Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0129
(598 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g76965.1 68414.m08961 glycine-rich protein 29 1.8
At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to ... 29 3.1
At5g45730.1 68418.m05622 DC1 domain-containing protein contains ... 29 3.1
At5g42370.1 68418.m05159 expressed protein 29 3.1
At5g37380.2 68418.m04492 DNAJ heat shock N-terminal domain-conta... 29 3.1
At5g37380.1 68418.m04491 DNAJ heat shock N-terminal domain-conta... 29 3.1
At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identic... 29 3.1
At1g72520.1 68414.m08386 lipoxygenase, putative similar to lipox... 28 4.1
At2g02800.2 68415.m00225 protein kinase (APK2b) identical to pro... 28 5.4
At2g02800.1 68415.m00224 protein kinase (APK2b) identical to pro... 28 5.4
At5g22390.1 68418.m02612 expressed protein 27 7.2
At4g31805.1 68417.m04519 WRKY family transcription factor identi... 27 7.2
At1g10930.1 68414.m01255 DNA helicase (RECQl4A) nearly identical... 27 7.2
At2g05210.1 68415.m00549 expressed protein 27 9.5
At2g03890.2 68415.m00352 phosphatidylinositol 3- and 4-kinase fa... 27 9.5
At2g03890.1 68415.m00351 phosphatidylinositol 3- and 4-kinase fa... 27 9.5
>At1g76965.1 68414.m08961 glycine-rich protein
Length = 158
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 415 PGTGRIRFPSKPDTPRSSEPILIPKLRIQFAD 320
PG + FP KP+ P P +P+L + F D
Sbjct: 93 PGAAIVVFPKKPEEPVKVVPTPMPQLNLFFGD 124
>At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to
autophagy 7 [Arabidopsis thaliana] GI:19912147; contains
Pfam profile PF00899: ThiF family
Length = 697
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -1
Query: 202 PQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRR 68
P ++G CG +V NH++LL +S+ L+ ++S +R +
Sbjct: 42 PISITGFYGPCGHPQVSNHLTLLSESLPLDEQSLIASTSHGNRNK 86
>At5g45730.1 68418.m05622 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 519
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = -3
Query: 392 PVQTRHAPVLRANP----YSEVTDPICRLPLPTLFYRLEALHLGDLLRIWYEPA 243
P +RH P+ + +P Y++ CR PL L Y + LR W PA
Sbjct: 68 PCHSRH-PLKKVSPETIDYTDGKCQFCRSPLVDLMYHCSICNFSVDLRCWLNPA 120
>At5g42370.1 68418.m05159 expressed protein
Length = 447
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 141 PFYRIPWNSNAQAEKKTLPGPLGGVFRPL-WVTPSNTR 31
P Y + + Q+ +K +P PL + R L W TPS R
Sbjct: 285 PLYDVTSSGLVQSVEKVVPRPLRSIVRLLFWYTPSTMR 322
>At5g37380.2 68418.m04492 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -3
Query: 455 NSLKRTLRTNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDP 330
N K T TN T R +P P Q + P + NP ++ T+P
Sbjct: 150 NFAKTTFTTNARTTTPRNNP-PAQKTNPPAQKTNPPAQKTNP 190
>At5g37380.1 68418.m04491 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -3
Query: 455 NSLKRTLRTNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDP 330
N K T TN T R +P P Q + P + NP ++ T+P
Sbjct: 150 NFAKTTFTTNARTTTPRNNP-PAQKTNPPAQKTNPPAQKTNP 190
>At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identical
to low affinity calcium antiporter CAX2 (GI:1488267)
[Arabidopsis thaliana]; Ca2+:Cation Antiporter (CaCA)
Family member PMID:11500563
Length = 441
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +1
Query: 4 SIIVPSSLKTSVRRGNPKWPEDAAERSGKSFLFC--LSVRVPWNPI 135
S++ SL TS + PK P+++ S K +FC L++ +P+ P+
Sbjct: 41 SLMEQGSLSTSFPQHTPKAPKNSVLNSIKIVIFCNKLNLLLPFGPL 86
>At1g72520.1 68414.m08386 lipoxygenase, putative similar to
