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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0145
         (796 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g16980.1 68418.m01989 NADP-dependent oxidoreductase, putative...    30   2.0  
At1g76965.1 68414.m08961 glycine-rich protein                          29   2.7  
At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to ...    29   4.7  
At5g42370.1 68418.m05159 expressed protein                             29   4.7  
At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identic...    29   4.7  
At5g16970.1 68418.m01988 NADP-dependent oxidoreductase, putative...    28   6.2  
At1g72520.1 68414.m08386 lipoxygenase, putative similar to lipox...    28   6.2  
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea...    28   6.2  
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea...    28   6.2  
At2g29140.1 68415.m03542 pumilio/Puf RNA-binding domain-containi...    28   8.2  
At2g02800.2 68415.m00225 protein kinase (APK2b) identical to pro...    28   8.2  
At2g02800.1 68415.m00224 protein kinase (APK2b) identical to pro...    28   8.2  

>At5g16980.1 68418.m01989 NADP-dependent oxidoreductase, putative
           strong similarity to probable NADP-dependent
           oxidoreductase (zeta-crystallin homolog) P1
           [SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430],
           Arabidopsis thaliana
          Length = 239

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -2

Query: 585 RVRIQSET*DDFRECHIKYIQFLRPHI 505
           R+RIQ     DF + + K+++FL PHI
Sbjct: 172 RIRIQGFVVSDFYDEYSKFLEFLHPHI 198


>At1g76965.1 68414.m08961 glycine-rich protein 
          Length = 158

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 454 PGTGRIRFPSKPDTPRSSEPILIPKLRIQFAD 359
           PG   + FP KP+ P    P  +P+L + F D
Sbjct: 93  PGAAIVVFPKKPEEPVKVVPTPMPQLNLFFGD 124


>At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to
           autophagy 7 [Arabidopsis thaliana] GI:19912147; contains
           Pfam profile PF00899: ThiF family
          Length = 697

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = -1

Query: 241 PQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRR 107
           P  ++G    CG  +V NH++LL +S+ L+      ++S  +R +
Sbjct: 42  PISITGFYGPCGHPQVSNHLTLLSESLPLDEQSLIASTSHGNRNK 86


>At5g42370.1 68418.m05159 expressed protein
          Length = 447

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -2

Query: 180 PFYRIPWNSNAQAEKKTLPGPLGGVFRPL-WVTPSNTR 70
           P Y +  +   Q+ +K +P PL  + R L W TPS  R
Sbjct: 285 PLYDVTSSGLVQSVEKVVPRPLRSIVRLLFWYTPSTMR 322


>At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identical
           to low affinity calcium antiporter CAX2 (GI:1488267)
           [Arabidopsis thaliana]; Ca2+:Cation Antiporter (CaCA)
           Family member PMID:11500563
          Length = 441

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = +1

Query: 43  SIIVPSSLKTSVRRGNPKWPEDAAERSGKSFLFC--LSVRVPWNPI 174
           S++   SL TS  +  PK P+++   S K  +FC  L++ +P+ P+
Sbjct: 41  SLMEQGSLSTSFPQHTPKAPKNSVLNSIKIVIFCNKLNLLLPFGPL 86


>At5g16970.1 68418.m01988 NADP-dependent oxidoreductase, putative
           (P1) identical to probable NADP-dependent oxidoreductase
           P1, zeta-crystallin homolog [SP|Q39172][gi:886428],
           Arabidopsis thaliana; similar to allyl alcohol
           dehydrogenase [Nicotiana tabacum] GI:6692816; contains
           Pfam profile PF00107: oxidoreductase, zinc-binding
           dehydrogenase family
          Length = 345

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -2

Query: 585 RVRIQSET*DDFRECHIKYIQFLRPHI 505
           R+RIQ     DF + + K+++F+ PHI
Sbjct: 278 RIRIQGFVVSDFYDKYSKFLEFVLPHI 304


>At1g72520.1 68414.m08386 lipoxygenase, putative similar to
           lipoxygenase gi:1495804 [Solanum tuberosum], gi:1654140
           [Lycopersicon esculentum], GB:CAB56692 [Arabidopsis
           thaliana]
          Length = 926

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 236 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQK 138
           +S +  P  R    ++PYLPS    G RTLR+K
Sbjct: 215 QSQKDHPSKRILFTNQPYLPSETPSGLRTLREK 247


>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
           family protein contains 4 WD-40 repeats (PF00400);
           similar to neural cell adhesion molecule 2, large
           isoform precursor gb|M76710 from Xenopus laevis, and
           beta transducin from S. cerevisiae gb|Q05946. ESTs
           gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
           gb|H36304, and gb|N65606 come from
          Length = 793

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 17/50 (34%), Positives = 22/50 (44%)
 Frame = -3

Query: 377 TDPICRLPLPTLFYRLEALHLGDLLRIWVRTGATSPRTSLTEFSRSAESI 228
           T     LPL  L Y L   +  D  RI   +G T PR + T F  +  S+
Sbjct: 289 TSLAAELPLVPLPYLLLPSYSADDPRILYSSGTTGPRNAQTRFQSNQSSV 338


>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
           family protein contains 4 WD-40 repeats (PF00400);
           similar to neural cell adhesion molecule 2, large
           isoform precursor gb|M76710 from Xenopus laevis, and
           beta transducin from S. cerevisiae gb|Q05946. ESTs
           gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
           gb|H36304, and gb|N65606 come from
          Length = 790

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 17/50 (34%), Positives = 22/50 (44%)
 Frame = -3

Query: 377 TDPICRLPLPTLFYRLEALHLGDLLRIWVRTGATSPRTSLTEFSRSAESI 228
           T     LPL  L Y L   +  D  RI   +G T PR + T F  +  S+
Sbjct: 289 TSLAAELPLVPLPYLLLPSYSADDPRILYSSGTTGPRNAQTRFQSNQSSV 338


>At2g29140.1 68415.m03542 pumilio/Puf RNA-binding domain-containing
           protein 
          Length = 964

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 22/69 (31%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
 Frame = -2

Query: 408 GPQSQSLFRSYGSNLPTSLTYIILSTRGSS---PWRPAADMGTNRRDISTYIPHRIFKVR 238
           G Q       Y S  P S +Y    T GS+   P  P A  G     +S Y P R  +V 
Sbjct: 519 GSQKSQYGLPYKSGSPNSHSYYGSPTFGSNMSYPGSPLAHHGMPNSLMSPYSPMRRGEVN 578

Query: 237 REYPDTAAN 211
             YP    N
Sbjct: 579 MRYPAATRN 587


>At2g02800.2 68415.m00225 protein kinase (APK2b) identical to
           protein kinase APK2b [Arabidopsis thaliana]
           gi|2852449|dbj|BAA24695
          Length = 426

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -1

Query: 463 STRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 344
           ST+PGTG     ++ D+PR S   ++ K   +++ D P LH
Sbjct: 368 STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408


>At2g02800.1 68415.m00224 protein kinase (APK2b) identical to
           protein kinase APK2b [Arabidopsis thaliana]
           gi|2852449|dbj|BAA24695
          Length = 426

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -1

Query: 463 STRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 344
           ST+PGTG     ++ D+PR S   ++ K   +++ D P LH
Sbjct: 368 STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,534,351
Number of Sequences: 28952
Number of extensions: 409442
Number of successful extensions: 1238
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1238
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1794809600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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