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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0025
         (699 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g02110.1 68414.m00137 proline-rich family protein contains pr...    31   0.97 
At1g76965.1 68414.m08961 glycine-rich protein                          29   2.2  
At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to ...    29   3.9  
At5g42370.1 68418.m05159 expressed protein                             29   3.9  
At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identic...    29   3.9  
At2g25050.1 68415.m02996 formin homology 2 domain-containing pro...    29   3.9  
At5g37380.2 68418.m04492 DNAJ heat shock N-terminal domain-conta...    28   5.2  
At5g37380.1 68418.m04491 DNAJ heat shock N-terminal domain-conta...    28   5.2  
At5g11770.1 68418.m01374 NADH-ubiquinone oxidoreductase 20 kDa s...    28   5.2  
At1g72520.1 68414.m08386 lipoxygenase, putative similar to lipox...    28   5.2  
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea...    28   6.8  
At2g02800.2 68415.m00225 protein kinase (APK2b) identical to pro...    28   6.8  
At2g02800.1 68415.m00224 protein kinase (APK2b) identical to pro...    28   6.8  
At5g22390.1 68418.m02612 expressed protein                             27   9.0  

>At1g02110.1 68414.m00137 proline-rich family protein contains
           proline-rich domain, INTERPRO:IPR000694
          Length = 679

 Score = 30.7 bits (66), Expect = 0.97
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = -1

Query: 471 ITHEHRPDPAPVASASRPNPTRPGPQSQSLFRSYGSNLPTSLTY 340
           +   H P+P P    S+P PTRP      L  S  S+ P +  Y
Sbjct: 83  VPSSHSPEPPPPPIRSKPKPTRPRRLPHILSDSSPSSSPATSFY 126


>At1g76965.1 68414.m08961 glycine-rich protein 
          Length = 158

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 448 PGTGRIRFPSKPDTPRSSEPILIPKLRIQFAD 353
           PG   + FP KP+ P    P  +P+L + F D
Sbjct: 93  PGAAIVVFPKKPEEPVKVVPTPMPQLNLFFGD 124


>At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to
           autophagy 7 [Arabidopsis thaliana] GI:19912147; contains
           Pfam profile PF00899: ThiF family
          Length = 697

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = -3

Query: 235 PQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRR 101
           P  ++G    CG  +V NH++LL +S+ L+      ++S  +R +
Sbjct: 42  PISITGFYGPCGHPQVSNHLTLLSESLPLDEQSLIASTSHGNRNK 86


>At5g42370.1 68418.m05159 expressed protein
          Length = 447

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 174 PFYRIPWNSNAQAEKKTLPGPLGGVFRPL-WVTPSNTR 64
           P Y +  +   Q+ +K +P PL  + R L W TPS  R
Sbjct: 285 PLYDVTSSGLVQSVEKVVPRPLRSIVRLLFWYTPSTMR 322


>At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identical
           to low affinity calcium antiporter CAX2 (GI:1488267)
           [Arabidopsis thaliana]; Ca2+:Cation Antiporter (CaCA)
           Family member PMID:11500563
          Length = 441

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = +1

Query: 37  SIIVPSSLKTSVRRGNPKWPEDAAERSGKSFLFC--LSVRVPWNPI 168
           S++   SL TS  +  PK P+++   S K  +FC  L++ +P+ P+
Sbjct: 41  SLMEQGSLSTSFPQHTPKAPKNSVLNSIKIVIFCNKLNLLLPFGPL 86


>At2g25050.1 68415.m02996 formin homology 2 domain-containing
           protein / FH2 domain-containing protein contains formin
           homology 2 domain, Pfam:PF02128
          Length = 1111

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 23/74 (31%), Positives = 35/74 (47%)
 Frame = -1

Query: 483 AKTNITHEHRPDPAPVASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWR 304
           A+  +T    P   P+   SRP P  P P   SL RS  S   TS +   ++T+G  P  
Sbjct: 550 AEAAVTSSPLPPLKPLRILSRPPPPPPPPPISSL-RSTPSPSSTSNS---IATQGPPPPP 605

