W++ E+ GI + H+++++ V +
Sbjct: 354 GHSGDILDISWSKN--NRLLSASVDNSVRLWQIGC-EDCLGI-----FSHNNYVTSVQFN 405
Query: 257 S-DGNYALSGSWDKTLRLW 310
D ++ +SGS D +R+W
Sbjct: 406 PVDDDHFISGSIDGKVRIW 424
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 80 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 181
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 32.3 bits (70), Expect = 0.27
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +2
Query: 74 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 181
R H+G+VT++ + +++SSS DKTL +W L +
Sbjct: 451 RAHDGYVTKLVAPESH--LLVSSSLDKTLRIWDLRK 484
Score = 30.7 bits (66), Expect = 0.83
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 224 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF 343
H +++ +V + + + +S S DKTLR+WDL T + F
Sbjct: 453 HDGYVTKLV-APESHLLVSSSLDKTLRIWDLRKSWTPQPF 491
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 32.3 bits (70), Expect = 0.27
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 242 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKV 361
+ + DG Y LSGS D TL W++ R+E++ V
Sbjct: 249 EATFTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGV 288
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 119 YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY-GHSHFISDVVLSSDGNYALSGSWDK 295
+P ++ SSR + R + Y R + GH + + +S + +SGS D+
Sbjct: 77 HPSSLICSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDR 136
Query: 296 TLRLWDL 316
++RLWDL
Sbjct: 137 SVRLWDL 143
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 32.3 bits (70), Expect = 0.27
Identities = 21/85 (24%), Positives = 39/85 (45%)
Frame = +2
Query: 98 QIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYAL 277
++ T P + M+ SS K + ++ R+ N+ + K H+ +S + L +
Sbjct: 200 RVGTLPTFKSMVKSSVNPKHFM--EVRRNRNS--VKTK----HNDAVSSLSLDVELGLLY 251
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDH 352
S SWD T+++W +A K H
Sbjct: 252 SSSWDTTIKVWRIADSKCLESIHAH 276
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 32.3 bits (70), Expect = 0.27
Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Frame = +2
Query: 8 GXSSLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 187
G L+ P S S + L H G V + N K P+ + S + D T+ +W L
Sbjct: 90 GNIGLWNPISSESGEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDLA--- 146
Query: 188 NNYGIPQKRLYGHSHFISDVVLSSDGNYAL-----SGSWDKTLRLWDL 316
N P L G ++ + S N S S + T +WD+
Sbjct: 147 -NPSKPSHYLKGTGSYMQSEISSLSWNKGFQHVLASTSHNGTTVIWDV 193
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 31.9 bits (69), Expect = 0.36
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 203 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
P L GH+ +S V G +G+ D L+LW + G+ R +E H
Sbjct: 105 PALTLQGHTKTVSYVRFLDGGTVVTAGT-DGCLKLWSVEDGRVIRTYEGH 153
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 31.9 bits (69), Expect = 0.36
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 209 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 346
K+L H ++ V ++DG+ LSGS D+ + LWD F+
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFD 94
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 31.9 bits (69), Expect = 0.36
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +2
Query: 215 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 316
L GH++ + + +S DG ++G+ D+TLR W++
Sbjct: 461 LTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
Score = 31.5 bits (68), Expect = 0.47
Identities = 23/96 (23%), Positives = 43/96 (44%)
Frame = +2
Query: 68 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 247
T+ GH V +A ++ S SRDK+++ + E++ +L GH + +
Sbjct: 289 TMEGHRLRVGALAWGSS---VLSSGSRDKSILQRDIRCQEDHVS----KLAGHKSEVCGL 341
Query: 248 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
S D SG D L +W+ + + ++ +HT
Sbjct: 342 KWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHT 377
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 31.5 bits (68), Expect = 0.47
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 224 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
H+ +S + L+ + S SWD+T+++W +A K H