lipoxygenase gi:1495804 [Solanum tuberosum], gi:1654140
[Lycopersicon esculentum], GB:CAB56692 [Arabidopsis
thaliana]
Length = 926
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 197 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQK 99
+S + P R ++PYLPS G RTLR+K
Sbjct: 215 QSQKDHPSKRILFTNQPYLPSETPSGLRTLREK 247
>At2g02800.2 68415.m00225 protein kinase (APK2b) identical to
protein kinase APK2b [Arabidopsis thaliana]
gi|2852449|dbj|BAA24695
Length = 426
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -1
Query: 424 STRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 305
ST+PGTG ++ D+PR S ++ K +++ D P LH
Sbjct: 368 STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408
>At2g02800.1 68415.m00224 protein kinase (APK2b) identical to
protein kinase APK2b [Arabidopsis thaliana]
gi|2852449|dbj|BAA24695
Length = 426
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -1
Query: 424 STRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 305
ST+PGTG ++ D+PR S ++ K +++ D P LH
Sbjct: 368 STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408
>At5g22390.1 68418.m02612 expressed protein
Length = 202
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 76 ERSGKSFLFCLSVRVPWNPIEG 141
+ S KSFL LS PWNP +G
Sbjct: 17 DNSPKSFLDTLSSSSPWNPSKG 38
>At4g31805.1 68417.m04519 WRKY family transcription factor identical
to WRKY DNA-binding protein 18 (WRKY18) GI:13506730 from
[Arabidopsis thaliana]
Length = 344
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -3
Query: 257 WYEPARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEP 147
W++ A L PE SRS P CS RS P
Sbjct: 293 WWKDAARLLAQRVPESSRSGLEWCNPDSSTCSERSVP 329
>At1g10930.1 68414.m01255 DNA helicase (RECQl4A) nearly identical to
DNA Helicase [Arabidopsis thaliana] GI:11121449
Length = 1188
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 239 HLHVHPSPEFSRSAESIRTPPQMRCSSRSE 150
H H +P+ S S S+RTPP R +SR E
Sbjct: 229 HYHSTSTPQPSVSNFSLRTPPVDRSASRLE 258
>At2g05210.1 68415.m00549 expressed protein
Length = 364
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -3
Query: 197 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPR 42
+S T C+ +E Y +GF T TLR+KR L S +F PR
Sbjct: 282 DSTATLEAFLCNKDAE-YFWGLGFQDTETLRKKRNWL--LGIRESSNFVAPR 330
>At2g03890.2 68415.m00352 phosphatidylinositol 3- and 4-kinase
family protein low similarity to phosphatidylinositol
4-kinase type-II beta [Homo sapiens] GI:20159767;
contains Pfam profile PF00454: Phosphatidylinositol 3-
and 4-kinase
Length = 530
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -1
Query: 124 MELERSGRKENSSRTSRRRLQATLGYPVEHSFLKTRERLL 5
MEL+RS ++ T +RRLQ L +P E S L + +L
Sbjct: 60 MELDRS----DNVHTVKRRLQIALNFPTEESSLTYGDMVL 95
>At2g03890.1 68415.m00351 phosphatidylinositol 3- and 4-kinase
family protein low similarity to phosphatidylinositol
4-kinase type-II beta [Homo sapiens] GI:20159767;
contains Pfam profile PF00454: Phosphatidylinositol 3-
and 4-kinase
Length = 650
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -1
Query: 124 MELERSGRKENSSRTSRRRLQATLGYPVEHSFLKTRERLL 5
MEL+RS ++ T +RRLQ L +P E S L + +L
Sbjct: 60 MELDRS----DNVHTVKRRLQIALNFPTEESSLTYGDMVL 95
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,673,599
Number of Sequences: 28952
Number of extensions: 293242
Number of successful extensions: 899
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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