Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10a09r
(707 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g43370.1 68418.m05301 inorganic phosphate transporter (PHT2) ... 32 0.43
At5g43350.1 68418.m05299 inorganic phosphate transporter (PHT1) ... 31 0.57
At4g30420.1 68417.m04321 nodulin MtN21 family protein similar to... 31 0.57
At3g13050.1 68416.m01626 transporter-related low similarity to a... 31 0.75
At1g79360.1 68414.m09248 transporter-related low similarity to S... 31 0.75
At2g20780.1 68415.m02442 mannitol transporter, putative similar ... 29 3.0
At5g41190.1 68418.m05006 expressed protein ; expression support... 28 5.3
At3g45850.1 68416.m04962 kinesin motor protein-related kinesin-r... 28 5.3
At4g11200.1 68417.m01813 hypothetical protein contains weak hit ... 28 7.0
At1g76430.1 68414.m08885 phosphate transporter family protein si... 28 7.0
At4g37510.1 68417.m05307 ribonuclease III family protein contain... 27 9.2
>At5g43370.1 68418.m05301 inorganic phosphate transporter (PHT2)
identical to inorganic phosphate transporter
[Arabidopsis thaliana] GI:2780348
Length = 524
Score = 31.9 bits (69), Expect = 0.43
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 461 FCVLVDLFPTNLRVMAAALSLTAGRGGGLIGNLSFGY 351
F V ++FP LR +S AG+ G +IG F Y
Sbjct: 425 FIVPAEIFPARLRSTCHGISAAAGKAGAIIGAFGFLY 461
>At5g43350.1 68418.m05299 inorganic phosphate transporter (PHT1)
(PT1) identical to inorganic phosphate transporter
[Arabidopsis thaliana] GI:2258116
Length = 524
Score = 31.5 bits (68), Expect = 0.57
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 461 FCVLVDLFPTNLRVMAAALSLTAGRGGGLIGNLSFGY 351
F V ++FP LR +S AG+ G ++G F Y
Sbjct: 425 FIVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLY 461
>At4g30420.1 68417.m04321 nodulin MtN21 family protein similar to
MtN21 [Medicago truncatula] GI:2598575; contains Pfam
profile PF00892: Integral membrane protein
Length = 373
Score = 31.5 bits (68), Expect = 0.57
Identities = 20/84 (23%), Positives = 37/84 (44%)
Frame = -1
Query: 614 VHKLGAKFFLIFSLSFAGVVTVGLYYVQNSIQNLVLSCIFEALTSLAISLVFCVLVDLFP 435
VH L + F+++ +FA + Y+ + +S +L + SL+F V +
Sbjct: 22 VHGLSPRVFILYRQAFATIFIFPFLYLSRRKSKIAIS----SLDLKSFSLIFLVSLIGIT 77
Query: 434 TNLRVMAAALSLTAGRGGGLIGNL 363
N + L LT+ G +GN+
Sbjct: 78 INQNLYLEGLYLTSSSMGSAVGNI 101
>At3g13050.1 68416.m01626 transporter-related low similarity to
apical organic cation transporter [Sus scrofa]
GI:2062135, SP|Q02563 Synaptic vesicle protein 2 (SV2)
{Rattus norvegicus}; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 500
Score = 31.1 bits (67), Expect = 0.75
Identities = 24/102 (23%), Positives = 40/102 (39%)
Frame = -1
Query: 677 YMHTLIVGLACIPTSLWLPLCVHKLGAKFFLIFSLSFAGVVTVGLYYVQNSIQNLVLSCI 498
Y I A P L V +LG K + L + + L Q+ VL
Sbjct: 340 YRDVFIASFAEFPGLLISAAMVDRLGRKASMASMLFTCCIFLLPLLSHQSPFITTVLLFG 399
Query: 497 FEALTSLAISLVFCVLVDLFPTNLRVMAAALSLTAGRGGGLI 372
S A ++V+ +++PT +R + + GR GG++
Sbjct: 400 GRICISAAFTVVYIYAPEIYPTAVRTTGVGVGSSVGRIGGIL 441
>At1g79360.1 68414.m09248 transporter-related low similarity to
SP|O76082 Organic cation/carnitine transporter 2 (Solute
carrier family 22, member 5) (High-affinity
sodium-dependent carnitine cotransporter) {Homo