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAH 247
Score = 30.3 bits (65), Expect = 1.1
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 9/113 (7%)
Frame = +2
Query: 8 GXSSLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 187
G S F + + L G L+GH V + ++ S S DKT+ VWK RD
Sbjct: 313 GSSDGLVNFWEREKQLNYGGILKGHKLAVLCLEVAGS---LVFSGSADKTICVWK--RDG 367
Query: 188 NNYGIPQKRLYGHSHFISDVVLSSDGN---------YALSGSWDKTLRLWDLA 319
N + L GH+ + + + +D SGS DK++++W ++
Sbjct: 368 NIHTC-LSVLTGHTGPVKCLAVEADREASERRDKKWIVYSGSLDKSVKVWGVS 419
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 128 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 307
++ S+S D+T+ VW++ + IP H ++ VV +++ SGS D T++
Sbjct: 220 LLYSASWDRTIKVWRIADSKCLESIP-----AHDDAVNSVVSTTEA-IVFSGSADGTVKA 273
Query: 308 W 310
W
Sbjct: 274 W 274
Score = 27.5 bits (58), Expect = 7.7
Identities = 25/84 (29%), Positives = 37/84 (44%)
Frame = +2
Query: 59 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFI 238
L TL VT +A + + SS D + W+ + N GI L GH +
Sbjct: 287 LMQTLTKQESAVTALAVSKNGAAVYFGSS-DGLVNFWEREKQLNYGGI----LKGHK--L 339
Query: 239 SDVVLSSDGNYALSGSWDKTLRLW 310
+ + L G+ SGS DKT+ +W
Sbjct: 340 AVLCLEVAGSLVFSGSADKTICVW 363
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 31.5 bits (68), Expect = 0.47
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 212 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 334
R H ++ + ++DG Y LS +RLWD+ +G+ T
Sbjct: 307 RATAHYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRNT 347
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 31.1 bits (67), Expect = 0.63
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 110 NPKYPDMILSSSRDKTLIVW---KLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALS 280
NP P+++LS D +W KL + + + KR+ ++F S G L+
Sbjct: 321 NPVQPELLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYF-----SPSSGTKILT 375
Query: 281 GSWDKTLRLWDLAAG 325
D +R+WD G
Sbjct: 376 TCQDNRIRIWDSIFG 390
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 31.1 bits (67), Expect = 0.63
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +2
Query: 221 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTR----RFEDHT 355
GH+ + + S G SG D + +WD LA+ TR RFE+HT
Sbjct: 234 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHT 284
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 200 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL--AAGKTTRR 340
+ L GH+ + + S DG S + D+TLRLW++ KTT++
Sbjct: 363 VKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKK 411
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 31.1 bits (67), Expect = 0.63
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 209 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF 343
K+L H ++ V +++G+ +SGS D+ + LWD G F
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSF 97
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 31.1 bits (67), Expect = 0.63
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
NY S +D ++LWD+ G+ F +H K
Sbjct: 767 NYLASSDYDGIVKLWDVTTGQAISHFIEHEK 797
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 31.1 bits (67), Expect = 0.63
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +2
Query: 209 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
KRL+ H S L+ SGSWDKTL++W L+ K + H
Sbjct: 167 KRLW-IEHADSISCLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAH 213
Score = 27.5 bits (58), Expect = 7.7
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +2
Query: 47 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 226
E +L RGHN V + +M+ S S DK++ +W+ R+ ++GH
Sbjct: 306 EEWRLGFETRGHNMAVLCMCV---VGEMVCSGSADKSIGLWR--REVTGMLCKFGVIHGH 360
Query: 227 SHFISDVVLSSD----GNYALSGSWDKTLRLW 310
+ + S + G SG DK+LR+W
Sbjct: 361 EGPVKCLQASPNNVGAGFMLYSGGLDKSLRVW 392
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 31.1 bits (67), Expect = 0.63
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +2
Query: 170 KLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 340
K+ R + N G + L H + V S ++GSWDKT++ WD T R
Sbjct: 79 KVRRIDFNAG-KEDVLGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWDPRGASGTER 134
