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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_B03
         (908 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g26820.1 68416.m03355 esterase/lipase/thioesterase family pro...    33   0.35 
At4g26600.1 68417.m03834 nucleolar protein, putative similar to ...    32   0.46 
At5g46190.1 68418.m05681 KH domain-containing protein strong sim...    31   1.1  
At4g04960.1 68417.m00721 lectin protein kinase, putative similar...    31   1.4  
At5g55920.1 68418.m06975 nucleolar protein, putative similar to ...    30   2.4  
At5g57700.2 68418.m07213 BNR/Asp-box repeat family protein conta...    29   3.2  
At5g57700.1 68418.m07212 BNR/Asp-box repeat family protein conta...    29   3.2  
At1g15530.1 68414.m01868 receptor lectin kinase, putative simila...    29   5.6  
At1g17240.1 68414.m02100 leucine-rich repeat family protein cont...    28   7.4  
At4g15560.1 68417.m02377 1-deoxy-D-xylulose 5-phosphate synthase...    28   9.8  
At3g50860.1 68416.m05569 clathrin adaptor complex small chain fa...    28   9.8  

>At3g26820.1 68416.m03355 esterase/lipase/thioesterase family
           protein contains Interpro entry IPR000379
          Length = 634

 Score = 32.7 bits (71), Expect = 0.35
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
 Frame = +1

Query: 511 KLVWSPDCSFVVLA--YGNGVVGFFDLTASNLFNIPIECSRPEGLECSDNTHAVADVIFM 684
           KL W     FV +A  +G  +V F  +   ++FNI ++ +    +    +    A     
Sbjct: 472 KLFWPEQSEFVRVASKFGAKIVPFGVVGEDDIFNIVLDSNDQRNIPILKDLMEKATKDAG 531

Query: 685 PLRVKDTKWNWEVLIVTYDG 744
            LR K+TK NWE  I    G
Sbjct: 532 NLRWKETKANWETKIAIIPG 551


>At4g26600.1 68417.m03834 nucleolar protein, putative similar to
           SP|P46087 Proliferating-cell nucleolar antigen p120
           (Proliferation-associated nucleolar protein p120) {Homo
           sapiens}; contains Pfam profile PF01189: NOL1/NOP2/sun
           family
          Length = 671

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = +1

Query: 433 IRTKRSDYATIAARTTVNRDPYSQWRKL-VWSPDCSFVVLAYGNGVVGFFDLTASNLFNI 609
           ++T+R D A I     VN DP S+W K+ +   D    + A    + GF+ L +++ F +
Sbjct: 275 LKTRRRDLADILLNRGVNLDPLSKWSKVGLIVYDSQVPIGATPEYLAGFYMLQSASSF-L 333

Query: 610 PIECSRPEGLE 642
           P+    P   E
Sbjct: 334 PVMALAPREKE 344


>At5g46190.1 68418.m05681 KH domain-containing protein strong
           similarity to unknown protein (pir||T04533)
          Length = 644

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = +1

Query: 457 ATIAARTTVNRDPYSQWRKLVWSPDCSFVVLAYGNGVVGFFDLTASNLFNIPIECSRP 630
           AT A  T ++RD + + R LV S  CS V+   G+ +      T +N+  +  + S P
Sbjct: 136 ATAAENTKIDRDDFRECRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDP 193


>At4g04960.1 68417.m00721 lectin protein kinase, putative similar to
           receptor lectin kinase 3 [Arabidopsis thaliana]
           gi|4100060|gb|AAD00733; contains protein kinase domain,
           Pfam:PF00069; contains legume lectins alpha and beta
           domains, Pfam:PF00138 and Pfam:PF00139
          Length = 686

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 173 CRKRINQFSTNYTYIRNGNLNQNIFKN 253
           C+K +  F   Y Y+ NG+L++ IF+N
Sbjct: 411 CKKEVGSFMLVYDYMENGSLDRWIFEN 437


>At5g55920.1 68418.m06975 nucleolar protein, putative similar to
           SP|P46087 Proliferating-cell nucleolar antigen p120
           (Proliferation-associated nucleolar protein p120) {Homo
           sapiens}, SP|P40991 Nucleolar protein NOP2
           {Saccharomyces cerevisiae}; contains Pfam profile
           PF01189: NOL1/NOP2/sun family
          Length = 682