sapiens}; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 527
Score = 31.1 bits (67), Expect = 0.75
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Frame = -1
Query: 692 IDQSVYMHTLIVGLACIPTSLWLPLCVHKLGAKFFLIFSLSFAGVVTVGLYYVQNS-IQN 516
+D ++Y+ L +P +L V KL + LI + GV +V ++ + N I N
Sbjct: 351 LDFNIYLSAAFNALMDLPANLITLFLVDKLSRRNALIGFTALGGVSSVLIFALHNMRIGN 410
Query: 515 -------LVLSCIFEALTSLAISLVFCVLVDLFPTNLRVMAAALSLTAGRGGGL 375
L L F A ++ + +++ + +LFPT +R A A++ A GG+
Sbjct: 411 HGALQLALELISYFSACSAFNMEMIYTI--ELFPTCVRNSAIAMARQALVLGGV 462
>At2g20780.1 68415.m02442 mannitol transporter, putative similar to
mannitol transporter [Apium graveolens var. dulce]
GI:12004316; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 526
Score = 29.1 bits (62), Expect = 3.0
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -1
Query: 593 FFLIFSLSFAGVVTVGLYYVQNSIQNLVLSCIFEALTSLAISLVFCVLV-DLFPTNLRVM 417
F L F+L+F G T+G+ L+ C A S+ + V VL ++FP LR
Sbjct: 381 FCLSFTLTFLGQGTLGITLA------LLFVCGNVAFFSIGMGPVCWVLTSEIFPLRLRAQ 434
Query: 416 AAALSLTAGR 387
A+AL R
Sbjct: 435 ASALGAVGNR 444
>At5g41190.1 68418.m05006 expressed protein ; expression supported
by MPSS
Length = 602
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 379 PPPRPAVSDNAAAITLRFVGN-RSTSTQNTRLMASEVRASKIQDSTKFWMEFCT 537
PP +P V+D A A L VGN +ST + ++ + Q T F +F T
Sbjct: 17 PPSKPPVNDGAPAAILGMVGNCKSTKGISIAVVDANAIIEGRQSLTNFADKFVT 70
>At3g45850.1 68416.m04962 kinesin motor protein-related
kinesin-related protein TKRP125, Nicotiana tabacum,
PIR:T02017
Length = 1058
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +3
Query: 12 TQVNTKILLCS---FFLKFNKKHRILYHTVNGNKCVRDE 119
T+VN+ I+ C LK + H+I+ T N KC+ DE
Sbjct: 935 TKVNSMIIPCCEDLIELKSDHNHKIIEITENAGKCLLDE 973
>At4g11200.1 68417.m01813 hypothetical protein contains weak hit to
Pfam profile PF03108: MuDR family transposase
Length = 462
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 540 VQTDCHHSGETQTEN 584
V+ CHHSGE +TEN
Sbjct: 116 VRVKCHHSGEFKTEN 130
>At1g76430.1 68414.m08885 phosphate transporter family protein
similar to phosphate transporters from [Catharanthus
roseus] GI:2208908 and [Nicotiana tabacum] GI:12641853,
transmembrane protein [Solanum tuberosum] GI:17065936;
contains Pfam profile: PF00083 major facilitator
superfamily protein
Length = 532
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -1
Query: 461 FCVLVDLFPTNLRVMAAALSLTAGRGGGLIGNLSF 357
F + +LFP R +S AG+ G ++G + F
Sbjct: 425 FIIPAELFPARFRSTCHGISGAAGKFGAIVGTVGF 459
>At4g37510.1 68417.m05307 ribonuclease III family protein contains
Pfam profile PF00636 RNase3 domain
Length = 537
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +1
Query: 355 PNERFPIRPPPRPAVSDNAAAITLRFVGNRSTSTQNTRLMASEVRASKIQDSTKFWME 528
P +RF +RPP + D A RF+ + S ++ L++S + +SK+ ++ K W++
Sbjct: 87 PPKRFILRPP----LDDKKLAE--RFLNSPQLSLKSFPLLSSCLPSSKLNNADKTWID 138
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,687,191
Number of Sequences: 28952
Number of extensions: 294761
Number of successful extensions: 858
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1526202912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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