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 236 ISDVVLSSDGNYALSGSWDKTLRLWD 313
IS++ S++ ++ L SWDK++RL+D
Sbjct: 19 ISNLRFSNNSDHLLVSSWDKSVRLYD 44
>At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 500
Score = 31.1 bits (67), Expect = 0.63
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 236 ISDVVLSSDGNYALSGSWDKTLRLWDL 316
ISD+ S DG Y LS + TL+LWD+
Sbjct: 332 ISDIKFSKDGRYILSRDY-MTLKLWDI 357
>At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 501
Score = 31.1 bits (67), Expect = 0.63
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 236 ISDVVLSSDGNYALSGSWDKTLRLWDL 316
ISD+ S DG Y LS + TL+LWD+
Sbjct: 333 ISDIKFSKDGRYILSRDY-MTLKLWDI 358
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 30.7 bits (66), Expect = 0.83
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 215 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 316
L GHS + + S DG ++G+ D+TLR W++
Sbjct: 424 LTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/96 (22%), Positives = 44/96 (45%)
Frame = +2
Query: 68 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 247
T+ GH +A N + ++ S SRD+ ++ + R ++++ +L GH + +
Sbjct: 252 TMGGHQTRTGVLAWNSR---ILSSGSRDRNILQHDI-RVQSDF---VSKLVGHKSEVCGL 304
Query: 248 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 355
S D SG D L +W+ + + + +HT
Sbjct: 305 KWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHT 340
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 30.7 bits (66), Expect = 0.83
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 203 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 313
P L GH H + DV + +GS D LR+WD
Sbjct: 9 PVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWD 45
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 30.7 bits (66), Expect = 0.83
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 212 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 316
RL GH I +V S DG+ +S S D++ R+W++
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEI 264
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 30.7 bits (66), Expect = 0.83
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 212 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 316
RL GH I +V S DG+ +S S D++ R+W++
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEI 264
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 30.7 bits (66), Expect = 0.83
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Frame = +2
Query: 20 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--N 193
L KP S+ S L+G+ G ++ I+ N K ++ S+S + T ++W L + + N
Sbjct: 152 LLKP-SEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIIN 210
Query: 194 YGIPQKR----LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTK 358
+ +R L + + + ++++SD + + TL+LWD+ R F H +
Sbjct: 211 FADSVRRRCSVLQWNPNVTTQIMVASDDDSS------PTLKLWDMRNIMSPVREFTGHQR 264
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 30.7 bits (66), Expect = 0.83
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Frame = +2
Query: 20 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--N 193
L KP S+ S L+G+ G ++ I+ N K ++ S+S + T ++W L + + N
Sbjct: 152 LLKP-SEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIIN 210
Query: 194 YGIPQKR----LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTK 358
+ +R L + + + ++++SD + + TL+LWD+ R F H +
Sbjct: 211 FADSVRRRCSVLQWNPNVTTQIMVASDDDSS------PTLKLWDMRNIMSPVREFTGHQR 264
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 30.7 bits (66), Expect = 0.83
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 212 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG 325
+L GH ++ V +S G+ +SGS D+ + LW+ +G
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSG 87
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 30.7 bits (66), Expect = 0.83
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 224 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 340
H +S V +++D +GS+D T+ +WD+ +T +
Sbjct: 1045 HKDVVSCVAVTADSTILATGSYDTTVMVWDILRMRTPEK 1083
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 30.7 bits (66), Expect = 0.83