Query: 303 PAADMGTNRRDIST 262
           P   + ++R  +S+
Sbjct: 606 PPPPLQSHRSALSS 619


>At5g37380.2 68418.m04492 DNAJ heat shock N-terminal
           domain-containing protein similar to SP|Q9QYI4 DnaJ
           homolog subfamily B member 12 {Mus musculus}; contains
           Pfam profile PF00226: DnaJ domain
          Length = 431

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -2

Query: 488 NSLKRT*RTNIDQTRHRSHPLPVQTRHAPVLRANPYSEVTDP 363
           N  K T  TN   T  R++P P Q  + P  + NP ++ T+P
Sbjct: 150 NFAKTTFTTNARTTTPRNNP-PAQKTNPPAQKTNPPAQKTNP 190


>At5g37380.1 68418.m04491 DNAJ heat shock N-terminal
           domain-containing protein similar to SP|Q9QYI4 DnaJ
           homolog subfamily B member 12 {Mus musculus}; contains
           Pfam profile PF00226: DnaJ domain
          Length = 431

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -2

Query: 488 NSLKRT*RTNIDQTRHRSHPLPVQTRHAPVLRANPYSEVTDP 363
           N  K T  TN   T  R++P P Q  + P  + NP ++ T+P
Sbjct: 150 NFAKTTFTTNARTTTPRNNP-PAQKTNPPAQKTNPPAQKTNP 190


>At5g11770.1 68418.m01374 NADH-ubiquinone oxidoreductase 20 kDa
           subunit, mitochondrial identical to NADH-ubiquinone
           oxidoreductase 20 kDa subunit mitochondrial [precursor]
           SP:Q42577 from [Arabidopsis thaliana]; contains Pfam
           profile: PF01058 NADH ubiquinone oxidoreductase, 20 Kd
           subunit
          Length = 218

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 486 LAKTNITHEHRPDPAPVASASRPNPTRPGPQSQS 385
           +A  +++H H   PA   S S  + TRPGP S S
Sbjct: 22  VAAASVSHLHTSLPALSPSTSPTSYTRPGPPSTS 55


>At1g72520.1 68414.m08386 lipoxygenase, putative similar to
           lipoxygenase gi:1495804 [Solanum tuberosum], gi:1654140
           [Lycopersicon esculentum], GB:CAB56692 [Arabidopsis
           thaliana]
          Length = 926

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 230 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQK 132
           +S +  P  R    ++PYLPS    G RTLR+K
Sbjct: 215 QSQKDHPSKRILFTNQPYLPSETPSGLRTLREK 247


>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
           family protein contains 5 WD-40 repeats (PF00400);
           similar to guanine nucleotide-binding protein beta 5
           (GI:1001939) [Mesocricetus auratus]
          Length = 425

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +1

Query: 211 GGVRILSADLENSGEDVRGDVAPVRTH 291
           GG+++ S + ++S   +R DV+P RTH
Sbjct: 12  GGLKVESGEQKSSWPTMRFDVSPYRTH 38


>At2g02800.2 68415.m00225 protein kinase (APK2b) identical to
           protein kinase APK2b [Arabidopsis thaliana]
           gi|2852449|dbj|BAA24695
          Length = 426

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -3

Query: 457 STRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 338
           ST+PGTG     ++ D+PR S   ++ K   +++ D P LH
Sbjct: 368 STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408


>At2g02800.1 68415.m00224 protein kinase (APK2b) identical to
           protein kinase APK2b [Arabidopsis thaliana]
           gi|2852449|dbj|BAA24695
          Length = 426

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -3

Query: 457 STRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 338
           ST+PGTG     ++ D+PR S   ++ K   +++ D P LH
Sbjct: 368 STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408


>At5g22390.1 68418.m02612 expressed protein
          Length = 202

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1

Query: 109 ERSGKSFLFCLSVRVPWNPIEG 174
           + S KSFL  LS   PWNP +G
Sbjct: 17  DNSPKSFLDTLSSSSPWNPSKG 38


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,530,771
Number of Sequences: 28952
Number of extensions: 381139
Number of successful extensions: 1417
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1414
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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