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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0138
         (737 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-...    31   1.1  
At1g50260.1 68414.m05635 C2 domain-containing protein low simila...    30   1.4  
At2g28990.1 68415.m03526 leucine-rich repeat protein kinase, put...    30   1.8  
At5g16980.1 68418.m01989 NADP-dependent oxidoreductase, putative...    28   5.6  
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden...    28   5.6  
At5g22740.1 68418.m02656 glycosyl transferase family 2 protein s...    28   7.4  
At4g05190.1 68417.m00781 kinesin-like protein A, putative kinesi...    28   7.4  
At1g67340.1 68414.m07665 zinc finger (MYND type) family protein ...    28   7.4  
At3g47910.1 68416.m05224 expressed protein low similarity to non...    27   9.8  
At3g03650.1 68416.m00368 exostosin family protein contains Pfam ...    27   9.8  
At1g01040.1 68414.m00004 DEAD/DEAH box helicase carpel factory /...    27   9.8  

>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
           GTP-binding protein GUF1 - Saccharomyces cerevisiae,
           PIR:S50374
          Length = 661

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = -3

Query: 684 LGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETISHLCYTS 544
           LG +H  PA +I+R P PP  +S   +++++F     E    +CY S
Sbjct: 231 LGLEHVLPA-VIERIPPPPG-ISESPLRMLLFDSFFNEYKGVICYVS 275


>At1g50260.1 68414.m05635 C2 domain-containing protein low
           similarity to CLB1 [Lycopersicon esculentum] GI:2789434;
           contains Pfam profile PF00168: C2 domain
          Length = 675

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 91  RTRVLRPSADLPSRKVVSVSFRARSARFCTTAVQRSAQN 207
           R+RVLRPS  + + + +S  FR  S     T   R A N
Sbjct: 37  RSRVLRPSVKISNFRFISCGFRGNSKNLRLTDSSRKAAN 75


>At2g28990.1 68415.m03526 leucine-rich repeat protein kinase,
           putative similar to light repressible receptor protein
           kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
           contains leucine rich repeat (LRR) domains,
           Pfam:PF00560; contains protein kinase domain,
           Pfam:PF00069
          Length = 884

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +2

Query: 74  TFRTGSGPAFSGLPRIFLAVRSCRFRFVRDRHDSVRPPFNGQLRT 208
           T+ T SG       R++L+      R+  D HD +  PFNG   T
Sbjct: 179 TYVTQSGSLMMSF-RVYLSNSDASIRYADDVHDRIWSPFNGSSHT 222


>At5g16980.1 68418.m01989 NADP-dependent oxidoreductase, putative
           strong similarity to probable NADP-dependent
           oxidoreductase (zeta-crystallin homolog) P1
           [SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430],
           Arabidopsis thaliana
          Length = 239

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 98  RVRIQSET*DDFRECHIKYIQFLRPH 21
           R+RIQ     DF + + K+++FL PH
Sbjct: 172 RIRIQGFVVSDFYDEYSKFLEFLHPH 197


>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
           identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
           thaliana}
          Length = 447

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
 Frame = +1

Query: 58  SRKSSYVSDWIRTRVLRPSADLPSRKVVSVSFRARSARFCTTAVQRSAQNWHGQGESDCL 237
           ++ SSY  +WI   V     D+P   +   S    ++       +R ++ +         
Sbjct: 336 NKNSSYFVEWIPNNVKSSVCDIPPTGIKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAF 395

Query: 238 IKTKHWMALAGVDAM*FLPSXLNVN--VKKFKQ 330
           +   HW    G+D M F  +  N+N  V +++Q
Sbjct: 396 L---HWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425


>At5g22740.1 68418.m02656 glycosyl transferase family 2 protein
           similar to beta-(1-3)-glucosyl transferase GB:AAC62210
           GI:3687658 from [Bradyrhizobium japonicum], cellulose
           synthase from Agrobacterium tumeficiens [gi:710492] and
           Agrobacterium radiobacter [gi:710493]; contains Pfam
           glycosyl transferase, group 2 family protein domain
           PF00535
          Length = 534

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +2

Query: 26  ASKTVYI*YDTRENRLTFRTGSGPAFSGLPRIFLAVRSCRFRFVRDRHDSVRPPF 190
           ASK + I Y  RENR+ ++ G+     GL R +  V+ C +  + D      P F
Sbjct: 154 ASKGINIRYQIRENRVGYKAGA--LKEGLKRSY--VKHCEYVVIFDADFQPEPDF 204


>At4g05190.1 68417.m00781 kinesin-like protein A, putative kinesin
           like protein A, Arabidopsis thaliana, gb:Q07970
          Length = 790

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 648 DRAPLPPNRVSNETMKVVVFQRRSRET 568
           +RAPLP   V  E +  + F +R +ET
Sbjct: 7   NRAPLPSPNVKKEALSSIPFDKRRKET 33


>At1g67340.1 68414.m07665 zinc finger (MYND type) family protein /
           F-box family protein
          Length = 379

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = -3

Query: 699 SPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETIS 562
           S LC LG+  R PAD I+   L   R+    M  +V  R S + I+
Sbjct: 54  SILCKLGSTSRCPADFIN-VLLTCKRLKGLAMNPIVLSRLSPKAIA 98


>At3g47910.1 68416.m05224 expressed protein low similarity to
            nonmuscle myosin heavy chain (NMHC) [Homo sapiens]
            GI:189036; contains Pfam profiles PF04780: Protein of
            unknown function (DUF629), PF04781: Protein of unknown
            function (DUF627)
          Length = 1290

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -3

Query: 687  TLGTKHRAPADIIDRAPLPPNRVSNETMKVVV 592
            T+G+ HR+ AD ++ +PLP   V + +   +V
Sbjct: 972  TIGSDHRSNADSVEHSPLPVAPVGDHSEADIV 1003


>At3g03650.1 68416.m00368 exostosin family protein contains Pfam
           profile: PF03016 Exostosin family
          Length = 499

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 26/92 (28%), Positives = 37/92 (40%)
 Frame = -3

Query: 720 ATSVSATSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETISHLCYTSH 541
           + S S   PL  +   + +P +    AP P NR   ET + +   R   +T S +     
Sbjct: 49  SVSESTDVPLIIIKNSNSSPQN---NAPKPQNREGAETEEPIKENRGGTKTESSMNQNRG 105

Query: 540 XSLQCQTRVKLTGSSFPADSPKPVPLAVVSLD 445
            +L+C  RV          SP P PL V   D
Sbjct: 106 ETLRCIQRV----------SPSPRPLKVYMYD 127


>At1g01040.1 68414.m00004 DEAD/DEAH box helicase carpel factory /
           CAF identical to RNA helicase/RNAseIII CAF protein
           GB:AAF03534 GI:6102610 from [Arabidopsis thaliana]
          Length = 1909

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +3

Query: 369 GSQMPRHLISDAHEWINEIPTVPIYYLAKPQPRERAWENQRGKK 500
           G  +P + +SD +  INE+   P   +AK   +E   +   GK+
Sbjct: 70  GGGLPNNGVSDTNSQINEVTVTP-QVIAKETVKENGLQKNGGKR 112


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,703,675
Number of Sequences: 28952
Number of extensions: 319113
Number of successful extensions: 791
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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