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 224 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
HS +S + L+ D S SWD+T+++W + K + H
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAH 176
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +2
Query: 119 YPDMILSSSR---DKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSW 289
+P ++ SSR D +L + L+ +N Y + GH + + L S G +SGS
Sbjct: 86 HPTTVIYSSRNGWDDSLRL--LSLHDNKY---LRYFKGHHDRVVSLSLCSGGECFISGSL 140
Query: 290 DKTLRLWD 313
D+T+ LWD
Sbjct: 141 DRTVLLWD 148
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +2
Query: 119 YPDMILSSSR---DKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSW 289
+P ++ SSR D +L + L+ +N Y + GH + + L S G +SGS
Sbjct: 83 HPTTVIYSSRNGWDDSLRL--LSLHDNKY---LRYFKGHHDRVVSLSLCSGGECFISGSL 137
Query: 290 DKTLRLWD 313
D+T+ LWD
Sbjct: 138 DRTVLLWD 145
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
N S S DK +++WD+A G E HTK
Sbjct: 279 NILASASADKKVKVWDVATGTCKITMEHHTK 309
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 59 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 223
LR RGH+ VT +A + ++ S S D + VWK++ E + G Q ++ G
Sbjct: 213 LRSLFRGHSQRVTDMAFFAEDVHLLASVSLDGKVFVWKIS--EGSEGDEQSQITG 265
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 30.3 bits (65), Expect = 1.1
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Frame = +2
Query: 35 SKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIV---WKL-----TRDEN 190
SK SE +++ GH VT + T + + +LS S+D+T V WK DE+
Sbjct: 399 SKESENWQMQKVPSGHFAAVTDV-TWARTGEYLLSVSQDQTTRVFSAWKNDEGNEAEDEH 457
Query: 191 NYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 313
+ + + +++GH +V + +SG+ +K +R+++
Sbjct: 458 WHELARPQVHGHDINCVAMVQGKGNHRFVSGAEEKVVRVFE 498
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 8/43 (18%)
Frame = +2
Query: 71 LRGHNGWVTQIA------TNPKYPD--MILSSSRDKTLIVWKL 175
L+GH W+ + T + P+ M++SSS+DK + +WKL
Sbjct: 219 LKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIWKL 261
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 56 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRD 184
KL + H + + NP + +SSRDKT+ +W + D
Sbjct: 687 KLMAKVEAHKRIIWACSWNP-FGHQFATSSRDKTVKIWSVEND 728
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 236 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF 343
IS++ S++ ++ L SWDK +RL+D++ F
Sbjct: 20 ISNLRFSNNSDHLLVSSWDKRVRLYDVSTNSLKGEF 55
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 224 HSHFISDVVLSSDGNYALSGSWDKTLRLWD 313
H + V S ++GSWDKT++ WD
Sbjct: 97 HDKAVRCVEYSYAAGQVITGSWDKTVKCWD 126
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 29.9 bits (64), Expect = 1.4
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 68 TLRGHNGWVTQIATNPKYPDM--ILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHSHFI 238
T+ GH+ V+ + K+ D ++SSS D TL +W L+ + P GH++
Sbjct: 699 TMIGHSKTVSYV----KFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLK 754
Query: 239 SDVVLSSDGNYALSGS 286
+ V LS Y +GS
Sbjct: 755 NFVGLSVSDGYIATGS 770
>At2g35860.1 68415.m04403 beta-Ig-H3 domain-containing protein /
fasciclin domain-containing protein contains Pfam
profile PF02469: Fasciclin domain
Length = 445
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = -2
Query: 533 IYNTIIILPSYLRLLQH--KHNLLPRKGTK-HWSSASHRHLGLSSVHNQHLH 387
++ + ++ P L+ LQ ++LP++ T W S SH H LS N HLH
Sbjct: 90 LFKSFLLEPRNLKSLQSLLMFHILPKRITSPQWPSLSHHHRTLS---NDHLH 138
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 29.9 bits (64), Expect = 1.4
Identities = 26/92 (28%), Positives = 39/92 (42%)
Frame = +2
Query: 56 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 235
K + R H+ +V I +P I SS K +I T D+ + GH
Sbjct: 42 KFHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASED---GHKGS 98
Query: 236 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKT 331
I V S D L+ S DK+ ++W++A T
Sbjct: 99 IYAVSWSPDSKRVLTVSADKSAKVWEVAEDGT 130
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 200 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL--AAGKTTRR 340
+ L GH+ + + S DG S + D+TLRLW++ KTT++