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = +1

Query: 433 IRTKRSDYATIAARTTVNRDPYSQWRKL-VWSPDCSFVVLAYGNGVVGFFDLTASNLFNI 609
           ++T+R D A +     VN DP S+W K+ +   D    + A    + G++ L  ++ F +
Sbjct: 292 LKTRRRDLADVLLNRGVNLDPLSKWSKVGLVIYDSQVPIGATPEYLAGYYMLQGASSF-L 350

Query: 610 PIECSRP 630
           P+    P
Sbjct: 351 PVMALAP 357


>At5g57700.2 68418.m07213 BNR/Asp-box repeat family protein contains
           Pfam PF02012: BNR/Asp-box repeat
          Length = 347

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 519 LESRLLLCGSSIWEWRSW 572
           LE   LLCGSS+  W SW
Sbjct: 140 LEDGTLLCGSSVESWNSW 157


>At5g57700.1 68418.m07212 BNR/Asp-box repeat family protein contains
           Pfam PF02012: BNR/Asp-box repeat
          Length = 352

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 519 LESRLLLCGSSIWEWRSW 572
           LE   LLCGSS+  W SW
Sbjct: 145 LEDGTLLCGSSVESWNSW 162


>At1g15530.1 68414.m01868 receptor lectin kinase, putative similar
           to receptor lectin kinase 3 [Arabidopsis thaliana]
           gi|4100060|gb|AAD00733; contains pfam domains PF00139:
           Legume lectins beta domain and PF00069: Protein kinase
           domain
          Length = 656

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +2

Query: 173 CRKRINQFSTNYTYIRNGNLNQNIFKN 253
           CR++ N+    Y Y+ NG+LNQ IF N
Sbjct: 424 CRRK-NELMLVYDYMPNGSLNQWIFDN 449


>At1g17240.1 68414.m02100 leucine-rich repeat family protein
           contains leucine rich-repeat (LRR) domains Pfam:PF00560,
           INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon
           esculentum] gi|3894387|gb|AAC78593
          Length = 729

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +1

Query: 601 FNIPIECSRPEGLECSDNTHAVADVIFMPLR 693
           +N+ I+C   EG+ C D++ +   VI +P R
Sbjct: 70  WNLSIDCCSWEGITCDDSSDSHVTVISLPSR 100


>At4g15560.1 68417.m02377 1-deoxy-D-xylulose 5-phosphate synthase,
           putative / 1-deoxyxylulose-5-phosphate synthase,
           putative / DXP-synthase, putative (DEF) (CLA1) identical
           to SP|Q38854 Probable 1-deoxy-D-xylulose 5-phosphate
           synthase, chloroplast precursor (EC 4.1.3.37)
           (1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
           (DXPS). [Mouse-ear cress] {Arabidopsis thaliana}, DEF
           (deficient in photosynthesis) protein [Arabidopsis
           thaliana] GI:1399261
          Length = 717

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +1

Query: 658 HAVADVIFMPLRVKDTKWNWEVLIVTYDGKLRGYLVSQTEGFKIHHTFKF 807
           H + D++ +   VK T+    VLI     K RGY  ++    K H   KF
Sbjct: 335 HNIDDLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADDKYHGVVKF 384


>At3g50860.1 68416.m05569 clathrin adaptor complex small chain
           family protein contains Pfam profile: PF01217 clathrin
           adaptor complex small chain
          Length = 166

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +1

Query: 157 KIGLIMSEENKSILHELYVYSEWKPEPEYIQKPDNLLL--PENISSLWKWLKFFGPKKNL 330
           K  ++M+ + K  L + Y Y   + + E I+   ++L   PEN+S+  +    FGP   L
Sbjct: 3   KAVMMMNTQGKPRLAKFYDYLPVEKQQELIRGVFSVLCSRPENVSNFLEIESLFGPDSRL 62

Query: 331 I 333
           +
Sbjct: 63  V 63


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,810,473
Number of Sequences: 28952
Number of extensions: 405112
Number of successful extensions: 1052
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2149324008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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