Sbjct: 346 VKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKK 394
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Frame = +2
Query: 221 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD---LAAGKTTR----RFEDHT 355
GH+ + + S G SG D + +WD +A+ TR RFE+HT
Sbjct: 216 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHT 267
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 29.5 bits (63), Expect = 1.9
Identities = 22/84 (26%), Positives = 32/84 (38%)
Frame = +2
Query: 62 RGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS 241
RG GH V +A P S D L++W + +K H +
Sbjct: 274 RGIYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVD 333
Query: 242 DVVLSSDGNYALSGSWDKTLRLWD 313
D N L+GS D T+R++D
Sbjct: 334 --WNPHDNNLILTGSADNTVRVFD 355
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Frame = +2
Query: 80 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY---GIPQKR----LYGHSHFI 238
H G V +I P+ ++ + + +++W + Y G P R L GH
Sbjct: 152 HPGEVNRIRELPQNSKIVATHTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDA 211
Query: 239 S-DVVLSSDGNYALSGSWDKTLRLWDL 316
+ + + LSG DK++ LW++
Sbjct: 212 EFALAMCPTEPFVLSGGKDKSVILWNI 238
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +2
Query: 44 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT-----RDENNYGIPQ 208
S L+L +L H V + + Y MI SSS D T+I+W L+ R N+ +P
Sbjct: 3311 SRRLRLEKSLCAHTAKVICLRVSQPYM-MIASSSDDCTVIIWDLSSLSFVRQLPNFSVPV 3369
Query: 209 KRLY 220
+Y
Sbjct: 3370 TVVY 3373
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +2
Query: 236 ISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTRRFED 349
+ ++V S +G Y L+ S D+T+R+++ L A + ED
Sbjct: 219 VKNIVFSRNGQYLLTNSHDRTIRIYENLLPAKNVLKSLED 258
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 29.5 bits (63), Expect = 1.9
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = +2
Query: 137 SSSRD-KTLIVWKLTRDENNYGIPQKR-----LYGHSHFISDVVLSS-DGNYALSGSWDK 295
S SRD K L+ L+ + +PQ L GH ++DVV SS D + S D+
Sbjct: 70 SLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDR 129
Query: 296 TLRLW 310
T ++W
Sbjct: 130 TEKIW 134
Score = 29.5 bits (63), Expect = 1.9
Identities = 23/64 (35%), Positives = 27/64 (42%)
Frame = +2
Query: 137 SSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 316
SS D VW L R N I Q GH + V S +G + SG D R+WDL
Sbjct: 147 SSGFDSLARVWDL-RTARNILIFQ----GHIKQVLSVDFSPNGYHLASGGEDNQCRIWDL 201
Query: 317 AAGK 328
K
Sbjct: 202 RMRK 205
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 29.5 bits (63), Expect = 1.9
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Frame = +2
Query: 77 GHNGWVTQIATNPKYPD--MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
GH+ V +A +P PD ++S+S+D + L E I GH +
Sbjct: 9 GHSRPVVDVAYSPVTPDGFFLISASKDSNPM---LRNGETGDWIGT--FEGHKGAVWSCS 63
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 346
L + A S S D T ++W+ G FE
Sbjct: 64 LDKNAIRAASASADFTAKIWNALTGDELHSFE 95
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/77 (23%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +2
Query: 128 MILSSSRDKTLIVWKLTRDENNYGIP---QKRLYGHSHFISDVVLSSDGNYALSGSWDKT 298
++++ + D + VW++++D +K L H+ ++ + +S SGS D T
Sbjct: 3344 IVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASGSDDCT 3403
Query: 299 LRLWDLAAGKTTRRFED 349
+ +WDL++ R+ D
Sbjct: 3404 VIIWDLSSLSFVRQLPD 3420
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +2
Query: 221 GHSHFISDVVLS---SDGNYALSGSWDKTLRLWD 313
GH+ +S V S G + +SG DKT+++WD
Sbjct: 246 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 279
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +2
Query: 221 GHSHFISDVVLS---SDGNYALSGSWDKTLRLWD 313
GH+ +S V S G + +SG DKT+++WD
Sbjct: 272 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 305
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/41 (26%), Positives = 25/41 (60%)
Frame = +2
Query: 206 QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 328
++ L GH ++ + +S+G+ +SGS D + +W+ ++ K
Sbjct: 43 EQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRK 83
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 29.1 bits (62), Expect = 2.5
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Frame = +2
Query: 20 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG 199
L +P + L+ G G ++ +A +P M+ S +T +++ E Y
Sbjct: 191 LHRPGRDFRQYSTLQKNKEGQAGILSTLAFSPTNSGMLAVGSYGQTTGIYREDNMELLYV 250
Query: 200 IPQKRLYGHSHFISDVVLSSDGNYALSGS-WDKTLRLWDL 316
L+G ++ V S DGNY +G D + WD+
Sbjct: 251 -----LHGQEGGVTHVQFSKDGNYLYTGGRKDPYILCWDI 285
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 221 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA 319
GH I V S DG L+ S DK+ ++WD++
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDIS 262
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 221 GHSHFISDV-VLSSDGNYALSGSWDKTLRLWDLAAG 325
GH +S + VL + +Y LSGS+D + W L G
Sbjct: 322 GHMKNVSSLAVLKGNADYILSGSYDGLICKWMLGRG 357
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 224 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 328
HS ++ + SSDG Y SG + L +W L GK
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGK 316
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDH 352
+SGS D T+R+WDL +G H
Sbjct: 553 ISGSMDCTIRIWDLESGNVIMIMHHH 578
>At2g43945.1 68415.m05462 expressed protein
Length = 289
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = -3
Query: 418 DYLQCIISIYTLTKLRVLSHLSMVLESSGSLACSEI 311
D+++C++ + LR+ + ++E SGS+A SE+
Sbjct: 91 DHIECVLESDEDSGLRIPTQAQAIVEGSGSVAVSEL 126
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 28.7 bits (61), Expect = 3.3
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +2
Query: 68 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHSHFISD 244
T+ GH+ V+ + ++SSS D TL +W L+ + P GH++ +
Sbjct: 657 TMIGHHKTVSYVRFVDS--STLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNF 714
Query: 245 VVLSSDGNYALSGS 286
V LS Y +GS
Sbjct: 715 VGLSVSDGYIATGS 728
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 28.7 bits (61), Expect = 3.3
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +2
Query: 68 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHSHFISD 244
T+ GH+ V+ + ++SSS D TL +W L+ + P GH++ +
Sbjct: 657 TMIGHHKTVSYVRFVDS--STLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNF 714
Query: 245 VVLSSDGNYALSGS 286
V LS Y +GS
Sbjct: 715 VGLSVSDGYIATGS 728
>At5g60050.1 68418.m07530 PRLI-interacting factor-related contains
weak similarity to PRLI-interacting factor G
(GI:11139264) [Arabidopsis thaliana]
Length = 499
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 146 RDKTLIVWKLTRDENNYGIPQKRLYGHSH 232
R+ ++++KL R+E +Y + + LYG H
Sbjct: 271 REMKVLIFKLVREEADYDVSRDTLYGLCH 299
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 191 NYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 316
N G + L GH F DG +G+ DKT R+WD+
Sbjct: 307 NTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDI 348
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 290 DKTLRLWDLAAGKTTRRFEDH 352
DKT+++WD A G FE H
Sbjct: 485 DKTIKVWDAATGVKRHTFEGH 505
Score = 27.9 bits (59), Expect = 5.8
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +2
Query: 50 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 229
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 865 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 919
Query: 230 HFISDVVLSSDGNYALSGSWDKTLRLWD 313
I+ + S+ N +S D L +W+
Sbjct: 920 KRITGLAFSNVLNVLVSSGADAQLCVWN 947
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 290 DKTLRLWDLAAGKTTRRFEDH 352
DKT+++WD A G FE H
Sbjct: 485 DKTIKVWDAATGVKRHTFEGH 505
Score = 27.9 bits (59), Expect = 5.8
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +2
Query: 50 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 229
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 865 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 919
Query: 230 HFISDVVLSSDGNYALSGSWDKTLRLWD 313
I+ + S+ N +S D L +W+
Sbjct: 920 KRITGLAFSNVLNVLVSSGADAQLCVWN 947
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/81 (20%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 74 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 253
+GH+ + + + P+++ + S D W + + + Q H+ + +
Sbjct: 160 KGHDFELWTASFDLNNPNLVYTGSDDCKFSCWDIRDSPADNRVFQNSKV-HTMGVCCISS 218
Query: 254 SSDGNYAL-SGSWDKTLRLWD 313
+ Y++ +GS+D+TLR+WD
Sbjct: 219 NPSDPYSIFTGSYDETLRVWD 239
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 27.9 bits (59), Expect = 5.8
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Frame = +2
Query: 77 GHNGWVTQIATNPKYPD--MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
GH+ V + +P PD ++S+S+D + L E I GH +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSQPM---LRNGETGDWIGT--FEGHKGAVWSSC 68
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 346
L ++ A S S D + +LWD G FE
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFE 100
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 27.9 bits (59), Expect = 5.8
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +2
Query: 50 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 229
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 854 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 908
Query: 230 HFISDVVLSSDGNYALSGSWDKTLRLWD 313
I+ + S+ N +S D L +W+
Sbjct: 909 KRITGLAFSNVLNVLVSSGADAQLCVWN 936
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 290 DKTLRLWDLAAGKTTRRFEDH 352
DKT+++WD A G FE H
Sbjct: 485 DKTIKVWDAATGVKRYTFEGH 505
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 27.9 bits (59), Expect = 5.8
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +2
Query: 50 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 229
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 854 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 908
Query: 230 HFISDVVLSSDGNYALSGSWDKTLRLWD 313
I+ + S+ N +S D L +W+
Sbjct: 909 KRITGLAFSNVLNVLVSSGADAQLCVWN 936
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 290 DKTLRLWDLAAGKTTRRFEDH 352
DKT+++WD A G FE H
Sbjct: 485 DKTIKVWDAATGVKRYTFEGH 505
>At4g03970.1 68417.m00561 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At5g28170, At1g35110,
At1g44880, At3g42530, At4g19320, At5g36020, At3g43010,
At2g10350
Length = 1043
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 113 PKYPDMILSSSRDKTLIVWK-LTRDENNYGIPQ 208
P D++L S KT+++WK LT + +PQ
Sbjct: 220 PGLLDLVLDDSTSKTILLWKRLTHPKQVISLPQ 252
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 290 DKTLRLWDLAAGKTTRRFEDH 352
DKT+++WD G FE H
Sbjct: 487 DKTIKVWDAVTGNKLHTFEGH 507
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 290 DKTLRLWDLAAGKTTRRFEDH 352
DKT+++WD G FE H
Sbjct: 487 DKTIKVWDAVTGNKLHTFEGH 507
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
NY S +D +++WD G+ ++ +H K
Sbjct: 779 NYLASTDYDGVVQIWDAGTGQGFSQYTEHQK 809
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +2
Query: 191 NYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 316
N G L GH F DG +G+ DKT R+WD+
Sbjct: 305 NTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDI 346
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 27.5 bits (58), Expect = 7.7
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Frame = +2
Query: 77 GHNGWVTQIATNPKYPD--MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
GH+ V + +P PD ++S+S+D + L E I GH +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSHPM---LRNGETGDWIGT--FEGHKGAVWSSC 68
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 346
L ++ A S S D + +LWD G FE
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFE 100
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 27.5 bits (58), Expect = 7.7
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Frame = +2
Query: 77 GHNGWVTQIATNPKYPD--MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 250
GH+ V + +P PD ++S+S+D + L E I GH +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSHPM---LRNGETGDWIGT--FEGHKGAVWSSC 68
Query: 251 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 346
L ++ A S S D + +LWD G FE
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFE 100
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,879,633
Number of Sequences: 28952
Number of extensions: 258902
Number of successful extensions: 1330
Number of sequences better than 10.0: 198
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -